RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 MGAM2Q2M2H8 2515 aa15.78■□□□□ 0.12
SIX3-201ENST00000260653 MDFIQ99750 246 aa15.77■□□□□ 0.12
SIX3-201ENST00000260653 IGLV4-3A0A075B6K6 122 aa15.76■□□□□ 0.11
SIX3-201ENST00000260653 SMAGPQ0VAQ4 97 aa15.76■□□□□ 0.11
SIX3-201ENST00000260653 RETNQ9HD89 108 aa15.76■□□□□ 0.11
SIX3-201ENST00000260653 NTM-AS1Q6ZSK4 140 aa15.76■□□□□ 0.11
SIX3-201ENST00000260653 PRADC1Q9BSG0 188 aa15.76■□□□□ 0.11
SIX3-201ENST00000260653 HNRNPA3P51991 378 aaKnown RBP15.75■□□□□ 0.11
SIX3-201ENST00000260653 FAM104AQ969W3 186 aa15.75■□□□□ 0.11
SIX3-201ENST00000260653 PYGO1Q9Y3Y4 419 aa15.75■□□□□ 0.11
SIX3-201ENST00000260653 SLC25A34Q6PIV7 304 aa15.74■□□□□ 0.11
SIX3-201ENST00000260653 UBE2D4Q9Y2X8 147 aa15.74■□□□□ 0.11
SIX3-201ENST00000260653 IGLV4-69A0A075B6H9 119 aa15.74■□□□□ 0.11
SIX3-201ENST00000260653 COX8AP10176 69 aa15.74■□□□□ 0.11
SIX3-201ENST00000260653 IGKV2D-26A0A0A0MRZ7 120 aa15.73■□□□□ 0.11
SIX3-201ENST00000260653 NMUP48645 174 aa15.73■□□□□ 0.11
SIX3-201ENST00000260653 DAD1P61803 113 aa15.73■□□□□ 0.11
SIX3-201ENST00000260653 SIGMAR1Q99720 223 aa15.72■□□□□ 0.11
SIX3-201ENST00000260653 GTSF1LQ9H1H1 148 aa15.72■□□□□ 0.11
SIX3-201ENST00000260653 GEMIN7Q9H840 131 aaKnown RBP15.72■□□□□ 0.11
SIX3-201ENST00000260653 PRB2P02812 416 aaPredicted RBP15.71■□□□□ 0.11
SIX3-201ENST00000260653 LINC00694P0DN24 101 aa15.71■□□□□ 0.11
SIX3-201ENST00000260653 RNASE13Q5GAN3 156 aaKnown RBP15.71■□□□□ 0.11
SIX3-201ENST00000260653 SPANXA1Q9NS26 97 aa15.71■□□□□ 0.11
SIX3-201ENST00000260653 TENM3Q9P273 2699 aa15.7■□□□□ 0.1
SIX3-201ENST00000260653 C11orf86A6NJI1 115 aa15.7■□□□□ 0.1
SIX3-201ENST00000260653 FGF6P10767 208 aa15.7■□□□□ 0.1
SIX3-201ENST00000260653 PCP2Q8IVA1 136 aa15.7■□□□□ 0.1
SIX3-201ENST00000260653 MTURNQ8N3F0 131 aa15.7■□□□□ 0.1
SIX3-201ENST00000260653 SPART-AS1P0CW21 52 aa15.7■□□□□ 0.1
SIX3-201ENST00000260653 PRO0255Q9UI72 69 aa15.7■□□□□ 0.1
SIX3-201ENST00000260653 GYPEP15421 78 aa15.69■□□□□ 0.1
SIX3-201ENST00000260653 PAPPA-AS1Q5QFB9 102 aa15.68■□□□□ 0.1
SIX3-201ENST00000260653 Q6ZUT4 128 aa15.68■□□□□ 0.1
SIX3-201ENST00000260653 AMELXQ99217 191 aa15.68■□□□□ 0.1
SIX3-201ENST00000260653 TTTY13Q9BZ97 58 aa15.68■□□□□ 0.1
SIX3-201ENST00000260653 HINT1P49773 126 aaPredicted RBP15.67■□□□□ 0.1
SIX3-201ENST00000260653 SBSPONQ8IVN8 264 aa15.67■□□□□ 0.1
SIX3-201ENST00000260653 MRPS16Q9Y3D3 137 aaKnown RBP15.66■□□□□ 0.1
SIX3-201ENST00000260653 ATP5G1P05496 136 aa15.65■□□□□ 0.1
SIX3-201ENST00000260653 A0A0J9YY99 117 aa15.65■□□□□ 0.1
SIX3-201ENST00000260653 PAX4O43316 350 aa15.65■□□□□ 0.1
SIX3-201ENST00000260653 SMIM20Q8N5G0 67 aa15.65■□□□□ 0.1
SIX3-201ENST00000260653 M0QXV9 152 aa15.64■□□□□ 0.09
SIX3-201ENST00000260653 TMEM243Q9BU79 118 aa15.64■□□□□ 0.09
SIX3-201ENST00000260653 CHAC1Q9BUX1 264 aa15.64■□□□□ 0.09
SIX3-201ENST00000260653 TIMM21Q9BVV7 248 aa15.64■□□□□ 0.09
SIX3-201ENST00000260653 TRBV25-1A0A075B6N4 114 aa15.64■□□□□ 0.09
SIX3-201ENST00000260653 C2orf91Q6ZV80 131 aa15.64■□□□□ 0.09
SIX3-201ENST00000260653 VSIG2Q96IQ7 327 aa15.64■□□□□ 0.09
SIX3-201ENST00000260653 A0A0J9YXV3 536 aa15.63■□□□□ 0.09
SIX3-201ENST00000260653 DGAT2L7PQ6IED9 249 aa15.63■□□□□ 0.09
SIX3-201ENST00000260653 NFE4Q86UQ8 179 aa15.63■□□□□ 0.09
SIX3-201ENST00000260653 HTN3P15516 51 aa15.63■□□□□ 0.09
SIX3-201ENST00000260653 TRBV6-8A0A0A6YYG3 113 aa15.62■□□□□ 0.09
SIX3-201ENST00000260653 TMEM170BQ5T4T1 132 aa15.62■□□□□ 0.09
SIX3-201ENST00000260653 F5H768 121 aa15.62■□□□□ 0.09
SIX3-201ENST00000260653 MRPS36P82909 103 aaKnown RBP15.62■□□□□ 0.09
SIX3-201ENST00000260653 ATP6V0E2Q8NHE4 81 aa15.62■□□□□ 0.09
SIX3-201ENST00000260653 TRAV8-6A0A0B4J262 113 aa15.61■□□□□ 0.09
SIX3-201ENST00000260653 A0A096LPF7 62 aa15.61■□□□□ 0.09
SIX3-201ENST00000260653 UBE2L6O14933 153 aa15.61■□□□□ 0.09
SIX3-201ENST00000260653 AMMECR1LQ6DCA0 310 aa15.61■□□□□ 0.09
SIX3-201ENST00000260653 K7EIL1 84 aa15.6■□□□□ 0.09
SIX3-201ENST00000260653 E9PLD3 99 aa15.59■□□□□ 0.09
SIX3-201ENST00000260653 C12orf74Q32Q52 190 aa15.59■□□□□ 0.09
SIX3-201ENST00000260653 CSDC2Q9Y534 153 aaKnown RBP15.59■□□□□ 0.09
SIX3-201ENST00000260653 TEX48A0A1B0GUV7 120 aa15.59■□□□□ 0.09
SIX3-201ENST00000260653 ZNF22P17026 224 aaPredicted RBP15.58■□□□□ 0.09
SIX3-201ENST00000260653 MAPKAPK5-AS1Q8N8E1 139 aa15.58■□□□□ 0.09
SIX3-201ENST00000260653 GAGE6Q13070 117 aa15.57■□□□□ 0.08
SIX3-201ENST00000260653 KPRPQ5T749 579 aaPredicted RBP15.57■□□□□ 0.08
SIX3-201ENST00000260653 OR5A1Q8NGJ0 315 aa15.57■□□□□ 0.08
SIX3-201ENST00000260653 C11orf68Q9H3H3 251 aaKnown RBP15.57■□□□□ 0.08
SIX3-201ENST00000260653 MPV17L2Q567V2 206 aa15.56■□□□□ 0.08
SIX3-201ENST00000260653 TMEM97Q5BJF2 176 aa15.56■□□□□ 0.08
SIX3-201ENST00000260653 CHCHD5Q9BSY4 110 aa15.56■□□□□ 0.08
SIX3-201ENST00000260653 CDC42SE2Q9NRR3 84 aa15.56■□□□□ 0.08
SIX3-201ENST00000260653 HERVK_113P61574 105 aa15.56■□□□□ 0.08
SIX3-201ENST00000260653 C5orf47Q569G3 176 aa15.56■□□□□ 0.08
SIX3-201ENST00000260653 H7C423 109 aa15.55■□□□□ 0.08
SIX3-201ENST00000260653 UBE2D1P51668 147 aa15.55■□□□□ 0.08
SIX3-201ENST00000260653 A0A0J9YWU9 116 aa15.55■□□□□ 0.08
SIX3-201ENST00000260653 DEFB121Q5J5C9 76 aa15.54■□□□□ 0.08
SIX3-201ENST00000260653 TMEM101Q96IK0 257 aa15.54■□□□□ 0.08
SIX3-201ENST00000260653 TINCRA0A1B0GVN0 87 aa15.53■□□□□ 0.08
SIX3-201ENST00000260653 TMEM223A0PJW6 202 aa15.53■□□□□ 0.08
SIX3-201ENST00000260653 TAX1BP3O14907 124 aa15.53■□□□□ 0.08
SIX3-201ENST00000260653 MRAPQ8TCY5 172 aa15.53■□□□□ 0.08
SIX3-201ENST00000260653 TSPEAR-AS2P59090 65 aa15.52■□□□□ 0.07
SIX3-201ENST00000260653 Q6ZTC4 211 aa15.52■□□□□ 0.07
SIX3-201ENST00000260653 IGHV3-64A0A075B6Q5 118 aa15.51■□□□□ 0.07
SIX3-201ENST00000260653 IGLV4-60A0A075B6I1 120 aa15.51■□□□□ 0.07
SIX3-201ENST00000260653 TRAV13-1A0A0B4J241 112 aa15.5■□□□□ 0.07
SIX3-201ENST00000260653 MYMXA0A1B0GTQ4 84 aa15.5■□□□□ 0.07
SIX3-201ENST00000260653 SPATA25Q9BR10 227 aa15.49■□□□□ 0.07
SIX3-201ENST00000260653 HSD52Q0P140 79 aa15.49■□□□□ 0.07
SIX3-201ENST00000260653 MRPL23Q16540 153 aaKnown RBP15.49■□□□□ 0.07
SIX3-201ENST00000260653 BVES-AS1Q5T3Y7 98 aa15.49■□□□□ 0.07
SIX3-201ENST00000260653 LINC00242Q5T6M2 205 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms