RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 DPM2O94777 84 aa11.63□□□□□ -0.55
HLA-F-216ENST00000259951 ZNF25P17030 456 aaPredicted RBP11.63□□□□□ -0.55
HLA-F-216ENST00000259951 PLNP26678 52 aa11.63□□□□□ -0.55
HLA-F-216ENST00000259951 ATOH7Q8N100 152 aa11.63□□□□□ -0.55
HLA-F-216ENST00000259951 CST9LQ9H4G1 147 aa11.63□□□□□ -0.55
HLA-F-216ENST00000259951 TRAV9-2A0A087WT02 112 aa11.62□□□□□ -0.55
HLA-F-216ENST00000259951 LINC00587B1AMM8 73 aa11.62□□□□□ -0.55
HLA-F-216ENST00000259951 MRPL35Q9NZE8 188 aaKnown RBP11.62□□□□□ -0.55
HLA-F-216ENST00000259951 IGKCP01834 107 aa11.61□□□□□ -0.55
HLA-F-216ENST00000259951 TIRAPP58753 221 aa11.61□□□□□ -0.55
HLA-F-216ENST00000259951 CEMP1Q6PRD7 247 aaPredicted RBP11.61□□□□□ -0.55
HLA-F-216ENST00000259951 OR5A1Q8NGJ0 315 aa11.61□□□□□ -0.55
HLA-F-216ENST00000259951 OPRPNQ99935 248 aaPredicted RBP11.61□□□□□ -0.55
HLA-F-216ENST00000259951 AMELXQ99217 191 aa11.6□□□□□ -0.55
HLA-F-216ENST00000259951 C2orf88Q9BSF0 95 aa11.6□□□□□ -0.55
HLA-F-216ENST00000259951 GAGE6Q13070 117 aa11.6□□□□□ -0.55
HLA-F-216ENST00000259951 LELP1Q5T871 98 aa11.6□□□□□ -0.55
HLA-F-216ENST00000259951 Q6ZUT4 128 aa11.59□□□□□ -0.55
HLA-F-216ENST00000259951 C15orf53Q8NAA6 179 aa11.59□□□□□ -0.55
HLA-F-216ENST00000259951 PAM16Q9Y3D7 125 aa11.59□□□□□ -0.55
HLA-F-216ENST00000259951 ZNF664Q8N3J9 261 aa11.58□□□□□ -0.56
HLA-F-216ENST00000259951 DDTP30046 118 aa11.57□□□□□ -0.56
HLA-F-216ENST00000259951 SPATA45Q537H7 98 aa11.57□□□□□ -0.56
HLA-F-216ENST00000259951 LYPD5Q6UWN5 251 aa11.57□□□□□ -0.56
HLA-F-216ENST00000259951 FAM104AQ969W3 186 aa11.57□□□□□ -0.56
HLA-F-216ENST00000259951 PRO1933Q9H354 126 aa11.57□□□□□ -0.56
HLA-F-216ENST00000259951 CDC42SE2Q9NRR3 84 aa11.57□□□□□ -0.56
HLA-F-216ENST00000259951 A0A1B0GUV1 79 aa11.57□□□□□ -0.56
HLA-F-216ENST00000259951 TMEM262E9PQX1 116 aa11.57□□□□□ -0.56
HLA-F-216ENST00000259951 ZC2HC1BQ5TFG8 222 aa11.57□□□□□ -0.56
HLA-F-216ENST00000259951 TRAV8-6A0A0B4J262 113 aa11.55□□□□□ -0.56
HLA-F-216ENST00000259951 hDV102S1A0JD36 115 aa11.55□□□□□ -0.56
HLA-F-216ENST00000259951 RNASE13Q5GAN3 156 aaKnown RBP11.55□□□□□ -0.56
HLA-F-216ENST00000259951 IGLV4-69A0A075B6H9 119 aa11.54□□□□□ -0.56
HLA-F-216ENST00000259951 IGLC3P0DOY3 106 aa11.54□□□□□ -0.56
HLA-F-216ENST00000259951 MAJINQ3KP22 176 aa11.54□□□□□ -0.56
HLA-F-216ENST00000259951 NFE4Q86UQ8 179 aa11.54□□□□□ -0.56
HLA-F-216ENST00000259951 SEC11AP67812 179 aa11.53□□□□□ -0.56
HLA-F-216ENST00000259951 RBX1P62877 108 aa11.53□□□□□ -0.56
HLA-F-216ENST00000259951 CHAC1Q9BUX1 264 aa11.53□□□□□ -0.56
HLA-F-216ENST00000259951 C11orf86A6NJI1 115 aa11.52□□□□□ -0.57
HLA-F-216ENST00000259951 UBE2D1P51668 147 aa11.52□□□□□ -0.57
HLA-F-216ENST00000259951 STPG4Q8N801 248 aa11.52□□□□□ -0.57
HLA-F-216ENST00000259951 IGLV4-60A0A075B6I1 120 aa11.51□□□□□ -0.57
HLA-F-216ENST00000259951 A0A0J9YXV3 536 aa11.51□□□□□ -0.57
HLA-F-216ENST00000259951 TINCRA0A1B0GVN0 87 aa11.51□□□□□ -0.57
HLA-F-216ENST00000259951 MPV17L2Q567V2 206 aa11.51□□□□□ -0.57
HLA-F-216ENST00000259951 STAB2Q8WWQ8 2551 aa11.5□□□□□ -0.57
HLA-F-216ENST00000259951 IGLL5B9A064 214 aa11.5□□□□□ -0.57
HLA-F-216ENST00000259951 HERVK_113P61574 105 aa11.5□□□□□ -0.57
HLA-F-216ENST00000259951 CTAG1AP78358 180 aa11.5□□□□□ -0.57
HLA-F-216ENST00000259951 GEMIN7Q9H840 131 aaKnown RBP11.5□□□□□ -0.57
HLA-F-216ENST00000259951 ESRGQ1W209 222 aa11.49□□□□□ -0.57
HLA-F-216ENST00000259951 TMEM170BQ5T4T1 132 aa11.49□□□□□ -0.57
HLA-F-216ENST00000259951 FAM19A3Q7Z5A8 133 aa11.49□□□□□ -0.57
HLA-F-216ENST00000259951 HUWE1Q7Z6Z7 4374 aaKnown RBP11.49□□□□□ -0.57
HLA-F-216ENST00000259951 ANKRD39Q53RE8 183 aa11.49□□□□□ -0.57
HLA-F-216ENST00000259951 COL7A1Q02388 2944 aa11.48□□□□□ -0.57
HLA-F-216ENST00000259951 TRAV13-1A0A0B4J241 112 aa11.48□□□□□ -0.57
HLA-F-216ENST00000259951 HERVK_113P63121 156 aa11.48□□□□□ -0.57
HLA-F-216ENST00000259951 CCL25O15444 150 aa11.47□□□□□ -0.57
HLA-F-216ENST00000259951 UQCR10Q9UDW1 63 aa11.47□□□□□ -0.57
HLA-F-216ENST00000259951 ANGP03950 147 aaKnown RBP11.46□□□□□ -0.57
HLA-F-216ENST00000259951 ZNF22P17026 224 aaPredicted RBP11.46□□□□□ -0.57
HLA-F-216ENST00000259951 CCL18P55774 89 aa11.46□□□□□ -0.57
HLA-F-216ENST00000259951 C14orf144Q96I85 54 aa11.46□□□□□ -0.57
HLA-F-216ENST00000259951 NUPR2A6NF83 97 aa11.46□□□□□ -0.58
HLA-F-216ENST00000259951 H3BRM9 83 aa11.46□□□□□ -0.58
HLA-F-216ENST00000259951 LINC00242Q5T6M2 205 aa11.46□□□□□ -0.58
HLA-F-216ENST00000259951 MIEN1Q9BRT3 115 aa11.46□□□□□ -0.58
HLA-F-216ENST00000259951 IGLV5-45A0A087WSX0 123 aa11.45□□□□□ -0.58
HLA-F-216ENST00000259951 E9PLD3 99 aa11.45□□□□□ -0.58
HLA-F-216ENST00000259951 COX8AP10176 69 aa11.45□□□□□ -0.58
HLA-F-216ENST00000259951 NMUP48645 174 aa11.45□□□□□ -0.58
HLA-F-216ENST00000259951 SS18Q15532 418 aa11.45□□□□□ -0.58
HLA-F-216ENST00000259951 LINC00469Q8N7U9 141 aa11.45□□□□□ -0.58
HLA-F-216ENST00000259951 KLK5Q9Y337 293 aaPredicted RBP11.45□□□□□ -0.58
HLA-F-216ENST00000259951 IGKV3OR2-268A0A0C4DH90 116 aa11.44□□□□□ -0.58
HLA-F-216ENST00000259951 LBHQ53QV2 105 aaPredicted RBP11.44□□□□□ -0.58
HLA-F-216ENST00000259951 SLC25A34Q6PIV7 304 aa11.44□□□□□ -0.58
HLA-F-216ENST00000259951 DNAH9Q9NYC9 4486 aa11.43□□□□□ -0.58
HLA-F-216ENST00000259951 LINC00959A0A1B0GUT2 108 aa11.43□□□□□ -0.58
HLA-F-216ENST00000259951 TMEM223A0PJW6 202 aa11.43□□□□□ -0.58
HLA-F-216ENST00000259951 TCTAP57738 103 aa11.43□□□□□ -0.58
HLA-F-216ENST00000259951 WFDC10BQ8IUB3 73 aa11.43□□□□□ -0.58
HLA-F-216ENST00000259951 LINC00269Q8N2A0 174 aa11.43□□□□□ -0.58
HLA-F-216ENST00000259951 MRPS16Q9Y3D3 137 aaKnown RBP11.43□□□□□ -0.58
HLA-F-216ENST00000259951 REG3AQ06141 175 aa11.42□□□□□ -0.58
HLA-F-216ENST00000259951 IGKV2D-26A0A0A0MRZ7 120 aa11.41□□□□□ -0.58
HLA-F-216ENST00000259951 DLEU1O43261 78 aa11.41□□□□□ -0.58
HLA-F-216ENST00000259951 IGHV3-30P01768 117 aa11.41□□□□□ -0.58
HLA-F-216ENST00000259951 IGHV3-33P01772 117 aa11.41□□□□□ -0.58
HLA-F-216ENST00000259951 IGHV3-30-3P0DP02 117 aa11.41□□□□□ -0.58
HLA-F-216ENST00000259951 IGHV3-30-5P0DP03 117 aa11.41□□□□□ -0.58
HLA-F-216ENST00000259951 COX6A2Q02221 97 aa11.41□□□□□ -0.58
HLA-F-216ENST00000259951 LINC01556Q5JQF7 62 aa11.41□□□□□ -0.58
HLA-F-216ENST00000259951 CDKN2A-AS1Q9UH64 79 aa11.41□□□□□ -0.58
HLA-F-216ENST00000259951 LEPROTO15243 131 aa11.4□□□□□ -0.58
HLA-F-216ENST00000259951 BOD1L2Q8IYS8 172 aa11.4□□□□□ -0.58
HLA-F-216ENST00000259951 Q8N3U1 123 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms