RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TSPEAR-AS2P59090 65 aa10.21□□□□□ -0.78
NFKB1-201ENST00000226574 C18orf65Q6ZTR6 163 aa10.21□□□□□ -0.78
NFKB1-201ENST00000226574 AVPP01185 164 aa10.2□□□□□ -0.78
NFKB1-201ENST00000226574 MRPL23Q16540 153 aaKnown RBP10.2□□□□□ -0.78
NFKB1-201ENST00000226574 HIST2H2BCQ6DN03 193 aa10.2□□□□□ -0.78
NFKB1-201ENST00000226574 TMEM223A0PJW6 202 aa10.2□□□□□ -0.78
NFKB1-201ENST00000226574 PCSK5Q92824 1860 aa10.2□□□□□ -0.78
NFKB1-201ENST00000226574 CRYGDP07320 174 aa10.2□□□□□ -0.78
NFKB1-201ENST00000226574 WFDC11Q8NEX6 87 aa10.2□□□□□ -0.78
NFKB1-201ENST00000226574 TRBV27A0A0K0K1C4 114 aa10.19□□□□□ -0.78
NFKB1-201ENST00000226574 NDUFA7O95182 113 aa10.19□□□□□ -0.78
NFKB1-201ENST00000226574 MIAQ16674 131 aa10.18□□□□□ -0.78
NFKB1-201ENST00000226574 WDFY3Q8IZQ1 3526 aa10.18□□□□□ -0.78
NFKB1-201ENST00000226574 GYPEP15421 78 aa10.18□□□□□ -0.78
NFKB1-201ENST00000226574 K7EQD1 137 aa10.18□□□□□ -0.78
NFKB1-201ENST00000226574 ATP6V0E2Q8NHE4 81 aa10.18□□□□□ -0.78
NFKB1-201ENST00000226574 DNAJC30Q96LL9 226 aa10.18□□□□□ -0.78
NFKB1-201ENST00000226574 TSHBP01222 138 aa10.17□□□□□ -0.78
NFKB1-201ENST00000226574 DAD1P61803 113 aa10.17□□□□□ -0.78
NFKB1-201ENST00000226574 IGLV2-18A0A075B6J9 118 aa10.17□□□□□ -0.78
NFKB1-201ENST00000226574 IGIPA6NJ69 53 aa10.17□□□□□ -0.78
NFKB1-201ENST00000226574 NDUFV3P56181 108 aaKnown RBP10.17□□□□□ -0.78
NFKB1-201ENST00000226574 C14orf132Q9NPU4 83 aa10.17□□□□□ -0.78
NFKB1-201ENST00000226574 MAP6D1Q9H9H5 199 aa10.17□□□□□ -0.78
NFKB1-201ENST00000226574 ZZEF1O43149 2961 aa10.16□□□□□ -0.78
NFKB1-201ENST00000226574 ZNF292O60281 2723 aa10.16□□□□□ -0.78
NFKB1-201ENST00000226574 SLPIP03973 132 aa10.16□□□□□ -0.78
NFKB1-201ENST00000226574 ZMAT4Q9H898 229 aa10.16□□□□□ -0.78
NFKB1-201ENST00000226574 LOC400499M0QZD8 3231 aa10.16□□□□□ -0.78
NFKB1-201ENST00000226574 ATMQ13315 3056 aa10.16□□□□□ -0.78
NFKB1-201ENST00000226574 POM121L12Q8N7R1 296 aa10.16□□□□□ -0.78
NFKB1-201ENST00000226574 TRAV25A0A0B4J276 109 aa10.15□□□□□ -0.78
NFKB1-201ENST00000226574 CHD6Q8TD26 2715 aa10.15□□□□□ -0.78
NFKB1-201ENST00000226574 KLLNB2CW77 178 aa10.15□□□□□ -0.78
NFKB1-201ENST00000226574 DAZ2Q13117 558 aaKnown RBP10.15□□□□□ -0.78
NFKB1-201ENST00000226574 DAZ4Q86SG3 579 aaKnown RBP10.15□□□□□ -0.78
NFKB1-201ENST00000226574 COX7B2Q8TF08 81 aa10.15□□□□□ -0.78
NFKB1-201ENST00000226574 DCANP1Q8TF63 244 aa10.15□□□□□ -0.78
NFKB1-201ENST00000226574 CITED2Q99967 270 aaPredicted RBP10.15□□□□□ -0.78
NFKB1-201ENST00000226574 DAZ3Q9NR90 486 aaKnown RBP10.15□□□□□ -0.78
NFKB1-201ENST00000226574 H3BT86 120 aa10.15□□□□□ -0.79
NFKB1-201ENST00000226574 UBL5Q9BZL1 73 aa10.15□□□□□ -0.79
NFKB1-201ENST00000226574 A0A0B4J2C4 111 aa10.14□□□□□ -0.79
NFKB1-201ENST00000226574 A0A1B0GX51 115 aa10.14□□□□□ -0.79
NFKB1-201ENST00000226574 J3QLI3 93 aa10.14□□□□□ -0.79
NFKB1-201ENST00000226574 ATRQ13535 2644 aa10.14□□□□□ -0.79
NFKB1-201ENST00000226574 WFDC10AQ9H1F0 79 aa10.14□□□□□ -0.79
NFKB1-201ENST00000226574 HECTD1Q9ULT8 2610 aa10.14□□□□□ -0.79
NFKB1-201ENST00000226574 OVOL2Q9BRP0 275 aa10.14□□□□□ -0.79
NFKB1-201ENST00000226574 TMEM126AQ9H061 195 aa10.14□□□□□ -0.79
NFKB1-201ENST00000226574 CITED1Q99966 193 aa10.13□□□□□ -0.79
NFKB1-201ENST00000226574 CMC4P56277 68 aaPredicted RBP10.13□□□□□ -0.79
NFKB1-201ENST00000226574 IGLV4-69A0A075B6H9 119 aa10.13□□□□□ -0.79
NFKB1-201ENST00000226574 UBE2D1P51668 147 aa10.12□□□□□ -0.79
NFKB1-201ENST00000226574 LINC00308Q8TCZ7 52 aa10.12□□□□□ -0.79
NFKB1-201ENST00000226574 SPATA25Q9BR10 227 aa10.12□□□□□ -0.79
NFKB1-201ENST00000226574 ZNF561-AS1K7EIQ3 104 aa10.12□□□□□ -0.79
NFKB1-201ENST00000226574 HERV-K104P63124 156 aa10.11□□□□□ -0.79
NFKB1-201ENST00000226574 SDIM1Q6ZPB5 146 aa10.11□□□□□ -0.79
NFKB1-201ENST00000226574 CCDC179H3BU77 68 aa10.11□□□□□ -0.79
NFKB1-201ENST00000226574 ORMDL1Q9P0S3 153 aa10.11□□□□□ -0.79
NFKB1-201ENST00000226574 LOC100131303A0A0U1RQF7 123 aa10.1□□□□□ -0.79
NFKB1-201ENST00000226574 PSMB8P28062 276 aa10.1□□□□□ -0.79
NFKB1-201ENST00000226574 PSMG3-AS1Q96PY0 264 aa10.1□□□□□ -0.79
NFKB1-201ENST00000226574 TRACP01848 142 aa10.1□□□□□ -0.79
NFKB1-201ENST00000226574 ADAMTSL4-AS1Q5T5F5 129 aa10.09□□□□□ -0.79
NFKB1-201ENST00000226574 NCR3O14931 201 aa10.09□□□□□ -0.79
NFKB1-201ENST00000226574 TRBV6-5A0A0K0K1A5 114 aa10.09□□□□□ -0.79
NFKB1-201ENST00000226574 DEFB105AQ8NG35 78 aa10.09□□□□□ -0.79
NFKB1-201ENST00000226574 DEFB135Q30KP9 77 aa10.08□□□□□ -0.8
NFKB1-201ENST00000226574 DEFB114Q30KQ6 69 aa10.08□□□□□ -0.8
NFKB1-201ENST00000226574 DEFB113Q30KQ7 82 aa10.08□□□□□ -0.8
NFKB1-201ENST00000226574 LINC00526Q96FQ7 95 aa10.08□□□□□ -0.8
NFKB1-201ENST00000226574 COX7A2LO14548 114 aa10.08□□□□□ -0.8
NFKB1-201ENST00000226574 TMEM263Q8WUH6 116 aaKnown RBP10.08□□□□□ -0.8
NFKB1-201ENST00000226574 COX8CQ7Z4L0 72 aa10.07□□□□□ -0.8
NFKB1-201ENST00000226574 Q9UF83 564 aa10.07□□□□□ -0.8
NFKB1-201ENST00000226574 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
NFKB1-201ENST00000226574 C9orf85Q96MD7 179 aa10.07□□□□□ -0.8
NFKB1-201ENST00000226574 H7C423 109 aa10.07□□□□□ -0.8
NFKB1-201ENST00000226574 DSCR8Q96T75 97 aa10.06□□□□□ -0.8
NFKB1-201ENST00000226574 ACYP1P07311 99 aa10.06□□□□□ -0.8
NFKB1-201ENST00000226574 MGAM2Q2M2H8 2515 aa10.05□□□□□ -0.8
NFKB1-201ENST00000226574 KLK12Q9UKR0 248 aa10.05□□□□□ -0.8
NFKB1-201ENST00000226574 H0YGX0 51 aa10.05□□□□□ -0.8
NFKB1-201ENST00000226574 IGLV1-40P01703 118 aa10.05□□□□□ -0.8
NFKB1-201ENST00000226574 PRB2P02812 416 aaPredicted RBP10.05□□□□□ -0.8
NFKB1-201ENST00000226574 UBE2D4Q9Y2X8 147 aa10.05□□□□□ -0.8
NFKB1-201ENST00000226574 TRAV23DV6A0A075B6W5 121 aa10.04□□□□□ -0.8
NFKB1-201ENST00000226574 IGHV4-28A0A0C4DH34 117 aa10.04□□□□□ -0.8
NFKB1-201ENST00000226574 UBE2D3P61077 147 aa10.04□□□□□ -0.8
NFKB1-201ENST00000226574 UBE2D2P62837 147 aa10.04□□□□□ -0.8
NFKB1-201ENST00000226574 C16orf74Q96GX8 76 aa10.04□□□□□ -0.8
NFKB1-201ENST00000226574 Q6ZSN1 163 aa10.04□□□□□ -0.8
NFKB1-201ENST00000226574 COL4A2P08572 1712 aa10.03□□□□□ -0.8
NFKB1-201ENST00000226574 SMCPP49901 116 aaPredicted RBP10.03□□□□□ -0.8
NFKB1-201ENST00000226574 DEFB121Q5J5C9 76 aa10.03□□□□□ -0.8
NFKB1-201ENST00000226574 LINC00643Q86TS7 51 aa10.03□□□□□ -0.8
NFKB1-201ENST00000226574 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
NFKB1-201ENST00000226574 RNF152Q8N8N0 203 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms