RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 COX7CP15954 63 aa12.09□□□□□ -0.47
VSX2-201ENST00000261980 PIK3CD-AS1Q5SR53 167 aa12.09□□□□□ -0.47
VSX2-201ENST00000261980 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.09□□□□□ -0.47
VSX2-201ENST00000261980 WNK1Q9H4A3 2382 aa12.08□□□□□ -0.48
VSX2-201ENST00000261980 IGHG2P01859 326 aa12.08□□□□□ -0.48
VSX2-201ENST00000261980 C14orf132Q9NPU4 83 aa12.08□□□□□ -0.48
VSX2-201ENST00000261980 SETD2Q9BYW2 2564 aaPredicted RBP12.08□□□□□ -0.48
VSX2-201ENST00000261980 SPANXA1Q9NS26 97 aa12.07□□□□□ -0.48
VSX2-201ENST00000261980 A0A0J9YX75 114 aa12.06□□□□□ -0.48
VSX2-201ENST00000261980 SOSTDC1Q6X4U4 206 aa12.06□□□□□ -0.48
VSX2-201ENST00000261980 SPANXDQ9BXN6 97 aa12.06□□□□□ -0.48
VSX2-201ENST00000261980 SPANXCQ9NY87 97 aa12.06□□□□□ -0.48
VSX2-201ENST00000261980 PEMTQ9UBM1 199 aa12.06□□□□□ -0.48
VSX2-201ENST00000261980 KLLNB2CW77 178 aa12.06□□□□□ -0.48
VSX2-201ENST00000261980 OXTP01178 125 aa12.06□□□□□ -0.48
VSX2-201ENST00000261980 MED14OSP0DP75 135 aa12.06□□□□□ -0.48
VSX2-201ENST00000261980 MRPS36P82909 103 aaKnown RBP12.06□□□□□ -0.48
VSX2-201ENST00000261980 ADORA2A-AS1P86434 159 aa12.06□□□□□ -0.48
VSX2-201ENST00000261980 DEFB121Q5J5C9 76 aa12.06□□□□□ -0.48
VSX2-201ENST00000261980 FAM19A4Q96LR4 140 aa12.06□□□□□ -0.48
VSX2-201ENST00000261980 TRBV6-5A0A0K0K1A5 114 aa12.05□□□□□ -0.48
VSX2-201ENST00000261980 COX6A2Q02221 97 aa12.05□□□□□ -0.48
VSX2-201ENST00000261980 LINC00308Q8TCZ7 52 aa12.05□□□□□ -0.48
VSX2-201ENST00000261980 TRACP01848 142 aa12.05□□□□□ -0.48
VSX2-201ENST00000261980 WFDC9Q8NEX5 89 aa12.05□□□□□ -0.48
VSX2-201ENST00000261980 COX7A2LO14548 114 aa12.04□□□□□ -0.48
VSX2-201ENST00000261980 C2orf48Q96LS8 159 aa12.04□□□□□ -0.48
VSX2-201ENST00000261980 Q6ZSN1 163 aa12.04□□□□□ -0.48
VSX2-201ENST00000261980 C5orf56Q8N8D9 126 aa12.04□□□□□ -0.48
VSX2-201ENST00000261980 LINC00467Q9BRT7 94 aa12.04□□□□□ -0.48
VSX2-201ENST00000261980 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
VSX2-201ENST00000261980 ATP5G1P05496 136 aa12.03□□□□□ -0.48
VSX2-201ENST00000261980 DGAT2L7PQ6IED9 249 aa12.03□□□□□ -0.48
VSX2-201ENST00000261980 HIST1H4AP62805 103 aaKnown RBP12.03□□□□□ -0.48
VSX2-201ENST00000261980 BLCAPP62952 87 aa12.03□□□□□ -0.48
VSX2-201ENST00000261980 IMUPQ9GZP8 106 aa12.03□□□□□ -0.48
VSX2-201ENST00000261980 GNLYP22749 145 aa12.02□□□□□ -0.49
VSX2-201ENST00000261980 CCDC168Q8NDH2 2452 aa12.02□□□□□ -0.49
VSX2-201ENST00000261980 MYO9AB2RTY4 2548 aa12.02□□□□□ -0.49
VSX2-201ENST00000261980 C10orf105Q8TEF2 133 aa12.02□□□□□ -0.49
VSX2-201ENST00000261980 MINOS1-NBL1R4GNA1 71 aa12.02□□□□□ -0.49
VSX2-201ENST00000261980 DNAL4O96015 105 aa12.01□□□□□ -0.49
VSX2-201ENST00000261980 ACYP1P07311 99 aa12.01□□□□□ -0.49
VSX2-201ENST00000261980 OR13C6PQ8NH95 151 aa12.01□□□□□ -0.49
VSX2-201ENST00000261980 LINC01600Q96MT4 127 aa12.01□□□□□ -0.49
VSX2-201ENST00000261980 C22orf24Q9Y442 160 aa12.01□□□□□ -0.49
VSX2-201ENST00000261980 SONP18583 2426 aaKnown RBP12.01□□□□□ -0.49
VSX2-201ENST00000261980 SETXQ7Z333 2677 aaKnown RBP12.01□□□□□ -0.49
VSX2-201ENST00000261980 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
VSX2-201ENST00000261980 LRRC75A-AS1Q8N1F1 130 aa12.01□□□□□ -0.49
VSX2-201ENST00000261980 JMJD1CQ15652 2540 aa12.01□□□□□ -0.49
VSX2-201ENST00000261980 SLPIP03973 132 aa12□□□□□ -0.49
VSX2-201ENST00000261980 PRIMA1Q86XR5 153 aa12□□□□□ -0.49
VSX2-201ENST00000261980 IGHV1OR15-1A0A075B7D0 117 aa12□□□□□ -0.49
VSX2-201ENST00000261980 IGKV3OR2-268A0A0C4DH90 116 aa12□□□□□ -0.49
VSX2-201ENST00000261980 NDUFA4O00483 81 aa12□□□□□ -0.49
VSX2-201ENST00000261980 C9orf85Q96MD7 179 aa12□□□□□ -0.49
VSX2-201ENST00000261980 SIRPDQ9H106 197 aa12□□□□□ -0.49
VSX2-201ENST00000261980 UBR5O95071 2799 aaPredicted RBP11.99□□□□□ -0.49
VSX2-201ENST00000261980 ITPR2Q14571 2701 aa11.99□□□□□ -0.49
VSX2-201ENST00000261980 C10orf99Q6UWK7 81 aa11.99□□□□□ -0.49
VSX2-201ENST00000261980 DPH3Q96FX2 82 aa11.99□□□□□ -0.49
VSX2-201ENST00000261980 DOPEY1Q5JWR5 2465 aa11.98□□□□□ -0.49
VSX2-201ENST00000261980 HILS1P60008 231 aa11.98□□□□□ -0.49
VSX2-201ENST00000261980 C5orf38Q86SI9 138 aa11.98□□□□□ -0.49
VSX2-201ENST00000261980 ZNF843Q8N446 348 aa11.98□□□□□ -0.49
VSX2-201ENST00000261980 LINC00846Q9NV44 126 aa11.98□□□□□ -0.49
VSX2-201ENST00000261980 APRG1Q8IVJ8 170 aa11.97□□□□□ -0.49
VSX2-201ENST00000261980 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
VSX2-201ENST00000261980 NCR3O14931 201 aa11.97□□□□□ -0.49
VSX2-201ENST00000261980 ZANQ9Y493 2812 aa11.97□□□□□ -0.49
VSX2-201ENST00000261980 HIST2H2BCQ6DN03 193 aa11.97□□□□□ -0.49
VSX2-201ENST00000261980 FBN2P35556 2912 aa11.96□□□□□ -0.49
VSX2-201ENST00000261980 A0A087WYN8 130 aa11.96□□□□□ -0.49
VSX2-201ENST00000261980 ATOX1O00244 68 aa11.96□□□□□ -0.49
VSX2-201ENST00000261980 CRYGAP11844 174 aa11.96□□□□□ -0.49
VSX2-201ENST00000261980 BPESC1Q9GZL8 116 aa11.96□□□□□ -0.5
VSX2-201ENST00000261980 TOMM7Q9P0U1 55 aa11.96□□□□□ -0.5
VSX2-201ENST00000261980 RBMY1A1P0DJD3 496 aaKnown RBP11.95□□□□□ -0.5
VSX2-201ENST00000261980 RBMY1CP0DJD4 496 aa11.95□□□□□ -0.5
VSX2-201ENST00000261980 MALP21145 153 aa11.95□□□□□ -0.5
VSX2-201ENST00000261980 RBMY1FQ15415 496 aaKnown RBP11.95□□□□□ -0.5
VSX2-201ENST00000261980 F5H768 121 aa11.95□□□□□ -0.5
VSX2-201ENST00000261980 CHCHD7Q9BUK0 85 aa11.95□□□□□ -0.5
VSX2-201ENST00000261980 FAM223BA6NKX1 122 aa11.94□□□□□ -0.5
VSX2-201ENST00000261980 RPL18AQ02543 176 aaKnown RBP11.94□□□□□ -0.5
VSX2-201ENST00000261980 FAM223AQ8IWN6 122 aa11.94□□□□□ -0.5
VSX2-201ENST00000261980 RNASE1P07998 156 aaKnown RBP11.94□□□□□ -0.5
VSX2-201ENST00000261980 BEAN1Q3B7T3 259 aa11.94□□□□□ -0.5
VSX2-201ENST00000261980 NIPBLQ6KC79 2804 aaeCLIP11.94□□□□□ -0.5
VSX2-201ENST00000261980 TRAV25A0A0B4J276 109 aa11.94□□□□□ -0.5
VSX2-201ENST00000261980 FBXL19-AS1Q494R0 122 aa11.94□□□□□ -0.5
VSX2-201ENST00000261980 CFHR3Q02985 330 aa11.93□□□□□ -0.5
VSX2-201ENST00000261980 HIST2H2BDQ6DRA6 164 aa11.93□□□□□ -0.5
VSX2-201ENST00000261980 A0A1W2PPR1 153 aa11.93□□□□□ -0.5
VSX2-201ENST00000261980 MOB4Q9Y3A3 225 aa11.93□□□□□ -0.5
VSX2-201ENST00000261980 TRAV23DV6A0A075B6W5 121 aa11.92□□□□□ -0.5
VSX2-201ENST00000261980 NDUFA1O15239 70 aa11.92□□□□□ -0.5
VSX2-201ENST00000261980 USP17L23D6RBM5 183 aa11.92□□□□□ -0.5
VSX2-201ENST00000261980 LINC01561Q8N1V8 128 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms