RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 LINC00308Q8TCZ7 52 aa9.81□□□□□ -0.84
COL1A1-201ENST00000225964 M0QY20 66 aa9.81□□□□□ -0.84
COL1A1-201ENST00000225964 CCKP06307 115 aa9.81□□□□□ -0.84
COL1A1-201ENST00000225964 MUC6Q6W4X9 2439 aa9.81□□□□□ -0.84
COL1A1-201ENST00000225964 LINC00574Q9H8X3 128 aa9.81□□□□□ -0.84
COL1A1-201ENST00000225964 IGHV4-30-4P0DP06 118 aa9.8□□□□□ -0.84
COL1A1-201ENST00000225964 C6orf99Q4VX62 202 aa9.8□□□□□ -0.84
COL1A1-201ENST00000225964 LELP1Q5T871 98 aa9.8□□□□□ -0.84
COL1A1-201ENST00000225964 A0A1B0GXF2 115 aa9.8□□□□□ -0.84
COL1A1-201ENST00000225964 NUPR2A6NF83 97 aa9.8□□□□□ -0.84
COL1A1-201ENST00000225964 OXLD1Q5BKU9 147 aa9.8□□□□□ -0.84
COL1A1-201ENST00000225964 SMR3AQ99954 134 aa9.79□□□□□ -0.84
COL1A1-201ENST00000225964 IGLV2-8P01709 118 aa9.79□□□□□ -0.84
COL1A1-201ENST00000225964 RETNQ9HD89 108 aa9.79□□□□□ -0.84
COL1A1-201ENST00000225964 PCNX2A6NKB5 2137 aa9.79□□□□□ -0.84
COL1A1-201ENST00000225964 M0R378 163 aa9.79□□□□□ -0.84
COL1A1-201ENST00000225964 RBX1P62877 108 aa9.79□□□□□ -0.84
COL1A1-201ENST00000225964 DHRS4-AS1Q9P1J3 65 aa9.79□□□□□ -0.84
COL1A1-201ENST00000225964 WFDC13Q8IUB5 93 aa9.78□□□□□ -0.84
COL1A1-201ENST00000225964 G3V4G9 280 aa9.78□□□□□ -0.84
COL1A1-201ENST00000225964 CD164L2Q6UWJ8 174 aa9.78□□□□□ -0.84
COL1A1-201ENST00000225964 ALPK3Q96L96 1907 aa9.78□□□□□ -0.84
COL1A1-201ENST00000225964 C20orf197Q8N268 126 aa9.78□□□□□ -0.84
COL1A1-201ENST00000225964 C11orf1Q9H5F2 150 aa9.78□□□□□ -0.84
COL1A1-201ENST00000225964 PRM2P04554 102 aa9.78□□□□□ -0.84
COL1A1-201ENST00000225964 P0C879 139 aa9.77□□□□□ -0.85
COL1A1-201ENST00000225964 A8MZ25 164 aa9.77□□□□□ -0.85
COL1A1-201ENST00000225964 LINC00474Q9P2X8 69 aa9.77□□□□□ -0.85
COL1A1-201ENST00000225964 SPATA12Q7Z6I5 190 aa9.77□□□□□ -0.85
COL1A1-201ENST00000225964 EBI3Q14213 229 aa9.76□□□□□ -0.85
COL1A1-201ENST00000225964 SERP1Q9Y6X1 66 aa9.76□□□□□ -0.85
COL1A1-201ENST00000225964 TANC2Q9HCD6 1990 aa9.76□□□□□ -0.85
COL1A1-201ENST00000225964 PLCE1Q9P212 2302 aa9.76□□□□□ -0.85
COL1A1-201ENST00000225964 TRBV6-5A0A0K0K1A5 114 aa9.76□□□□□ -0.85
COL1A1-201ENST00000225964 LINC00959A0A1B0GUT2 108 aa9.76□□□□□ -0.85
COL1A1-201ENST00000225964 Q6ZS46 218 aa9.76□□□□□ -0.85
COL1A1-201ENST00000225964 DSCAMO60469 2012 aa9.76□□□□□ -0.85
COL1A1-201ENST00000225964 FSTL3O95633 263 aa9.75□□□□□ -0.85
COL1A1-201ENST00000225964 BRWD1-AS2P59051 145 aa9.75□□□□□ -0.85
COL1A1-201ENST00000225964 CRIP1P50238 77 aa9.75□□□□□ -0.85
COL1A1-201ENST00000225964 TRIAP1O43715 76 aa9.75□□□□□ -0.85
COL1A1-201ENST00000225964 FAM236DA0A1B0GTK5 79 aa9.74□□□□□ -0.85
COL1A1-201ENST00000225964 FAM236CP0DP71 79 aa9.74□□□□□ -0.85
COL1A1-201ENST00000225964 RNF185Q96GF1 192 aa9.74□□□□□ -0.85
COL1A1-201ENST00000225964 A0A0U1RQV1 116 aa9.74□□□□□ -0.85
COL1A1-201ENST00000225964 IGLV5-52A0A0A0MRZ9 124 aa9.73□□□□□ -0.85
COL1A1-201ENST00000225964 TSHBP01222 138 aa9.73□□□□□ -0.85
COL1A1-201ENST00000225964 CIRBP-AS1Q8TBR5 109 aa9.73□□□□□ -0.85
COL1A1-201ENST00000225964 DSCAML1Q8TD84 2053 aa9.73□□□□□ -0.85
COL1A1-201ENST00000225964 C10orf25Q5T742 122 aa9.73□□□□□ -0.85
COL1A1-201ENST00000225964 FAM30AQ9NZY2 134 aa9.72□□□□□ -0.85
COL1A1-201ENST00000225964 ATP5EP2Q5VTU8 51 aa9.72□□□□□ -0.85
COL1A1-201ENST00000225964 MAPKAPK5-AS1Q8N8E1 139 aa9.72□□□□□ -0.85
COL1A1-201ENST00000225964 PTPRQQ9UMZ3 2332 aa9.72□□□□□ -0.85
COL1A1-201ENST00000225964 EIF4EBP1Q13541 118 aaPredicted RBP9.72□□□□□ -0.85
COL1A1-201ENST00000225964 RNASE8Q8TDE3 154 aaKnown RBP9.71□□□□□ -0.85
COL1A1-201ENST00000225964 Q6ZQY7 126 aa9.71□□□□□ -0.85
COL1A1-201ENST00000225964 ZFHX2Q9C0A1 2572 aaPredicted RBP9.71□□□□□ -0.86
COL1A1-201ENST00000225964 Q6ZVQ6 151 aa9.71□□□□□ -0.86
COL1A1-201ENST00000225964 Q6ZPA2 131 aa9.71□□□□□ -0.86
COL1A1-201ENST00000225964 M0QXV9 152 aa9.7□□□□□ -0.86
COL1A1-201ENST00000225964 MBD6Q96DN6 1003 aa9.7□□□□□ -0.86
COL1A1-201ENST00000225964 SNURFQ9Y675 71 aa9.7□□□□□ -0.86
COL1A1-201ENST00000225964 NDUFV3P56181 108 aaKnown RBP9.7□□□□□ -0.86
COL1A1-201ENST00000225964 PRR9Q5T870 116 aa9.7□□□□□ -0.86
COL1A1-201ENST00000225964 NBASA2RRP1 2371 aa9.69□□□□□ -0.86
COL1A1-201ENST00000225964 SPTAN1Q13813 2472 aaKnown RBP9.69□□□□□ -0.86
COL1A1-201ENST00000225964 NDUFC2-KCTD14E9PQ53 114 aa9.69□□□□□ -0.86
COL1A1-201ENST00000225964 RNASE3P12724 160 aaKnown RBP9.69□□□□□ -0.86
COL1A1-201ENST00000225964 SMIM11BQ8TCY0 68 aa9.69□□□□□ -0.86
COL1A1-201ENST00000225964 TRBV30A0A0K0K1B3 111 aa9.69□□□□□ -0.86
COL1A1-201ENST00000225964 RETNLBQ9BQ08 111 aa9.69□□□□□ -0.86
COL1A1-201ENST00000225964 U3KQK5 164 aa9.69□□□□□ -0.86
COL1A1-201ENST00000225964 MT-ATP8P03928 68 aa9.69□□□□□ -0.86
COL1A1-201ENST00000225964 MRGPRG-AS1Q2M3A8 158 aa9.69□□□□□ -0.86
COL1A1-201ENST00000225964 GPR179Q6PRD1 2367 aa9.68□□□□□ -0.86
COL1A1-201ENST00000225964 Q8N9L7 120 aa9.68□□□□□ -0.86
COL1A1-201ENST00000225964 PYGO1Q9Y3Y4 419 aa9.68□□□□□ -0.86
COL1A1-201ENST00000225964 BRI3O95415 125 aa9.68□□□□□ -0.86
COL1A1-201ENST00000225964 COX17Q14061 63 aa9.68□□□□□ -0.86
COL1A1-201ENST00000225964 RPL28P46779 137 aaKnown RBP9.68□□□□□ -0.86
COL1A1-201ENST00000225964 IGLV1-40P01703 118 aa9.67□□□□□ -0.86
COL1A1-201ENST00000225964 PRR4Q16378 134 aa9.67□□□□□ -0.86
COL1A1-201ENST00000225964 TRBV27A0A0K0K1C4 114 aa9.67□□□□□ -0.86
COL1A1-201ENST00000225964 NOTCH3Q9UM47 2321 aa9.67□□□□□ -0.86
COL1A1-201ENST00000225964 TECTAO75443 2155 aa9.67□□□□□ -0.86
COL1A1-201ENST00000225964 TP73-AS1Q9UF72 201 aa9.67□□□□□ -0.86
COL1A1-201ENST00000225964 ZNF73O43830 326 aaPredicted RBP9.67□□□□□ -0.86
COL1A1-201ENST00000225964 NDUFA7O95182 113 aa9.67□□□□□ -0.86
COL1A1-201ENST00000225964 Q8N6K4 173 aa9.67□□□□□ -0.86
COL1A1-201ENST00000225964 TNCP24821 2201 aa9.66□□□□□ -0.86
COL1A1-201ENST00000225964 UQCRQO14949 82 aa9.66□□□□□ -0.86
COL1A1-201ENST00000225964 EDN2P20800 178 aa9.66□□□□□ -0.86
COL1A1-201ENST00000225964 MED12LQ86YW9 2145 aa9.66□□□□□ -0.86
COL1A1-201ENST00000225964 RAI1Q7Z5J4 1906 aaPredicted RBP9.65□□□□□ -0.86
COL1A1-201ENST00000225964 CYSRT1A8MQ03 144 aa9.65□□□□□ -0.86
COL1A1-201ENST00000225964 IGLV2-11P01706 119 aa9.65□□□□□ -0.86
COL1A1-201ENST00000225964 MRPL55Q7Z7F7 128 aaKnown RBP9.65□□□□□ -0.86
COL1A1-201ENST00000225964 ZNF295-AS1Q8N0V1 137 aa9.65□□□□□ -0.86
COL1A1-201ENST00000225964 FAM240AA0A1B0GVK7 77 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms