RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 SMIM2Q9BVW6 85 aa16.38■□□□□ 0.21
LSM7-201ENST00000252622 IGKV3OR2-268A0A0C4DH90 116 aa16.37■□□□□ 0.21
LSM7-201ENST00000252622 PRSS1P07477 247 aa16.36■□□□□ 0.21
LSM7-201ENST00000252622 SMAGPQ0VAQ4 97 aa16.36■□□□□ 0.21
LSM7-201ENST00000252622 TMEM136Q6ZRR5 245 aa16.36■□□□□ 0.21
LSM7-201ENST00000252622 CLRN3Q8NCR9 226 aa16.35■□□□□ 0.21
LSM7-201ENST00000252622 CDC42SE2Q9NRR3 84 aa16.35■□□□□ 0.21
LSM7-201ENST00000252622 Q6ZSA8 131 aa16.34■□□□□ 0.21
LSM7-201ENST00000252622 CHCHD10Q8WYQ3 142 aaPredicted RBP16.34■□□□□ 0.21
LSM7-201ENST00000252622 PRELID3AQ96N28 172 aa16.34■□□□□ 0.21
LSM7-201ENST00000252622 CSDC2Q9Y534 153 aaKnown RBP16.34■□□□□ 0.21
LSM7-201ENST00000252622 GAGE12HA6NDE8 117 aa16.33■□□□□ 0.2
LSM7-201ENST00000252622 C10orf91Q5T1B1 145 aa16.33■□□□□ 0.2
LSM7-201ENST00000252622 TMEM18Q96B42 140 aa16.33■□□□□ 0.2
LSM7-201ENST00000252622 KRTAP4-5Q9BYR2 181 aa16.33■□□□□ 0.2
LSM7-201ENST00000252622 FAM30AQ9NZY2 134 aa16.33■□□□□ 0.2
LSM7-201ENST00000252622 LAMTOR2Q9Y2Q5 125 aa16.33■□□□□ 0.2
LSM7-201ENST00000252622 UBE2D4Q9Y2X8 147 aa16.33■□□□□ 0.2
LSM7-201ENST00000252622 TRAV9-1A0A075B6T8 112 aa16.32■□□□□ 0.2
LSM7-201ENST00000252622 LINC01620Q4KN68 170 aa16.32■□□□□ 0.2
LSM7-201ENST00000252622 DGAT2L7PQ6IED9 249 aa16.32■□□□□ 0.2
LSM7-201ENST00000252622 ZNF664Q8N3J9 261 aa16.32■□□□□ 0.2
LSM7-201ENST00000252622 TIMM21Q9BVV7 248 aa16.31■□□□□ 0.2
LSM7-201ENST00000252622 CARHSP1Q9Y2V2 147 aaKnown RBP16.31■□□□□ 0.2
LSM7-201ENST00000252622 FAT1Q14517 4588 aa16.31■□□□□ 0.2
LSM7-201ENST00000252622 LINC00959A0A1B0GUT2 108 aa16.3■□□□□ 0.2
LSM7-201ENST00000252622 PRSS47A8MTI9 375 aa16.28■□□□□ 0.2
LSM7-201ENST00000252622 hDV102S1A0JD36 115 aa16.27■□□□□ 0.2
LSM7-201ENST00000252622 CNBPP62633 177 aaKnown RBP16.27■□□□□ 0.2
LSM7-201ENST00000252622 HAMPP81172 84 aa16.27■□□□□ 0.2
LSM7-201ENST00000252622 FOXI1Q12951 378 aa16.27■□□□□ 0.2
LSM7-201ENST00000252622 CFAP161Q6P656 301 aa16.27■□□□□ 0.2
LSM7-201ENST00000252622 S100PP25815 95 aa16.26■□□□□ 0.19
LSM7-201ENST00000252622 SS18Q15532 418 aa16.26■□□□□ 0.19
LSM7-201ENST00000252622 C15orf56Q8N910 161 aa16.26■□□□□ 0.19
LSM7-201ENST00000252622 MAP1LC3AQ9H492 121 aa16.26■□□□□ 0.19
LSM7-201ENST00000252622 CCL25O15444 150 aa16.25■□□□□ 0.19
LSM7-201ENST00000252622 XCL1P47992 114 aa16.25■□□□□ 0.19
LSM7-201ENST00000252622 RHEBQ15382 184 aa16.25■□□□□ 0.19
LSM7-201ENST00000252622 C9orf163Q8N9P6 203 aa16.25■□□□□ 0.19
LSM7-201ENST00000252622 RAB5AP20339 215 aa16.24■□□□□ 0.19
LSM7-201ENST00000252622 RPL39P62891 51 aaKnown RBP16.24■□□□□ 0.19
LSM7-201ENST00000252622 SPANXA1Q9NS26 97 aa16.24■□□□□ 0.19
LSM7-201ENST00000252622 AP5S1Q9NUS5 200 aa16.24■□□□□ 0.19
LSM7-201ENST00000252622 EPM2AB3EWF7 344 aa16.23■□□□□ 0.19
LSM7-201ENST00000252622 Q6ZUT4 128 aa16.23■□□□□ 0.19
LSM7-201ENST00000252622 CD164L2Q6UWJ8 174 aa16.22■□□□□ 0.19
LSM7-201ENST00000252622 C1orf196B1AJZ1 125 aa16.21■□□□□ 0.19
LSM7-201ENST00000252622 Q8N8P6 123 aa16.21■□□□□ 0.19
LSM7-201ENST00000252622 GVQW2A0A096LPI5 108 aaPredicted RBP16.2■□□□□ 0.18
LSM7-201ENST00000252622 LOC389332A0A1B0GUA5 103 aa16.2■□□□□ 0.18
LSM7-201ENST00000252622 SMR3BP02814 79 aaPredicted RBP16.2■□□□□ 0.18
LSM7-201ENST00000252622 RNASE13Q5GAN3 156 aaKnown RBP16.2■□□□□ 0.18
LSM7-201ENST00000252622 RPS10P5Q9NQ39 176 aa16.2■□□□□ 0.18
LSM7-201ENST00000252622 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.19■□□□□ 0.18
LSM7-201ENST00000252622 SLPIP03973 132 aa16.19■□□□□ 0.18
LSM7-201ENST00000252622 MRPS36P82909 103 aaKnown RBP16.19■□□□□ 0.18
LSM7-201ENST00000252622 Q5VSD8 79 aa16.19■□□□□ 0.18
LSM7-201ENST00000252622 CHAC1Q9BUX1 264 aa16.19■□□□□ 0.18
LSM7-201ENST00000252622 VPS13BQ7Z7G8 4022 aa16.18■□□□□ 0.18
LSM7-201ENST00000252622 SCXQ7RTU7 201 aa16.18■□□□□ 0.18
LSM7-201ENST00000252622 FAM104AQ969W3 186 aa16.18■□□□□ 0.18
LSM7-201ENST00000252622 GNB1LQ9BYB4 327 aa16.18■□□□□ 0.18
LSM7-201ENST00000252622 K7EMI3 77 aa16.17■□□□□ 0.18
LSM7-201ENST00000252622 COX19Q49B96 90 aa16.17■□□□□ 0.18
LSM7-201ENST00000252622 HIGD2BQ4VC39 106 aa16.17■□□□□ 0.18
LSM7-201ENST00000252622 TRAV13-1A0A0B4J241 112 aa16.16■□□□□ 0.18
LSM7-201ENST00000252622 IGHV1-58A0A0C4DH39 117 aa16.16■□□□□ 0.18
LSM7-201ENST00000252622 NXT2Q9NPJ8 142 aaKnown RBP16.16■□□□□ 0.18
LSM7-201ENST00000252622 PYGO1Q9Y3Y4 419 aa16.16■□□□□ 0.18
LSM7-201ENST00000252622 IFI27P40305 119 aaPredicted RBP16.15■□□□□ 0.18
LSM7-201ENST00000252622 NDUFA5Q16718 116 aa16.15■□□□□ 0.18
LSM7-201ENST00000252622 SDIM1Q6ZPB5 146 aa16.15■□□□□ 0.18
LSM7-201ENST00000252622 FAM229AH3BQW9 127 aa16.14■□□□□ 0.17
LSM7-201ENST00000252622 APOC3P02656 99 aa16.14■□□□□ 0.17
LSM7-201ENST00000252622 KIAA1644Q3SXP7 199 aa16.14■□□□□ 0.17
LSM7-201ENST00000252622 ORMDL2Q53FV1 153 aa16.14■□□□□ 0.17
LSM7-201ENST00000252622 OPRPNQ99935 248 aaPredicted RBP16.14■□□□□ 0.17
LSM7-201ENST00000252622 IGHV3-64A0A075B6Q5 118 aa16.13■□□□□ 0.17
LSM7-201ENST00000252622 MT-ND6P03923 174 aa16.13■□□□□ 0.17
LSM7-201ENST00000252622 COX7A2LO14548 114 aa16.12■□□□□ 0.17
LSM7-201ENST00000252622 SVBPQ8N300 66 aa16.12■□□□□ 0.17
LSM7-201ENST00000252622 CIRBP-AS1Q8TBR5 109 aa16.12■□□□□ 0.17
LSM7-201ENST00000252622 CYSLTR1Q9Y271 337 aa16.12■□□□□ 0.17
LSM7-201ENST00000252622 SNAPINO95295 136 aa16.11■□□□□ 0.17
LSM7-201ENST00000252622 IFITM10A6NMD0 228 aa16.1■□□□□ 0.17
LSM7-201ENST00000252622 C2orf66Q6UXQ4 117 aa16.1■□□□□ 0.17
LSM7-201ENST00000252622 IGLV4-3A0A075B6K6 122 aa16.09■□□□□ 0.17
LSM7-201ENST00000252622 MALP21145 153 aa16.09■□□□□ 0.17
LSM7-201ENST00000252622 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.09■□□□□ 0.17
LSM7-201ENST00000252622 LINC00528Q8N1L1 170 aa16.08■□□□□ 0.16
LSM7-201ENST00000252622 ALKBH7Q9BT30 221 aaPredicted RBP16.08■□□□□ 0.16
LSM7-201ENST00000252622 CIRBPQ14011 172 aaKnown RBP16.07■□□□□ 0.16
LSM7-201ENST00000252622 TMEM141Q96I45 108 aa16.07■□□□□ 0.16
LSM7-201ENST00000252622 MRPL18Q9H0U6 180 aaKnown RBP16.07■□□□□ 0.16
LSM7-201ENST00000252622 ZNF561-AS1K7EIQ3 104 aa16.06■□□□□ 0.16
LSM7-201ENST00000252622 NPSP0C0P6 89 aa16.06■□□□□ 0.16
LSM7-201ENST00000252622 PANO1I0J062 215 aa16.05■□□□□ 0.16
LSM7-201ENST00000252622 G0S2P27469 103 aa16.05■□□□□ 0.16
LSM7-201ENST00000252622 C5orf38Q86SI9 138 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 205 ms