RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 Q9H8V8 135 aa13.42□□□□□ -0.26
LRP3-201ENST00000253193 NOP10Q9NPE3 64 aaKnown RBP13.42□□□□□ -0.26
LRP3-201ENST00000253193 RPL13AP40429 203 aaKnown RBP13.42□□□□□ -0.26
LRP3-201ENST00000253193 YAE1D1Q9NRH1 226 aa13.42□□□□□ -0.26
LRP3-201ENST00000253193 PRIMA1Q86XR5 153 aa13.41□□□□□ -0.26
LRP3-201ENST00000253193 C4orf3Q8WVX3 66 aa13.41□□□□□ -0.26
LRP3-201ENST00000253193 PYGO1Q9Y3Y4 419 aa13.41□□□□□ -0.26
LRP3-201ENST00000253193 MXRA5Q9NR99 2828 aa13.41□□□□□ -0.26
LRP3-201ENST00000253193 LINC01620Q4KN68 170 aa13.41□□□□□ -0.26
LRP3-201ENST00000253193 ADAMTSL4-AS1Q5T5F5 129 aa13.41□□□□□ -0.26
LRP3-201ENST00000253193 VSIG2Q96IQ7 327 aa13.41□□□□□ -0.26
LRP3-201ENST00000253193 UBE2D4Q9Y2X8 147 aa13.41□□□□□ -0.26
LRP3-201ENST00000253193 CLEC2BQ92478 149 aa13.41□□□□□ -0.26
LRP3-201ENST00000253193 TMEM262E9PQX1 116 aa13.4□□□□□ -0.26
LRP3-201ENST00000253193 GAGE7O76087 117 aa13.4□□□□□ -0.26
LRP3-201ENST00000253193 GAGE12FP0CL80 117 aa13.4□□□□□ -0.26
LRP3-201ENST00000253193 GAGE12GP0CL81 117 aa13.4□□□□□ -0.26
LRP3-201ENST00000253193 GAGE12IP0CL82 117 aa13.4□□□□□ -0.26
LRP3-201ENST00000253193 MRPS36P82909 103 aaKnown RBP13.4□□□□□ -0.26
LRP3-201ENST00000253193 A0A0B4J2C4 111 aa13.4□□□□□ -0.26
LRP3-201ENST00000253193 SNCGO76070 127 aa13.4□□□□□ -0.26
LRP3-201ENST00000253193 TRIAP1O43715 76 aa13.4□□□□□ -0.26
LRP3-201ENST00000253193 CCL24O00175 119 aa13.39□□□□□ -0.27
LRP3-201ENST00000253193 NDUFA7O95182 113 aa13.39□□□□□ -0.27
LRP3-201ENST00000253193 Q6ZTI0 123 aa13.39□□□□□ -0.27
LRP3-201ENST00000253193 CHCHD7Q9BUK0 85 aa13.39□□□□□ -0.27
LRP3-201ENST00000253193 TINCRA0A1B0GVN0 87 aa13.39□□□□□ -0.27
LRP3-201ENST00000253193 ICOSQ9Y6W8 199 aa13.39□□□□□ -0.27
LRP3-201ENST00000253193 TMEM101Q96IK0 257 aa13.38□□□□□ -0.27
LRP3-201ENST00000253193 TEX29Q8N6K0 151 aa13.38□□□□□ -0.27
LRP3-201ENST00000253193 TRGV4A0A0C4DH28 118 aa13.37□□□□□ -0.27
LRP3-201ENST00000253193 TRAV8-4A0A0B4J246 113 aa13.37□□□□□ -0.27
LRP3-201ENST00000253193 FLNAP21333 2647 aaKnown RBP13.37□□□□□ -0.27
LRP3-201ENST00000253193 TEX49A0A1B0GTD5 131 aa13.37□□□□□ -0.27
LRP3-201ENST00000253193 FBN2P35556 2912 aa13.36□□□□□ -0.27
LRP3-201ENST00000253193 MIAQ16674 131 aa13.36□□□□□ -0.27
LRP3-201ENST00000253193 DNAJC30Q96LL9 226 aa13.36□□□□□ -0.27
LRP3-201ENST00000253193 CRLF1O75462 422 aa13.35□□□□□ -0.27
LRP3-201ENST00000253193 NF1P21359 2839 aa13.35□□□□□ -0.27
LRP3-201ENST00000253193 ODF3L2Q3SX64 289 aa13.35□□□□□ -0.27
LRP3-201ENST00000253193 HERVK_113P63121 156 aa13.34□□□□□ -0.27
LRP3-201ENST00000253193 HIST2H2BCQ6DN03 193 aa13.34□□□□□ -0.27
LRP3-201ENST00000253193 ZFAND6Q6FIF0 208 aa13.34□□□□□ -0.27
LRP3-201ENST00000253193 UBE2WQ96B02 151 aa13.34□□□□□ -0.27
LRP3-201ENST00000253193 ANAPC13Q9BS18 74 aa13.34□□□□□ -0.27
LRP3-201ENST00000253193 WFDC11Q8NEX6 87 aa13.34□□□□□ -0.27
LRP3-201ENST00000253193 BBC3Q96PG8 261 aaPredicted RBP13.34□□□□□ -0.27
LRP3-201ENST00000253193 CITED2Q99967 270 aaPredicted RBP13.34□□□□□ -0.27
LRP3-201ENST00000253193 SBSPONQ8IVN8 264 aa13.34□□□□□ -0.27
LRP3-201ENST00000253193 CHCHD5Q9BSY4 110 aa13.34□□□□□ -0.27
LRP3-201ENST00000253193 WFDC10AQ9H1F0 79 aa13.34□□□□□ -0.27
LRP3-201ENST00000253193 USP24Q9UPU5 2620 aa13.33□□□□□ -0.27
LRP3-201ENST00000253193 RNF152Q8N8N0 203 aa13.33□□□□□ -0.28
LRP3-201ENST00000253193 COX6A2Q02221 97 aa13.33□□□□□ -0.28
LRP3-201ENST00000253193 GAGE2BQ13066 116 aa13.33□□□□□ -0.28
LRP3-201ENST00000253193 GAGE2EQ4V326 116 aa13.33□□□□□ -0.28
LRP3-201ENST00000253193 GAGE2DQ9UEU5 116 aa13.33□□□□□ -0.28
LRP3-201ENST00000253193 SS18L2Q9UHA2 77 aa13.33□□□□□ -0.28
LRP3-201ENST00000253193 LINC00694P0DN24 101 aa13.32□□□□□ -0.28
LRP3-201ENST00000253193 GAGE6Q13070 117 aa13.32□□□□□ -0.28
LRP3-201ENST00000253193 TTC32Q5I0X7 151 aa13.32□□□□□ -0.28
LRP3-201ENST00000253193 DNAJC9-AS1A6NH13 148 aa13.32□□□□□ -0.28
LRP3-201ENST00000253193 K7EQD1 137 aa13.32□□□□□ -0.28
LRP3-201ENST00000253193 A0A096LNT2 108 aa13.32□□□□□ -0.28
LRP3-201ENST00000253193 TRAV4A0A0B4J268 109 aa13.32□□□□□ -0.28
LRP3-201ENST00000253193 DEFB130BP0DP73 79 aa13.32□□□□□ -0.28
LRP3-201ENST00000253193 DEFB130AP0DP74 79 aa13.32□□□□□ -0.28
LRP3-201ENST00000253193 RS1O15537 224 aa13.31□□□□□ -0.28
LRP3-201ENST00000253193 C11orf72Q8NBR9 251 aa13.31□□□□□ -0.28
LRP3-201ENST00000253193 C11orf68Q9H3H3 251 aaKnown RBP13.31□□□□□ -0.28
LRP3-201ENST00000253193 TRBV10-2A0A0K0K1G8 114 aa13.3□□□□□ -0.28
LRP3-201ENST00000253193 TMEM243Q9BU79 118 aa13.3□□□□□ -0.28
LRP3-201ENST00000253193 C1orf158Q8N1D5 194 aa13.29□□□□□ -0.28
LRP3-201ENST00000253193 TRBV30A0A0K0K1B3 111 aa13.29□□□□□ -0.28
LRP3-201ENST00000253193 ITPR3Q14573 2671 aa13.28□□□□□ -0.28
LRP3-201ENST00000253193 LINC00158P58513 81 aa13.28□□□□□ -0.28
LRP3-201ENST00000253193 B5MCH6 92 aa13.28□□□□□ -0.28
LRP3-201ENST00000253193 LINC00242Q5T6M2 205 aa13.27□□□□□ -0.29
LRP3-201ENST00000253193 COPS9Q8WXC6 57 aa13.27□□□□□ -0.29
LRP3-201ENST00000253193 LOC100131303A0A0U1RQF7 123 aa13.27□□□□□ -0.29
LRP3-201ENST00000253193 IFITM1P13164 125 aa13.27□□□□□ -0.29
LRP3-201ENST00000253193 ZNF843Q8N446 348 aa13.27□□□□□ -0.29
LRP3-201ENST00000253193 SPANXDQ9BXN6 97 aa13.26□□□□□ -0.29
LRP3-201ENST00000253193 SPANXCQ9NY87 97 aa13.26□□□□□ -0.29
LRP3-201ENST00000253193 DAZ2Q13117 558 aaKnown RBP13.26□□□□□ -0.29
LRP3-201ENST00000253193 DAZ4Q86SG3 579 aaKnown RBP13.26□□□□□ -0.29
LRP3-201ENST00000253193 OR13C6PQ8NH95 151 aa13.26□□□□□ -0.29
LRP3-201ENST00000253193 FAM104AQ969W3 186 aa13.26□□□□□ -0.29
LRP3-201ENST00000253193 DAZ3Q9NR90 486 aaKnown RBP13.26□□□□□ -0.29
LRP3-201ENST00000253193 NHLRC4P0CG21 123 aaPredicted RBP13.25□□□□□ -0.29
LRP3-201ENST00000253193 PLA2G2AP14555 144 aa13.25□□□□□ -0.29
LRP3-201ENST00000253193 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.25□□□□□ -0.29
LRP3-201ENST00000253193 C15orf53Q8NAA6 179 aa13.25□□□□□ -0.29
LRP3-201ENST00000253193 LINC00308Q8TCZ7 52 aa13.25□□□□□ -0.29
LRP3-201ENST00000253193 PFN2P35080 140 aa13.25□□□□□ -0.29
LRP3-201ENST00000253193 LITAFQ99732 161 aa13.25□□□□□ -0.29
LRP3-201ENST00000253193 TIRAPP58753 221 aa13.24□□□□□ -0.29
LRP3-201ENST00000253193 NDUFA1O15239 70 aa13.24□□□□□ -0.29
LRP3-201ENST00000253193 FSHBP01225 129 aa13.24□□□□□ -0.29
LRP3-201ENST00000253193 BEAN1Q3B7T3 259 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms