RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 LOC100131303A0A0U1RQF7 123 aa19.52■□□□□ 0.72
CCM2-201ENST00000258781 MYMXA0A1B0GTQ4 84 aa19.52■□□□□ 0.71
CCM2-201ENST00000258781 LINC00694P0DN24 101 aa19.52■□□□□ 0.71
CCM2-201ENST00000258781 MIFP14174 115 aa19.52■□□□□ 0.71
CCM2-201ENST00000258781 FAM222AQ5U5X8 452 aa19.52■□□□□ 0.71
CCM2-201ENST00000258781 SBSPONQ8IVN8 264 aa19.52■□□□□ 0.71
CCM2-201ENST00000258781 A0A0J9YXV3 536 aa19.51■□□□□ 0.71
CCM2-201ENST00000258781 SMAGPQ0VAQ4 97 aa19.51■□□□□ 0.71
CCM2-201ENST00000258781 Q6ZUT4 128 aa19.51■□□□□ 0.71
CCM2-201ENST00000258781 RNF183Q96D59 192 aa19.51■□□□□ 0.71
CCM2-201ENST00000258781 IGHV4-28A0A0C4DH34 117 aa19.5■□□□□ 0.71
CCM2-201ENST00000258781 SEC11AP67812 179 aa19.5■□□□□ 0.71
CCM2-201ENST00000258781 ZNF22P17026 224 aaPredicted RBP19.5■□□□□ 0.71
CCM2-201ENST00000258781 CSDC2Q9Y534 153 aaKnown RBP19.5■□□□□ 0.71
CCM2-201ENST00000258781 PRB2P02812 416 aaPredicted RBP19.49■□□□□ 0.71
CCM2-201ENST00000258781 DGAT2L7PQ6IED9 249 aa19.48■□□□□ 0.71
CCM2-201ENST00000258781 Q8NAQ8 132 aa19.48■□□□□ 0.71
CCM2-201ENST00000258781 TMEM223A0PJW6 202 aa19.48■□□□□ 0.71
CCM2-201ENST00000258781 ORAOV1Q8WV07 137 aa19.48■□□□□ 0.71
CCM2-201ENST00000258781 RNASE13Q5GAN3 156 aaKnown RBP19.47■□□□□ 0.71
CCM2-201ENST00000258781 TMEM243Q9BU79 118 aa19.47■□□□□ 0.71
CCM2-201ENST00000258781 A8MZ25 164 aa19.46■□□□□ 0.71
CCM2-201ENST00000258781 TINCRA0A1B0GVN0 87 aa19.45■□□□□ 0.7
CCM2-201ENST00000258781 ZNF25P17030 456 aaPredicted RBP19.45■□□□□ 0.7
CCM2-201ENST00000258781 H7C423 109 aa19.45■□□□□ 0.7
CCM2-201ENST00000258781 ZNF815PA8K554 130 aa19.44■□□□□ 0.7
CCM2-201ENST00000258781 KPRPQ5T749 579 aaPredicted RBP19.44■□□□□ 0.7
CCM2-201ENST00000258781 PRO0255Q9UI72 69 aa19.44■□□□□ 0.7
CCM2-201ENST00000258781 TAL2Q16559 108 aa19.43■□□□□ 0.7
CCM2-201ENST00000258781 LEPROTO15243 131 aa19.42■□□□□ 0.7
CCM2-201ENST00000258781 UBE2D1P51668 147 aa19.42■□□□□ 0.7
CCM2-201ENST00000258781 KRTAP21-3Q3LHN1 58 aa19.42■□□□□ 0.7
CCM2-201ENST00000258781 UBE2L6O14933 153 aa19.41■□□□□ 0.7
CCM2-201ENST00000258781 DEFB4AO15263 64 aa19.41■□□□□ 0.7
CCM2-201ENST00000258781 A6NDN8 102 aa19.41■□□□□ 0.7
CCM2-201ENST00000258781 J3QQQ9 107 aa19.4■□□□□ 0.7
CCM2-201ENST00000258781 TSPEAR-AS2P59090 65 aa19.4■□□□□ 0.7
CCM2-201ENST00000258781 DAD1P61803 113 aa19.4■□□□□ 0.7
CCM2-201ENST00000258781 COX11Q9Y6N1 276 aa19.4■□□□□ 0.7
CCM2-201ENST00000258781 TRBV6-8A0A0A6YYG3 113 aa19.39■□□□□ 0.7
CCM2-201ENST00000258781 GYPEP15421 78 aa19.39■□□□□ 0.7
CCM2-201ENST00000258781 OR5A1Q8NGJ0 315 aa19.39■□□□□ 0.7
CCM2-201ENST00000258781 TAX1BP3O14907 124 aa19.39■□□□□ 0.69
CCM2-201ENST00000258781 AMMECR1LQ6DCA0 310 aa19.39■□□□□ 0.69
CCM2-201ENST00000258781 PLEKHB2Q96CS7 222 aa19.39■□□□□ 0.69
CCM2-201ENST00000258781 LGALS3P17931 250 aaKnown RBP19.38■□□□□ 0.69
CCM2-201ENST00000258781 TIRAPP58753 221 aa19.38■□□□□ 0.69
CCM2-201ENST00000258781 K7EIL1 84 aa19.37■□□□□ 0.69
CCM2-201ENST00000258781 SPART-AS1P0CW21 52 aa19.37■□□□□ 0.69
CCM2-201ENST00000258781 FAM19A3Q7Z5A8 133 aa19.37■□□□□ 0.69
CCM2-201ENST00000258781 TMEM101Q96IK0 257 aa19.37■□□□□ 0.69
CCM2-201ENST00000258781 TM2D2Q9BX73 214 aa19.37■□□□□ 0.69
CCM2-201ENST00000258781 CDC42SE2Q9NRR3 84 aa19.37■□□□□ 0.69
CCM2-201ENST00000258781 GCSHP23434 173 aa19.37■□□□□ 0.69
CCM2-201ENST00000258781 CEND1Q8N111 149 aa19.37■□□□□ 0.69
CCM2-201ENST00000258781 ATP6V0E2Q8NHE4 81 aa19.36■□□□□ 0.69
CCM2-201ENST00000258781 GEMIN7Q9H840 131 aaKnown RBP19.36■□□□□ 0.69
CCM2-201ENST00000258781 CELA1Q9UNI1 258 aa19.36■□□□□ 0.69
CCM2-201ENST00000258781 SCGB1D4Q6XE38 83 aa19.35■□□□□ 0.69
CCM2-201ENST00000258781 IGLV5-45A0A087WSX0 123 aa19.35■□□□□ 0.69
CCM2-201ENST00000258781 PAX4O43316 350 aa19.35■□□□□ 0.69
CCM2-201ENST00000258781 ATP5G1P05496 136 aa19.34■□□□□ 0.69
CCM2-201ENST00000258781 HIST1H4GQ99525 98 aa19.34■□□□□ 0.69
CCM2-201ENST00000258781 LINC00469Q8N7U9 141 aa19.33■□□□□ 0.69
CCM2-201ENST00000258781 TEX48A0A1B0GUV7 120 aa19.33■□□□□ 0.68
CCM2-201ENST00000258781 FXYD2P54710 66 aa19.33■□□□□ 0.68
CCM2-201ENST00000258781 Q6ZVH6 145 aa19.33■□□□□ 0.68
CCM2-201ENST00000258781 TENM3Q9P273 2699 aa19.32■□□□□ 0.68
CCM2-201ENST00000258781 HERVK_113P63121 156 aa19.32■□□□□ 0.68
CCM2-201ENST00000258781 RETNQ9HD89 108 aa19.32■□□□□ 0.68
CCM2-201ENST00000258781 IGHV1-58A0A0C4DH39 117 aa19.31■□□□□ 0.68
CCM2-201ENST00000258781 H3BRM9 83 aa19.31■□□□□ 0.68
CCM2-201ENST00000258781 IGHV3-30-3P0DP02 117 aa19.31■□□□□ 0.68
CCM2-201ENST00000258781 IGHV3-64A0A075B6Q5 118 aa19.3■□□□□ 0.68
CCM2-201ENST00000258781 A0A0J9YY99 117 aa19.3■□□□□ 0.68
CCM2-201ENST00000258781 GAGE6Q13070 117 aa19.3■□□□□ 0.68
CCM2-201ENST00000258781 LINC00242Q5T6M2 205 aa19.3■□□□□ 0.68
CCM2-201ENST00000258781 CHCHD5Q9BSY4 110 aa19.3■□□□□ 0.68
CCM2-201ENST00000258781 VSIG2Q96IQ7 327 aa19.29■□□□□ 0.68
CCM2-201ENST00000258781 PTTG1IPP53801 180 aa19.28■□□□□ 0.68
CCM2-201ENST00000258781 CDKN2A-AS1Q9UH64 79 aa19.28■□□□□ 0.68
CCM2-201ENST00000258781 SPANXB1Q9NS25 103 aaPredicted RBP19.26■□□□□ 0.67
CCM2-201ENST00000258781 TRAV8-3A0A0A6YYJ7 113 aa19.26■□□□□ 0.67
CCM2-201ENST00000258781 K7EP13 123 aa19.26■□□□□ 0.67
CCM2-201ENST00000258781 TRAV13-1A0A0B4J241 112 aa19.25■□□□□ 0.67
CCM2-201ENST00000258781 SPINK8P0C7L1 97 aa19.25■□□□□ 0.67
CCM2-201ENST00000258781 COX6A2Q02221 97 aa19.25■□□□□ 0.67
CCM2-201ENST00000258781 HUWE1Q7Z6Z7 4374 aaKnown RBP19.25■□□□□ 0.67
CCM2-201ENST00000258781 SMIM13P0DJ93 91 aa19.24■□□□□ 0.67
CCM2-201ENST00000258781 DEFB121Q5J5C9 76 aa19.24■□□□□ 0.67
CCM2-201ENST00000258781 TRAV26-1A0A087WT03 109 aa19.24■□□□□ 0.67
CCM2-201ENST00000258781 F5H768 121 aa19.23■□□□□ 0.67
CCM2-201ENST00000258781 SRSF9Q13242 221 aaKnown RBP eCLIP19.22■□□□□ 0.67
CCM2-201ENST00000258781 IGLV4-60A0A075B6I1 120 aa19.21■□□□□ 0.67
CCM2-201ENST00000258781 C9orf118A6NHY6 69 aa19.21■□□□□ 0.67
CCM2-201ENST00000258781 NHP2Q9NX24 153 aaKnown RBP19.21■□□□□ 0.67
CCM2-201ENST00000258781 MRAPQ8TCY5 172 aa19.2■□□□□ 0.66
CCM2-201ENST00000258781 C11orf68Q9H3H3 251 aaKnown RBP19.2■□□□□ 0.66
CCM2-201ENST00000258781 IGLV5-39A0A0G2JS06 123 aa19.19■□□□□ 0.66
CCM2-201ENST00000258781 C10orf126Q8N4M7 172 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms