RNA–Protein interactions for RNA: ENST00000243325.6

RAB9A-201, Transcript of RAB9A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB9A, Length 393 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB9A-201ENST00000243325 C7orf77A4D0Y5 90 aa10.65□□□□□ -0.7
RAB9A-201ENST00000243325 FCER1GP30273 86 aa10.65□□□□□ -0.7
RAB9A-201ENST00000243325 C15orf56Q8N910 161 aa10.65□□□□□ -0.7
RAB9A-201ENST00000243325 CKS2P33552 79 aa10.64□□□□□ -0.71
RAB9A-201ENST00000243325 RAB14P61106 215 aa10.64□□□□□ -0.71
RAB9A-201ENST00000243325 HIGD2BQ4VC39 106 aa10.64□□□□□ -0.71
RAB9A-201ENST00000243325 CDC42SE2Q9NRR3 84 aa10.64□□□□□ -0.71
RAB9A-201ENST00000243325 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.64□□□□□ -0.71
RAB9A-201ENST00000243325 LINC00959A0A1B0GUT2 108 aa10.63□□□□□ -0.71
RAB9A-201ENST00000243325 LINC00862A6NCI5 91 aa10.63□□□□□ -0.71
RAB9A-201ENST00000243325 PANO1I0J062 215 aa10.63□□□□□ -0.71
RAB9A-201ENST00000243325 PPP1R2P9O14990 202 aa10.63□□□□□ -0.71
RAB9A-201ENST00000243325 XCL1P47992 114 aa10.63□□□□□ -0.71
RAB9A-201ENST00000243325 FOXI1Q12951 378 aa10.63□□□□□ -0.71
RAB9A-201ENST00000243325 MRPL52Q86TS9 123 aaKnown RBP10.63□□□□□ -0.71
RAB9A-201ENST00000243325 KIR2DL4Q99706 377 aa10.63□□□□□ -0.71
RAB9A-201ENST00000243325 IGHV3-64A0A075B6Q5 118 aa10.62□□□□□ -0.71
RAB9A-201ENST00000243325 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.62□□□□□ -0.71
RAB9A-201ENST00000243325 CCL25O15444 150 aa10.62□□□□□ -0.71
RAB9A-201ENST00000243325 S100A8P05109 93 aa10.62□□□□□ -0.71
RAB9A-201ENST00000243325 HBBP68871 147 aa10.62□□□□□ -0.71
RAB9A-201ENST00000243325 ZNF664Q8N3J9 261 aa10.62□□□□□ -0.71
RAB9A-201ENST00000243325 A0A1B0GXF2 115 aa10.61□□□□□ -0.71
RAB9A-201ENST00000243325 F8W036 122 aa10.61□□□□□ -0.71
RAB9A-201ENST00000243325 C20orf78Q9BR46 151 aa10.61□□□□□ -0.71
RAB9A-201ENST00000243325 TRBV24-1A0A075B6N3 115 aa10.6□□□□□ -0.71
RAB9A-201ENST00000243325 D6R8Y8 96 aa10.6□□□□□ -0.71
RAB9A-201ENST00000243325 TNFRSF6BO95407 300 aa10.6□□□□□ -0.71
RAB9A-201ENST00000243325 SS18Q15532 418 aa10.6□□□□□ -0.71
RAB9A-201ENST00000243325 KRTAP10-4P60372 401 aaPredicted RBP10.59□□□□□ -0.71
RAB9A-201ENST00000243325 DPH3Q96FX2 82 aa10.59□□□□□ -0.71
RAB9A-201ENST00000243325 UBE2D4Q9Y2X8 147 aa10.59□□□□□ -0.71
RAB9A-201ENST00000243325 DMBT1Q9UGM3 2413 aaPredicted RBP10.59□□□□□ -0.71
RAB9A-201ENST00000243325 CHTF8P0CG12 524 aa10.58□□□□□ -0.72
RAB9A-201ENST00000243325 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
RAB9A-201ENST00000243325 GVQW2A0A096LPI5 108 aaPredicted RBP10.57□□□□□ -0.72
RAB9A-201ENST00000243325 NPYP01303 97 aa10.57□□□□□ -0.72
RAB9A-201ENST00000243325 RPL32P62910 135 aaKnown RBP10.57□□□□□ -0.72
RAB9A-201ENST00000243325 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
RAB9A-201ENST00000243325 PNRC1Q12796 327 aaPredicted RBP10.57□□□□□ -0.72
RAB9A-201ENST00000243325 CD164L2Q6UWJ8 174 aa10.57□□□□□ -0.72
RAB9A-201ENST00000243325 ATP5L2Q7Z4Y8 100 aa10.57□□□□□ -0.72
RAB9A-201ENST00000243325 TMEM18Q96B42 140 aa10.57□□□□□ -0.72
RAB9A-201ENST00000243325 CSDC2Q9Y534 153 aaKnown RBP10.57□□□□□ -0.72
RAB9A-201ENST00000243325 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
RAB9A-201ENST00000243325 MT-ND4LP03901 98 aa10.56□□□□□ -0.72
RAB9A-201ENST00000243325 COX6A2Q02221 97 aa10.56□□□□□ -0.72
RAB9A-201ENST00000243325 CIRBPQ14011 172 aaKnown RBP10.56□□□□□ -0.72
RAB9A-201ENST00000243325 CLLU1Q5K131 121 aa10.56□□□□□ -0.72
RAB9A-201ENST00000243325 LINC00526Q96FQ7 95 aa10.56□□□□□ -0.72
RAB9A-201ENST00000243325 SMIM2Q9BVW6 85 aa10.56□□□□□ -0.72
RAB9A-201ENST00000243325 PKHD1L1Q86WI1 4243 aa10.55□□□□□ -0.72
RAB9A-201ENST00000243325 TCAPO15273 167 aa10.55□□□□□ -0.72
RAB9A-201ENST00000243325 PPBPP02775 128 aa10.55□□□□□ -0.72
RAB9A-201ENST00000243325 RPL37AP61513 92 aaKnown RBP10.55□□□□□ -0.72
RAB9A-201ENST00000243325 RPL39P62891 51 aaKnown RBP10.55□□□□□ -0.72
RAB9A-201ENST00000243325 TMEM136Q6ZRR5 245 aa10.55□□□□□ -0.72
RAB9A-201ENST00000243325 ANAPC16Q96DE5 110 aa10.55□□□□□ -0.72
RAB9A-201ENST00000243325 TRAV13-1A0A0B4J241 112 aa10.54□□□□□ -0.72
RAB9A-201ENST00000243325 C1orf196B1AJZ1 125 aa10.54□□□□□ -0.72
RAB9A-201ENST00000243325 PHOX2AO14813 284 aa10.54□□□□□ -0.72
RAB9A-201ENST00000243325 Q6ZUT4 128 aa10.54□□□□□ -0.72
RAB9A-201ENST00000243325 ORMDL3Q8N138 153 aa10.54□□□□□ -0.72
RAB9A-201ENST00000243325 PRSS3P2Q8NHM4 247 aa10.54□□□□□ -0.72
RAB9A-201ENST00000243325 SPACA4Q8TDM5 124 aa10.54□□□□□ -0.72
RAB9A-201ENST00000243325 TIMM21Q9BVV7 248 aa10.54□□□□□ -0.72
RAB9A-201ENST00000243325 LRP1Q07954 4544 aaKnown RBP10.54□□□□□ -0.72
RAB9A-201ENST00000243325 FAT3Q8TDW7 4589 aa10.53□□□□□ -0.72
RAB9A-201ENST00000243325 A0A087WYN8 130 aa10.53□□□□□ -0.72
RAB9A-201ENST00000243325 J3QL48 77 aa10.53□□□□□ -0.72
RAB9A-201ENST00000243325 PRELID3AQ96N28 172 aa10.53□□□□□ -0.72
RAB9A-201ENST00000243325 IGKV2-24A0A0C4DH68 120 aa10.51□□□□□ -0.73
RAB9A-201ENST00000243325 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
RAB9A-201ENST00000243325 COX7A2LO14548 114 aa10.51□□□□□ -0.73
RAB9A-201ENST00000243325 MALP21145 153 aa10.51□□□□□ -0.73
RAB9A-201ENST00000243325 IFITM2Q01629 132 aa10.51□□□□□ -0.73
RAB9A-201ENST00000243325 OPRPNQ99935 248 aaPredicted RBP10.51□□□□□ -0.73
RAB9A-201ENST00000243325 LOC389332A0A1B0GUA5 103 aa10.5□□□□□ -0.73
RAB9A-201ENST00000243325 RAB5AP20339 215 aa10.5□□□□□ -0.73
RAB9A-201ENST00000243325 MAJINQ3KP22 176 aa10.5□□□□□ -0.73
RAB9A-201ENST00000243325 C5orf38Q86SI9 138 aa10.5□□□□□ -0.73
RAB9A-201ENST00000243325 FAM104AQ969W3 186 aa10.5□□□□□ -0.73
RAB9A-201ENST00000243325 KRTAP29-1A8MX34 341 aaPredicted RBP10.49□□□□□ -0.73
RAB9A-201ENST00000243325 CARD19Q96LW7 228 aa10.49□□□□□ -0.73
RAB9A-201ENST00000243325 SPANXA1Q9NS26 97 aa10.49□□□□□ -0.73
RAB9A-201ENST00000243325 PLAC8Q9NZF1 115 aa10.49□□□□□ -0.73
RAB9A-201ENST00000243325 IGLV4-69A0A075B6H9 119 aa10.48□□□□□ -0.73
RAB9A-201ENST00000243325 ADCYAP1P18509 176 aa10.48□□□□□ -0.73
RAB9A-201ENST00000243325 SYCNQ0VAF6 134 aa10.48□□□□□ -0.73
RAB9A-201ENST00000243325 A0A096LNI7 61 aa10.47□□□□□ -0.73
RAB9A-201ENST00000243325 TMEM218A2RU14 115 aa10.47□□□□□ -0.73
RAB9A-201ENST00000243325 HNRNPA3P51991 378 aaKnown RBP10.47□□□□□ -0.73
RAB9A-201ENST00000243325 MRPS36P82909 103 aaKnown RBP10.47□□□□□ -0.73
RAB9A-201ENST00000243325 UQCC3Q6UW78 93 aa10.47□□□□□ -0.73
RAB9A-201ENST00000243325 PRSS47A8MTI9 375 aa10.46□□□□□ -0.73
RAB9A-201ENST00000243325 STPG4Q8N801 248 aa10.46□□□□□ -0.73
RAB9A-201ENST00000243325 MAP1LC3AQ9H492 121 aa10.46□□□□□ -0.73
RAB9A-201ENST00000243325 LAMTOR2Q9Y2Q5 125 aa10.46□□□□□ -0.73
RAB9A-201ENST00000243325 IFITM10A6NMD0 228 aa10.44□□□□□ -0.74
RAB9A-201ENST00000243325 APOMO95445 188 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms