RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 FAM104AQ969W3 186 aa12.51□□□□□ -0.41
H2AFV-201ENST00000222690 TEX15Q9BXT5 2789 aa12.51□□□□□ -0.41
H2AFV-201ENST00000222690 TRGV1A0A0A0MS02 117 aa12.5□□□□□ -0.41
H2AFV-201ENST00000222690 TINCRA0A1B0GVN0 87 aa12.5□□□□□ -0.41
H2AFV-201ENST00000222690 SPANXA1Q9NS26 97 aa12.5□□□□□ -0.41
H2AFV-201ENST00000222690 FBN2P35556 2912 aa12.5□□□□□ -0.41
H2AFV-201ENST00000222690 LINC01356Q8N9X3 169 aa12.5□□□□□ -0.41
H2AFV-201ENST00000222690 YAE1D1Q9NRH1 226 aa12.5□□□□□ -0.41
H2AFV-201ENST00000222690 VPREB3Q9UKI3 123 aa12.49□□□□□ -0.41
H2AFV-201ENST00000222690 FN1P02751 2386 aaKnown RBP12.49□□□□□ -0.41
H2AFV-201ENST00000222690 ZNF462Q96JM2 2506 aa12.49□□□□□ -0.41
H2AFV-201ENST00000222690 IFITM1P13164 125 aa12.49□□□□□ -0.41
H2AFV-201ENST00000222690 NDUFV3P56181 108 aaKnown RBP12.49□□□□□ -0.41
H2AFV-201ENST00000222690 GAGE5Q13069 117 aa12.49□□□□□ -0.41
H2AFV-201ENST00000222690 GAGE6Q13070 117 aa12.49□□□□□ -0.41
H2AFV-201ENST00000222690 A0A1W2PRX2 142 aa12.48□□□□□ -0.41
H2AFV-201ENST00000222690 COX6A2Q02221 97 aa12.48□□□□□ -0.41
H2AFV-201ENST00000222690 TMEM101Q96IK0 257 aa12.48□□□□□ -0.41
H2AFV-201ENST00000222690 PRIMA1Q86XR5 153 aa12.47□□□□□ -0.41
H2AFV-201ENST00000222690 CITED1Q99966 193 aa12.47□□□□□ -0.41
H2AFV-201ENST00000222690 SPANXDQ9BXN6 97 aa12.47□□□□□ -0.41
H2AFV-201ENST00000222690 SPANXCQ9NY87 97 aa12.47□□□□□ -0.41
H2AFV-201ENST00000222690 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.47□□□□□ -0.41
H2AFV-201ENST00000222690 MTORP42345 2549 aa12.46□□□□□ -0.42
H2AFV-201ENST00000222690 IGSF10Q6WRI0 2623 aa12.45□□□□□ -0.42
H2AFV-201ENST00000222690 CCDC179H3BU77 68 aa12.45□□□□□ -0.42
H2AFV-201ENST00000222690 INSP01308 110 aa12.45□□□□□ -0.42
H2AFV-201ENST00000222690 ZNF702PQ9H963 129 aa12.45□□□□□ -0.42
H2AFV-201ENST00000222690 MAP6D1Q9H9H5 199 aa12.45□□□□□ -0.42
H2AFV-201ENST00000222690 NF1P21359 2839 aa12.45□□□□□ -0.42
H2AFV-201ENST00000222690 TOMM7Q9P0U1 55 aa12.44□□□□□ -0.42
H2AFV-201ENST00000222690 GAGE12JA6NER3 117 aa12.44□□□□□ -0.42
H2AFV-201ENST00000222690 LINC00694P0DN24 101 aa12.44□□□□□ -0.42
H2AFV-201ENST00000222690 GAGE4Q13068 117 aa12.44□□□□□ -0.42
H2AFV-201ENST00000222690 LST1O00453 97 aa12.44□□□□□ -0.42
H2AFV-201ENST00000222690 PEMTQ9UBM1 199 aa12.44□□□□□ -0.42
H2AFV-201ENST00000222690 TMEM89A2RUT3 159 aa12.43□□□□□ -0.42
H2AFV-201ENST00000222690 C3orf56Q8N813 242 aa12.43□□□□□ -0.42
H2AFV-201ENST00000222690 H3BT86 120 aa12.43□□□□□ -0.42
H2AFV-201ENST00000222690 GAGE7O76087 117 aa12.43□□□□□ -0.42
H2AFV-201ENST00000222690 GAGE12FP0CL80 117 aa12.43□□□□□ -0.42
H2AFV-201ENST00000222690 GAGE12GP0CL81 117 aa12.43□□□□□ -0.42
H2AFV-201ENST00000222690 GAGE12IP0CL82 117 aa12.43□□□□□ -0.42
H2AFV-201ENST00000222690 NHLRC4P0CG21 123 aaPredicted RBP12.42□□□□□ -0.42
H2AFV-201ENST00000222690 STHQ8IWL8 128 aa12.42□□□□□ -0.42
H2AFV-201ENST00000222690 LINC00308Q8TCZ7 52 aa12.42□□□□□ -0.42
H2AFV-201ENST00000222690 PRORYQ9H606 182 aa12.42□□□□□ -0.42
H2AFV-201ENST00000222690 M0QXV9 152 aa12.4□□□□□ -0.42
H2AFV-201ENST00000222690 PIK3CD-AS1Q5SR53 167 aa12.4□□□□□ -0.42
H2AFV-201ENST00000222690 NDUFA1O15239 70 aa12.4□□□□□ -0.42
H2AFV-201ENST00000222690 HERVK_113P63121 156 aa12.4□□□□□ -0.42
H2AFV-201ENST00000222690 RPL36AP83881 106 aaKnown RBP12.4□□□□□ -0.42
H2AFV-201ENST00000222690 LINC00242Q5T6M2 205 aa12.4□□□□□ -0.42
H2AFV-201ENST00000222690 RPL36ALQ969Q0 106 aaKnown RBP12.4□□□□□ -0.42
H2AFV-201ENST00000222690 UBE2L6O14933 153 aa12.39□□□□□ -0.43
H2AFV-201ENST00000222690 CITED2Q99967 270 aaPredicted RBP12.39□□□□□ -0.43
H2AFV-201ENST00000222690 Q8N2B8 174 aa12.39□□□□□ -0.43
H2AFV-201ENST00000222690 Q6ZTI0 123 aa12.39□□□□□ -0.43
H2AFV-201ENST00000222690 C11orf72Q8NBR9 251 aa12.39□□□□□ -0.43
H2AFV-201ENST00000222690 CHCHD5Q9BSY4 110 aa12.38□□□□□ -0.43
H2AFV-201ENST00000222690 ACANP16112 2415 aa12.38□□□□□ -0.43
H2AFV-201ENST00000222690 NIPBLQ6KC79 2804 aaeCLIP12.38□□□□□ -0.43
H2AFV-201ENST00000222690 DSCR9P59020 149 aa12.37□□□□□ -0.43
H2AFV-201ENST00000222690 Q6YL49 198 aa12.37□□□□□ -0.43
H2AFV-201ENST00000222690 DNAJC30Q96LL9 226 aa12.37□□□□□ -0.43
H2AFV-201ENST00000222690 NOP10Q9NPE3 64 aaKnown RBP12.36□□□□□ -0.43
H2AFV-201ENST00000222690 TRGV2A0A075B6R0 118 aa12.36□□□□□ -0.43
H2AFV-201ENST00000222690 TIRAPP58753 221 aa12.36□□□□□ -0.43
H2AFV-201ENST00000222690 DEFB114Q30KQ6 69 aa12.35□□□□□ -0.43
H2AFV-201ENST00000222690 SOSTDC1Q6X4U4 206 aa12.35□□□□□ -0.43
H2AFV-201ENST00000222690 Q9HAA7 133 aa12.35□□□□□ -0.43
H2AFV-201ENST00000222690 SMIM1B2RUZ4 78 aa12.35□□□□□ -0.43
H2AFV-201ENST00000222690 RS1O15537 224 aa12.34□□□□□ -0.43
H2AFV-201ENST00000222690 EDA2RQ9HAV5 297 aa12.34□□□□□ -0.43
H2AFV-201ENST00000222690 COX7A2LO14548 114 aa12.33□□□□□ -0.44
H2AFV-201ENST00000222690 TIMM17BO60830 172 aa12.33□□□□□ -0.44
H2AFV-201ENST00000222690 BAALC-AS2P0C853 105 aa12.33□□□□□ -0.44
H2AFV-201ENST00000222690 C11orf68Q9H3H3 251 aaKnown RBP12.33□□□□□ -0.44
H2AFV-201ENST00000222690 J3QLI3 93 aa12.33□□□□□ -0.44
H2AFV-201ENST00000222690 DAZ2Q13117 558 aaKnown RBP12.33□□□□□ -0.44
H2AFV-201ENST00000222690 DAZ4Q86SG3 579 aaKnown RBP12.33□□□□□ -0.44
H2AFV-201ENST00000222690 DAZ3Q9NR90 486 aaKnown RBP12.33□□□□□ -0.44
H2AFV-201ENST00000222690 PRB1P04280 392 aa12.32□□□□□ -0.44
H2AFV-201ENST00000222690 K7EQD1 137 aa12.32□□□□□ -0.44
H2AFV-201ENST00000222690 ODF3L2Q3SX64 289 aa12.32□□□□□ -0.44
H2AFV-201ENST00000222690 FAM236AA0A1B0GUQ0 79 aa12.32□□□□□ -0.44
H2AFV-201ENST00000222690 FAM236BA0A1B0GV22 79 aa12.32□□□□□ -0.44
H2AFV-201ENST00000222690 RPL35AP18077 110 aaKnown RBP12.32□□□□□ -0.44
H2AFV-201ENST00000222690 LINC00158P58513 81 aa12.32□□□□□ -0.44
H2AFV-201ENST00000222690 NTM-AS1Q6ZSK4 140 aa12.32□□□□□ -0.44
H2AFV-201ENST00000222690 GAGE2AQ6NT46 116 aa12.31□□□□□ -0.44
H2AFV-201ENST00000222690 LOC100131303A0A0U1RQF7 123 aa12.31□□□□□ -0.44
H2AFV-201ENST00000222690 C1orf158Q8N1D5 194 aa12.31□□□□□ -0.44
H2AFV-201ENST00000222690 SMIM20Q8N5G0 67 aa12.31□□□□□ -0.44
H2AFV-201ENST00000222690 COPS9Q8WXC6 57 aa12.3□□□□□ -0.44
H2AFV-201ENST00000222690 BEAN1Q3B7T3 259 aa12.3□□□□□ -0.44
H2AFV-201ENST00000222690 IGHV4-31P0DP07 118 aa12.3□□□□□ -0.44
H2AFV-201ENST00000222690 PFN2P35080 140 aa12.3□□□□□ -0.44
H2AFV-201ENST00000222690 CRPP02741 224 aa12.29□□□□□ -0.44
H2AFV-201ENST00000222690 RNF152Q8N8N0 203 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms