RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 K7EMI3 77 aa11.69□□□□□ -0.54
SDCBP-201ENST00000260130 FXYD2P54710 66 aa11.69□□□□□ -0.54
SDCBP-201ENST00000260130 VSIG2Q96IQ7 327 aa11.69□□□□□ -0.54
SDCBP-201ENST00000260130 TRAV12-1A0A0B4J245 112 aa11.68□□□□□ -0.54
SDCBP-201ENST00000260130 TAL2Q16559 108 aa11.68□□□□□ -0.54
SDCBP-201ENST00000260130 CEND1Q8N111 149 aa11.68□□□□□ -0.54
SDCBP-201ENST00000260130 C20orf78Q9BR46 151 aa11.68□□□□□ -0.54
SDCBP-201ENST00000260130 TM2D2Q9BX73 214 aa11.68□□□□□ -0.54
SDCBP-201ENST00000260130 TTTY13Q9BZ97 58 aa11.68□□□□□ -0.54
SDCBP-201ENST00000260130 PRO0255Q9UI72 69 aa11.68□□□□□ -0.54
SDCBP-201ENST00000260130 TRGV4A0A0C4DH28 118 aa11.68□□□□□ -0.54
SDCBP-201ENST00000260130 MED14OSP0DP75 135 aa11.68□□□□□ -0.54
SDCBP-201ENST00000260130 H7C1H1 209 aa11.67□□□□□ -0.54
SDCBP-201ENST00000260130 DPH3P1Q9H4G8 78 aa11.67□□□□□ -0.54
SDCBP-201ENST00000260130 MUC4Q99102 2169 aa11.67□□□□□ -0.54
SDCBP-201ENST00000260130 PAX4O43316 350 aa11.67□□□□□ -0.54
SDCBP-201ENST00000260130 F8VRH5 84 aa11.66□□□□□ -0.54
SDCBP-201ENST00000260130 CRYBA4P53673 196 aa11.66□□□□□ -0.54
SDCBP-201ENST00000260130 SUMO2P61956 95 aaKnown RBP11.66□□□□□ -0.54
SDCBP-201ENST00000260130 PIK3CD-AS1Q5SR53 167 aa11.66□□□□□ -0.54
SDCBP-201ENST00000260130 UBE2DNLQ8IWF7 75 aa11.66□□□□□ -0.54
SDCBP-201ENST00000260130 PHLDA3Q9Y5J5 127 aa11.66□□□□□ -0.54
SDCBP-201ENST00000260130 M0R381 172 aa11.65□□□□□ -0.54
SDCBP-201ENST00000260130 RS1O15537 224 aa11.65□□□□□ -0.54
SDCBP-201ENST00000260130 CFAP126Q5VTH2 177 aa11.65□□□□□ -0.54
SDCBP-201ENST00000260130 TOMM6Q96B49 74 aa11.65□□□□□ -0.54
SDCBP-201ENST00000260130 PPP1R17O96001 155 aa11.65□□□□□ -0.54
SDCBP-201ENST00000260130 NEGR1Q7Z3B1 354 aa11.65□□□□□ -0.54
SDCBP-201ENST00000260130 SCGB3A1Q96QR1 104 aa11.65□□□□□ -0.54
SDCBP-201ENST00000260130 CIDEAO60543 219 aa11.64□□□□□ -0.55
SDCBP-201ENST00000260130 NHP2Q9NX24 153 aaKnown RBP11.64□□□□□ -0.55
SDCBP-201ENST00000260130 SYT8Q8NBV8 401 aa11.64□□□□□ -0.55
SDCBP-201ENST00000260130 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
SDCBP-201ENST00000260130 A0A096LPF7 62 aa11.63□□□□□ -0.55
SDCBP-201ENST00000260130 A8MWV9 139 aa11.63□□□□□ -0.55
SDCBP-201ENST00000260130 CCL18P55774 89 aa11.63□□□□□ -0.55
SDCBP-201ENST00000260130 MAPKAPK5-AS1Q8N8E1 139 aa11.63□□□□□ -0.55
SDCBP-201ENST00000260130 C14orf178Q8N769 122 aaPredicted RBP11.62□□□□□ -0.55
SDCBP-201ENST00000260130 ICOSQ9Y6W8 199 aa11.62□□□□□ -0.55
SDCBP-201ENST00000260130 DNAH6Q9C0G6 4158 aa11.61□□□□□ -0.55
SDCBP-201ENST00000260130 IGHV3-73A0A0B4J1V6 119 aa11.61□□□□□ -0.55
SDCBP-201ENST00000260130 K7ERJ3 54 aa11.61□□□□□ -0.55
SDCBP-201ENST00000260130 MGPP08493 103 aa11.61□□□□□ -0.55
SDCBP-201ENST00000260130 NEXN-AS1Q8NBZ9 246 aa11.61□□□□□ -0.55
SDCBP-201ENST00000260130 HIST1H4GQ99525 98 aa11.61□□□□□ -0.55
SDCBP-201ENST00000260130 RPL39LQ96EH5 51 aaKnown RBP11.61□□□□□ -0.55
SDCBP-201ENST00000260130 JPT2Q9H910 190 aa11.61□□□□□ -0.55
SDCBP-201ENST00000260130 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
SDCBP-201ENST00000260130 ESRGQ1W209 222 aa11.6□□□□□ -0.55
SDCBP-201ENST00000260130 C2orf66Q6UXQ4 117 aa11.6□□□□□ -0.55
SDCBP-201ENST00000260130 ZFP2Q6ZN57 461 aa11.6□□□□□ -0.55
SDCBP-201ENST00000260130 LINC00588Q9Y4M8 146 aa11.6□□□□□ -0.55
SDCBP-201ENST00000260130 MYMXA0A1B0GTQ4 84 aa11.6□□□□□ -0.55
SDCBP-201ENST00000260130 GYPEP15421 78 aa11.6□□□□□ -0.55
SDCBP-201ENST00000260130 LINC01549A6NIU2 74 aa11.59□□□□□ -0.55
SDCBP-201ENST00000260130 E9PLD3 99 aa11.59□□□□□ -0.55
SDCBP-201ENST00000260130 SLC25A29Q8N8R3 303 aa11.59□□□□□ -0.55
SDCBP-201ENST00000260130 TRBV6-4A0A1B0GX49 114 aa11.58□□□□□ -0.56
SDCBP-201ENST00000260130 K7EQD1 137 aa11.58□□□□□ -0.56
SDCBP-201ENST00000260130 NXPH4O95158 308 aa11.58□□□□□ -0.56
SDCBP-201ENST00000260130 BAALCQ8WXS3 180 aa11.58□□□□□ -0.56
SDCBP-201ENST00000260130 RPL32P62910 135 aaKnown RBP11.57□□□□□ -0.56
SDCBP-201ENST00000260130 TRBV7-3A0A075B6L6 115 aa11.57□□□□□ -0.56
SDCBP-201ENST00000260130 LOC100131303A0A0U1RQF7 123 aa11.57□□□□□ -0.56
SDCBP-201ENST00000260130 PRADC1Q9BSG0 188 aa11.57□□□□□ -0.56
SDCBP-201ENST00000260130 RHODO00212 210 aa11.56□□□□□ -0.56
SDCBP-201ENST00000260130 RHOHQ15669 191 aa11.56□□□□□ -0.56
SDCBP-201ENST00000260130 FAM74A4Q5TZK3 123 aa11.56□□□□□ -0.56
SDCBP-201ENST00000260130 Q6ZSN1 163 aa11.56□□□□□ -0.56
SDCBP-201ENST00000260130 ZNRF2Q8NHG8 242 aa11.56□□□□□ -0.56
SDCBP-201ENST00000260130 NACAE9PAV3 2078 aa11.56□□□□□ -0.56
SDCBP-201ENST00000260130 A0A087WWL8 130 aa11.55□□□□□ -0.56
SDCBP-201ENST00000260130 PRSS29PA6NIE9 313 aa11.55□□□□□ -0.56
SDCBP-201ENST00000260130 CRYGDP07320 174 aa11.55□□□□□ -0.56
SDCBP-201ENST00000260130 F8W1H4 67 aa11.55□□□□□ -0.56
SDCBP-201ENST00000260130 LYPD5Q6UWN5 251 aa11.55□□□□□ -0.56
SDCBP-201ENST00000260130 CYSLTR1Q9Y271 337 aa11.55□□□□□ -0.56
SDCBP-201ENST00000260130 A0A1B0GWB2 263 aa11.54□□□□□ -0.56
SDCBP-201ENST00000260130 RPL24P83731 157 aaKnown RBP11.54□□□□□ -0.56
SDCBP-201ENST00000260130 PAPPA-AS1Q5QFB9 102 aa11.54□□□□□ -0.56
SDCBP-201ENST00000260130 UPK3BQ9BT76 320 aa11.54□□□□□ -0.56
SDCBP-201ENST00000260130 M0R2N4 97 aa11.54□□□□□ -0.56
SDCBP-201ENST00000260130 SH2D6Q7Z4S9 175 aa11.54□□□□□ -0.56
SDCBP-201ENST00000260130 KIF25-AS1Q9Y6Z4 181 aa11.54□□□□□ -0.56
SDCBP-201ENST00000260130 Q9H8V8 135 aa11.53□□□□□ -0.56
SDCBP-201ENST00000260130 TMEM238LA0A1B0GVL6 79 aa11.52□□□□□ -0.57
SDCBP-201ENST00000260130 A6NJY4 79 aa11.52□□□□□ -0.57
SDCBP-201ENST00000260130 LINC00315P59091 139 aa11.52□□□□□ -0.57
SDCBP-201ENST00000260130 ZNF815PA8K554 130 aa11.51□□□□□ -0.57
SDCBP-201ENST00000260130 HERVK_113P61574 105 aa11.51□□□□□ -0.57
SDCBP-201ENST00000260130 DNAH2Q9P225 4427 aa11.51□□□□□ -0.57
SDCBP-201ENST00000260130 VCYO14598 125 aa11.51□□□□□ -0.57
SDCBP-201ENST00000260130 POLR2KP53803 58 aaKnown RBP11.51□□□□□ -0.57
SDCBP-201ENST00000260130 TMEM141Q96I45 108 aa11.51□□□□□ -0.57
SDCBP-201ENST00000260130 KIR2DL4Q99706 377 aa11.51□□□□□ -0.57
SDCBP-201ENST00000260130 DNAH10Q8IVF4 4471 aa11.5□□□□□ -0.57
SDCBP-201ENST00000260130 SUMO4Q6EEV6 95 aa11.5□□□□□ -0.57
SDCBP-201ENST00000260130 SCGB1D4Q6XE38 83 aa11.5□□□□□ -0.57
SDCBP-201ENST00000260130 Q6ZR54 194 aa11.5□□□□□ -0.57
SDCBP-201ENST00000260130 J3QR89 54 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms