RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 ATOX1O00244 68 aa8.65□□□□□ -1.03
SOX9-201ENST00000245479 FBXL19-AS1Q494R0 122 aa8.65□□□□□ -1.03
SOX9-201ENST00000245479 LINC00643Q86TS7 51 aa8.65□□□□□ -1.03
SOX9-201ENST00000245479 USMG5Q96IX5 58 aa8.65□□□□□ -1.03
SOX9-201ENST00000245479 UQCRQO14949 82 aa8.64□□□□□ -1.03
SOX9-201ENST00000245479 HERVK_113P63121 156 aa8.64□□□□□ -1.03
SOX9-201ENST00000245479 NBEAL1Q6ZS30 2694 aa8.63□□□□□ -1.03
SOX9-201ENST00000245479 Q96MF0 132 aa8.63□□□□□ -1.03
SOX9-201ENST00000245479 FAM110AQ9BQ89 295 aa8.63□□□□□ -1.03
SOX9-201ENST00000245479 M0QXV9 152 aa8.63□□□□□ -1.03
SOX9-201ENST00000245479 ZNF22P17026 224 aaPredicted RBP8.63□□□□□ -1.03
SOX9-201ENST00000245479 C20orf203Q8NBC4 194 aa8.63□□□□□ -1.03
SOX9-201ENST00000245479 TRBV30A0A0K0K1B3 111 aa8.63□□□□□ -1.03
SOX9-201ENST00000245479 OVOL2Q9BRP0 275 aa8.63□□□□□ -1.03
SOX9-201ENST00000245479 PROK1P58294 105 aa8.62□□□□□ -1.03
SOX9-201ENST00000245479 ZNF415Q09FC8 603 aa8.62□□□□□ -1.03
SOX9-201ENST00000245479 S100A7L2Q5SY68 101 aa8.62□□□□□ -1.03
SOX9-201ENST00000245479 C10orf105Q8TEF2 133 aa8.62□□□□□ -1.03
SOX9-201ENST00000245479 IGLV2-18A0A075B6J9 118 aa8.62□□□□□ -1.03
SOX9-201ENST00000245479 RPL35AP18077 110 aaKnown RBP8.62□□□□□ -1.03
SOX9-201ENST00000245479 PFN2P35080 140 aa8.62□□□□□ -1.03
SOX9-201ENST00000245479 RPL36AP83881 106 aaKnown RBP8.62□□□□□ -1.03
SOX9-201ENST00000245479 NSUN5P1Q3KNT7 163 aa8.62□□□□□ -1.03
SOX9-201ENST00000245479 RPL36ALQ969Q0 106 aaKnown RBP8.62□□□□□ -1.03
SOX9-201ENST00000245479 Q6Q795 121 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 C3orf22Q8N5N4 141 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 TRGV2A0A075B6R0 118 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 IGHV4OR15-8A0A075B7B6 117 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 A0A087WW49 117 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 TMEM86BQ8N661 226 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 C5orf47Q569G3 176 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 Q8N6K4 173 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 ZNRF2Q8NHG8 242 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 TRGV1A0A0A0MS02 117 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 MED14OSP0DP75 135 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 MIAQ16674 131 aa8.61□□□□□ -1.03
SOX9-201ENST00000245479 NDUFA7O95182 113 aa8.6□□□□□ -1.03
SOX9-201ENST00000245479 LINC00694P0DN24 101 aa8.6□□□□□ -1.03
SOX9-201ENST00000245479 TMEM263Q8WUH6 116 aaKnown RBP8.6□□□□□ -1.03
SOX9-201ENST00000245479 hADV29S1A0JD25 119 aa8.6□□□□□ -1.03
SOX9-201ENST00000245479 TSPEAR-AS2P59090 65 aa8.6□□□□□ -1.03
SOX9-201ENST00000245479 Q9HAA7 133 aa8.6□□□□□ -1.03
SOX9-201ENST00000245479 DAZ2Q13117 558 aaKnown RBP8.6□□□□□ -1.03
SOX9-201ENST00000245479 DAZ4Q86SG3 579 aaKnown RBP8.6□□□□□ -1.03
SOX9-201ENST00000245479 ZFAND2AQ8N6M9 145 aa8.6□□□□□ -1.03
SOX9-201ENST00000245479 DAZ3Q9NR90 486 aaKnown RBP8.6□□□□□ -1.03
SOX9-201ENST00000245479 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
SOX9-201ENST00000245479 H7C423 109 aa8.59□□□□□ -1.03
SOX9-201ENST00000245479 TRAV13-2A0A0B4J235 113 aa8.59□□□□□ -1.03
SOX9-201ENST00000245479 DNAJC30Q96LL9 226 aa8.59□□□□□ -1.03
SOX9-201ENST00000245479 MGAM2Q2M2H8 2515 aa8.59□□□□□ -1.03
SOX9-201ENST00000245479 C1orf43Q9BWL3 253 aa8.59□□□□□ -1.04
SOX9-201ENST00000245479 LAMTOR3Q9UHA4 124 aa8.59□□□□□ -1.04
SOX9-201ENST00000245479 A8MZ25 164 aa8.58□□□□□ -1.04
SOX9-201ENST00000245479 C6orf226Q5I0X4 101 aa8.58□□□□□ -1.04
SOX9-201ENST00000245479 SDIM1Q6ZPB5 146 aa8.58□□□□□ -1.04
SOX9-201ENST00000245479 SETXQ7Z333 2677 aaKnown RBP8.57□□□□□ -1.04
SOX9-201ENST00000245479 IGHV4-4A0A075B6R2 117 aa8.57□□□□□ -1.04
SOX9-201ENST00000245479 ATP5G1P05496 136 aa8.57□□□□□ -1.04
SOX9-201ENST00000245479 UBL5Q9BZL1 73 aa8.57□□□□□ -1.04
SOX9-201ENST00000245479 IGLV4-3A0A075B6K6 122 aa8.57□□□□□ -1.04
SOX9-201ENST00000245479 RBMY1FQ15415 496 aaKnown RBP8.57□□□□□ -1.04
SOX9-201ENST00000245479 PPDPFQ9H3Y8 114 aa8.57□□□□□ -1.04
SOX9-201ENST00000245479 HAMPP81172 84 aa8.57□□□□□ -1.04
SOX9-201ENST00000245479 COX8CQ7Z4L0 72 aa8.57□□□□□ -1.04
SOX9-201ENST00000245479 A0A096LPF7 62 aa8.56□□□□□ -1.04
SOX9-201ENST00000245479 LINC01356Q8N9X3 169 aa8.56□□□□□ -1.04
SOX9-201ENST00000245479 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
SOX9-201ENST00000245479 IGIPA6NJ69 53 aa8.56□□□□□ -1.04
SOX9-201ENST00000245479 LST1O00453 97 aa8.56□□□□□ -1.04
SOX9-201ENST00000245479 COX7A2LO14548 114 aa8.56□□□□□ -1.04
SOX9-201ENST00000245479 RNASE3P12724 160 aaKnown RBP8.56□□□□□ -1.04
SOX9-201ENST00000245479 POLR2KP53803 58 aaKnown RBP8.56□□□□□ -1.04
SOX9-201ENST00000245479 Q6ZSV7 163 aa8.56□□□□□ -1.04
SOX9-201ENST00000245479 BBC3Q96PG8 261 aaPredicted RBP8.56□□□□□ -1.04
SOX9-201ENST00000245479 MAST4O15021 2626 aa8.55□□□□□ -1.04
SOX9-201ENST00000245479 FHL3Q13643 280 aa8.55□□□□□ -1.04
SOX9-201ENST00000245479 CITED2Q99967 270 aaPredicted RBP8.55□□□□□ -1.04
SOX9-201ENST00000245479 TRGV4A0A0C4DH28 118 aa8.55□□□□□ -1.04
SOX9-201ENST00000245479 NXPH4O95158 308 aa8.55□□□□□ -1.04
SOX9-201ENST00000245479 IGHG2P01859 326 aa8.55□□□□□ -1.04
SOX9-201ENST00000245479 EBI3Q14213 229 aa8.55□□□□□ -1.04
SOX9-201ENST00000245479 C14orf132Q9NPU4 83 aa8.55□□□□□ -1.04
SOX9-201ENST00000245479 ESM1Q9NQ30 184 aa8.55□□□□□ -1.04
SOX9-201ENST00000245479 F8P00451 2351 aa8.55□□□□□ -1.04
SOX9-201ENST00000245479 STHQ8IWL8 128 aa8.55□□□□□ -1.04
SOX9-201ENST00000245479 TRBV27A0A0K0K1C4 114 aa8.54□□□□□ -1.04
SOX9-201ENST00000245479 TMEM243Q9BU79 118 aa8.54□□□□□ -1.04
SOX9-201ENST00000245479 IMUPQ9GZP8 106 aa8.54□□□□□ -1.04
SOX9-201ENST00000245479 CDKN2A-AS1Q9UH64 79 aa8.54□□□□□ -1.04
SOX9-201ENST00000245479 KLK5Q9Y337 293 aaPredicted RBP8.54□□□□□ -1.04
SOX9-201ENST00000245479 NOTCH1P46531 2555 aa8.54□□□□□ -1.04
SOX9-201ENST00000245479 TMEM61Q8N0U2 210 aa8.54□□□□□ -1.04
SOX9-201ENST00000245479 VSIG2Q96IQ7 327 aa8.54□□□□□ -1.04
SOX9-201ENST00000245479 Q9UF83 564 aa8.54□□□□□ -1.04
SOX9-201ENST00000245479 VPREB3Q9UKI3 123 aa8.54□□□□□ -1.04
SOX9-201ENST00000245479 WFDC11Q8NEX6 87 aa8.54□□□□□ -1.04
SOX9-201ENST00000245479 SND1-IT1Q9HBX3 110 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms