RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 IGHV3-38A0A0C4DH36 116 aa12.54□□□□□ -0.4
SSB-201ENST00000260956 K7EIL1 84 aa12.54□□□□□ -0.4
SSB-201ENST00000260956 NAA38Q9BRA0 125 aaKnown RBP12.54□□□□□ -0.4
SSB-201ENST00000260956 C1QTNF4Q9BXJ3 329 aa12.54□□□□□ -0.4
SSB-201ENST00000260956 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.54□□□□□ -0.4
SSB-201ENST00000260956 A0A1W2PPM0 123 aa12.54□□□□□ -0.4
SSB-201ENST00000260956 IGKV2-29A2NJV5 120 aaPredicted RBP12.54□□□□□ -0.4
SSB-201ENST00000260956 K7EQD1 137 aa12.54□□□□□ -0.4
SSB-201ENST00000260956 LEPROTO15243 131 aa12.54□□□□□ -0.4
SSB-201ENST00000260956 COTL1Q14019 142 aa12.54□□□□□ -0.4
SSB-201ENST00000260956 Q6ZUT4 128 aa12.54□□□□□ -0.4
SSB-201ENST00000260956 SBSPONQ8IVN8 264 aa12.54□□□□□ -0.4
SSB-201ENST00000260956 NHP2Q9NX24 153 aaKnown RBP12.54□□□□□ -0.4
SSB-201ENST00000260956 J3QQQ9 107 aa12.53□□□□□ -0.4
SSB-201ENST00000260956 K7EP34 96 aa12.53□□□□□ -0.4
SSB-201ENST00000260956 RAB37Q96AX2 223 aa12.53□□□□□ -0.4
SSB-201ENST00000260956 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
SSB-201ENST00000260956 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
SSB-201ENST00000260956 SPANXB1Q9NS25 103 aaPredicted RBP12.53□□□□□ -0.4
SSB-201ENST00000260956 UBE2D3P61077 147 aa12.52□□□□□ -0.41
SSB-201ENST00000260956 UBE2D2P62837 147 aa12.52□□□□□ -0.41
SSB-201ENST00000260956 C12orf74Q32Q52 190 aa12.51□□□□□ -0.41
SSB-201ENST00000260956 NTM-AS1Q6ZSK4 140 aa12.51□□□□□ -0.41
SSB-201ENST00000260956 SLC25A29Q8N8R3 303 aa12.51□□□□□ -0.41
SSB-201ENST00000260956 TINCRA0A1B0GVN0 87 aa12.5□□□□□ -0.41
SSB-201ENST00000260956 LINC00694P0DN24 101 aa12.5□□□□□ -0.41
SSB-201ENST00000260956 UBE2D1P51668 147 aa12.5□□□□□ -0.41
SSB-201ENST00000260956 LINC00612Q8N6U2 182 aa12.5□□□□□ -0.41
SSB-201ENST00000260956 RNASE13Q5GAN3 156 aaKnown RBP12.49□□□□□ -0.41
SSB-201ENST00000260956 IGLV5-45A0A087WSX0 123 aa12.48□□□□□ -0.41
SSB-201ENST00000260956 RRN3P1Q2M238 152 aa12.48□□□□□ -0.41
SSB-201ENST00000260956 IGLL5B9A064 214 aa12.48□□□□□ -0.41
SSB-201ENST00000260956 CIDEAO60543 219 aa12.48□□□□□ -0.41
SSB-201ENST00000260956 RPL36AP83881 106 aaKnown RBP12.48□□□□□ -0.41
SSB-201ENST00000260956 DAZ4Q86SG3 579 aaKnown RBP12.48□□□□□ -0.41
SSB-201ENST00000260956 RPL36ALQ969Q0 106 aaKnown RBP12.48□□□□□ -0.41
SSB-201ENST00000260956 DAZ3Q9NR90 486 aaKnown RBP12.48□□□□□ -0.41
SSB-201ENST00000260956 IGHV3-30P01768 117 aa12.47□□□□□ -0.41
SSB-201ENST00000260956 IGHV3-30-5P0DP03 117 aa12.47□□□□□ -0.41
SSB-201ENST00000260956 SCGB1D4Q6XE38 83 aa12.47□□□□□ -0.41
SSB-201ENST00000260956 FAM19A3Q7Z5A8 133 aa12.47□□□□□ -0.41
SSB-201ENST00000260956 CSDC2Q9Y534 153 aaKnown RBP12.47□□□□□ -0.41
SSB-201ENST00000260956 DNAH9Q9NYC9 4486 aa12.46□□□□□ -0.41
SSB-201ENST00000260956 TRBV6-4A0A1B0GX49 114 aa12.46□□□□□ -0.41
SSB-201ENST00000260956 GAGE12BA1L429 117 aa12.46□□□□□ -0.41
SSB-201ENST00000260956 GAGE10A6NGK3 116 aa12.46□□□□□ -0.41
SSB-201ENST00000260956 GAGE7O76087 117 aa12.46□□□□□ -0.41
SSB-201ENST00000260956 GAGE12FP0CL80 117 aa12.46□□□□□ -0.41
SSB-201ENST00000260956 GAGE12GP0CL81 117 aa12.46□□□□□ -0.41
SSB-201ENST00000260956 GAGE12IP0CL82 117 aa12.46□□□□□ -0.41
SSB-201ENST00000260956 C10orf126Q8N4M7 172 aa12.46□□□□□ -0.41
SSB-201ENST00000260956 MRAPQ8TCY5 172 aa12.46□□□□□ -0.41
SSB-201ENST00000260956 NBEAL2Q6ZNJ1 2754 aa12.46□□□□□ -0.41
SSB-201ENST00000260956 IGHV3-30-3P0DP02 117 aa12.45□□□□□ -0.42
SSB-201ENST00000260956 LGALS3P17931 250 aaKnown RBP12.45□□□□□ -0.42
SSB-201ENST00000260956 GTF2H5Q6ZYL4 71 aa12.45□□□□□ -0.42
SSB-201ENST00000260956 SPCS1Q9Y6A9 102 aa12.45□□□□□ -0.42
SSB-201ENST00000260956 X6R8D5 127 aa12.45□□□□□ -0.42
SSB-201ENST00000260956 TIRAPP58753 221 aa12.44□□□□□ -0.42
SSB-201ENST00000260956 FHL2Q14192 279 aa12.44□□□□□ -0.42
SSB-201ENST00000260956 GTSF1LQ9H1H1 148 aa12.44□□□□□ -0.42
SSB-201ENST00000260956 IGHV1-58A0A0C4DH39 117 aa12.43□□□□□ -0.42
SSB-201ENST00000260956 GAGE12JA6NER3 117 aa12.43□□□□□ -0.42
SSB-201ENST00000260956 FABP2P12104 132 aa12.43□□□□□ -0.42
SSB-201ENST00000260956 GAGE4Q13068 117 aa12.43□□□□□ -0.42
SSB-201ENST00000260956 GAGE5Q13069 117 aa12.43□□□□□ -0.42
SSB-201ENST00000260956 GAGE13Q4V321 117 aa12.43□□□□□ -0.42
SSB-201ENST00000260956 DEFB121Q5J5C9 76 aa12.43□□□□□ -0.42
SSB-201ENST00000260956 LITAFQ99732 161 aa12.43□□□□□ -0.42
SSB-201ENST00000260956 TRAV8-3A0A0A6YYJ7 113 aa12.42□□□□□ -0.42
SSB-201ENST00000260956 LOC100131303A0A0U1RQF7 123 aa12.42□□□□□ -0.42
SSB-201ENST00000260956 KIR2DL5BQ8NHK3 375 aa12.42□□□□□ -0.42
SSB-201ENST00000260956 VSIG2Q96IQ7 327 aa12.42□□□□□ -0.42
SSB-201ENST00000260956 IGHV3-64A0A075B6Q5 118 aa12.42□□□□□ -0.42
SSB-201ENST00000260956 TRGV2A0A075B6R0 118 aa12.41□□□□□ -0.42
SSB-201ENST00000260956 EIF4EBP3O60516 100 aaPredicted RBP12.41□□□□□ -0.42
SSB-201ENST00000260956 A0A0J9YXY3 114 aa12.4□□□□□ -0.42
SSB-201ENST00000260956 SRSF9Q13242 221 aaKnown RBP eCLIP12.4□□□□□ -0.42
SSB-201ENST00000260956 TENM3Q9P273 2699 aa12.4□□□□□ -0.42
SSB-201ENST00000260956 TMEM238LA0A1B0GVL6 79 aa12.4□□□□□ -0.43
SSB-201ENST00000260956 A6NJY4 79 aa12.4□□□□□ -0.43
SSB-201ENST00000260956 LINC00242Q5T6M2 205 aa12.4□□□□□ -0.43
SSB-201ENST00000260956 CDKN2A-AS1Q9UH64 79 aa12.4□□□□□ -0.43
SSB-201ENST00000260956 IGLV5-39A0A0G2JS06 123 aa12.39□□□□□ -0.43
SSB-201ENST00000260956 COX6A2Q02221 97 aa12.39□□□□□ -0.43
SSB-201ENST00000260956 CDC42SE2Q9NRR3 84 aa12.39□□□□□ -0.43
SSB-201ENST00000260956 IGHV4-30-4P0DP06 118 aa12.38□□□□□ -0.43
SSB-201ENST00000260956 ZFAND6Q6FIF0 208 aa12.38□□□□□ -0.43
SSB-201ENST00000260956 SPINK8P0C7L1 97 aa12.37□□□□□ -0.43
SSB-201ENST00000260956 SMIM9A6NGZ8 99 aa12.37□□□□□ -0.43
SSB-201ENST00000260956 H7C423 109 aa12.37□□□□□ -0.43
SSB-201ENST00000260956 CFC1BP0CG36 223 aa12.37□□□□□ -0.43
SSB-201ENST00000260956 CFC1P0CG37 223 aa12.37□□□□□ -0.43
SSB-201ENST00000260956 TMEM243Q9BU79 118 aa12.37□□□□□ -0.43
SSB-201ENST00000260956 A8MZ25 164 aa12.36□□□□□ -0.43
SSB-201ENST00000260956 TSPAN13O95857 204 aa12.36□□□□□ -0.43
SSB-201ENST00000260956 HUWE1Q7Z6Z7 4374 aaKnown RBP12.36□□□□□ -0.43
SSB-201ENST00000260956 STAB2Q8WWQ8 2551 aa12.36□□□□□ -0.43
SSB-201ENST00000260956 TRGV4A0A0C4DH28 118 aa12.35□□□□□ -0.43
SSB-201ENST00000260956 RBX1P62877 108 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms