RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 J3QLI3 93 aa13.33□□□□□ -0.28
CACTIN-201ENST00000221899 INSP01308 110 aa13.33□□□□□ -0.28
CACTIN-201ENST00000221899 LINC00694P0DN24 101 aa13.33□□□□□ -0.28
CACTIN-201ENST00000221899 IGSF10Q6WRI0 2623 aa13.33□□□□□ -0.28
CACTIN-201ENST00000221899 LST1O00453 97 aa13.32□□□□□ -0.28
CACTIN-201ENST00000221899 NDUFA1O15239 70 aa13.32□□□□□ -0.28
CACTIN-201ENST00000221899 CITED2Q99967 270 aaPredicted RBP13.32□□□□□ -0.28
CACTIN-201ENST00000221899 PEMTQ9UBM1 199 aa13.32□□□□□ -0.28
CACTIN-201ENST00000221899 NHLRC4P0CG21 123 aaPredicted RBP13.32□□□□□ -0.28
CACTIN-201ENST00000221899 TTC32Q5I0X7 151 aa13.32□□□□□ -0.28
CACTIN-201ENST00000221899 DNAJC30Q96LL9 226 aa13.32□□□□□ -0.28
CACTIN-201ENST00000221899 NOTCH3Q9UM47 2321 aa13.31□□□□□ -0.28
CACTIN-201ENST00000221899 TRAV13-1A0A0B4J241 112 aa13.31□□□□□ -0.28
CACTIN-201ENST00000221899 RS1O15537 224 aa13.31□□□□□ -0.28
CACTIN-201ENST00000221899 TRGV1A0A0A0MS02 117 aa13.31□□□□□ -0.28
CACTIN-201ENST00000221899 PIK3CD-AS1Q5SR53 167 aa13.31□□□□□ -0.28
CACTIN-201ENST00000221899 LINC01600Q96MT4 127 aa13.31□□□□□ -0.28
CACTIN-201ENST00000221899 WNK1Q9H4A3 2382 aa13.3□□□□□ -0.28
CACTIN-201ENST00000221899 H3BT86 120 aa13.3□□□□□ -0.28
CACTIN-201ENST00000221899 BEAN1Q3B7T3 259 aa13.3□□□□□ -0.28
CACTIN-201ENST00000221899 LINC00242Q5T6M2 205 aa13.3□□□□□ -0.28
CACTIN-201ENST00000221899 CACNA1AO00555 2505 aa13.3□□□□□ -0.28
CACTIN-201ENST00000221899 TIMM17BO60830 172 aa13.3□□□□□ -0.28
CACTIN-201ENST00000221899 IFITM1P13164 125 aa13.3□□□□□ -0.28
CACTIN-201ENST00000221899 TIRAPP58753 221 aa13.3□□□□□ -0.28
CACTIN-201ENST00000221899 LINC00308Q8TCZ7 52 aa13.3□□□□□ -0.28
CACTIN-201ENST00000221899 TEX15Q9BXT5 2789 aa13.3□□□□□ -0.28
CACTIN-201ENST00000221899 NDUFV3P56181 108 aaKnown RBP13.29□□□□□ -0.28
CACTIN-201ENST00000221899 CIRBPQ14011 172 aaKnown RBP13.29□□□□□ -0.28
CACTIN-201ENST00000221899 IGLV5-45A0A087WSX0 123 aa13.29□□□□□ -0.28
CACTIN-201ENST00000221899 DEFB114Q30KQ6 69 aa13.29□□□□□ -0.28
CACTIN-201ENST00000221899 SVIPQ8NHG7 77 aa13.29□□□□□ -0.28
CACTIN-201ENST00000221899 IGHV4-31P0DP07 118 aa13.28□□□□□ -0.28
CACTIN-201ENST00000221899 C2CD3Q4AC94 2353 aa13.28□□□□□ -0.28
CACTIN-201ENST00000221899 PIEZO1Q92508 2521 aa13.28□□□□□ -0.28
CACTIN-201ENST00000221899 CHD6Q8TD26 2715 aa13.28□□□□□ -0.28
CACTIN-201ENST00000221899 FSHBP01225 129 aa13.27□□□□□ -0.28
CACTIN-201ENST00000221899 C11orf44Q8N8P7 122 aa13.27□□□□□ -0.28
CACTIN-201ENST00000221899 SS18L2Q9UHA2 77 aa13.27□□□□□ -0.28
CACTIN-201ENST00000221899 B5MCH6 92 aa13.26□□□□□ -0.29
CACTIN-201ENST00000221899 HERVK_113P63121 156 aa13.26□□□□□ -0.29
CACTIN-201ENST00000221899 SOSTDC1Q6X4U4 206 aa13.26□□□□□ -0.29
CACTIN-201ENST00000221899 C4orf3Q8WVX3 66 aa13.26□□□□□ -0.29
CACTIN-201ENST00000221899 TLN2Q9Y4G6 2542 aa13.26□□□□□ -0.29
CACTIN-201ENST00000221899 SMIM1B2RUZ4 78 aa13.26□□□□□ -0.29
CACTIN-201ENST00000221899 MEIG1Q5JSS6 88 aa13.26□□□□□ -0.29
CACTIN-201ENST00000221899 Q8N2B8 174 aa13.26□□□□□ -0.29
CACTIN-201ENST00000221899 PTPN13Q12923 2485 aa13.25□□□□□ -0.29
CACTIN-201ENST00000221899 IGLV5-39A0A0G2JS06 123 aa13.25□□□□□ -0.29
CACTIN-201ENST00000221899 ODF3L2Q3SX64 289 aa13.25□□□□□ -0.29
CACTIN-201ENST00000221899 NTM-AS1Q6ZSK4 140 aa13.25□□□□□ -0.29
CACTIN-201ENST00000221899 C1orf158Q8N1D5 194 aa13.25□□□□□ -0.29
CACTIN-201ENST00000221899 Q6ZTI0 123 aa13.25□□□□□ -0.29
CACTIN-201ENST00000221899 ABCA12Q86UK0 2595 aa13.24□□□□□ -0.29
CACTIN-201ENST00000221899 A0A1W2PRX2 142 aa13.24□□□□□ -0.29
CACTIN-201ENST00000221899 GAGE12JA6NER3 117 aa13.24□□□□□ -0.29
CACTIN-201ENST00000221899 GAGE4Q13068 117 aa13.24□□□□□ -0.29
CACTIN-201ENST00000221899 GAGE5Q13069 117 aa13.24□□□□□ -0.29
CACTIN-201ENST00000221899 GAGE6Q13070 117 aa13.24□□□□□ -0.29
CACTIN-201ENST00000221899 PRIMA1Q86XR5 153 aa13.24□□□□□ -0.29
CACTIN-201ENST00000221899 STHQ8IWL8 128 aa13.24□□□□□ -0.29
CACTIN-201ENST00000221899 CR1P17927 2039 aa13.23□□□□□ -0.29
CACTIN-201ENST00000221899 CCDC179H3BU77 68 aa13.22□□□□□ -0.29
CACTIN-201ENST00000221899 EPG5Q9HCE0 2579 aa13.22□□□□□ -0.29
CACTIN-201ENST00000221899 LRRK2Q5S007 2527 aa13.22□□□□□ -0.29
CACTIN-201ENST00000221899 KRTAP10-9P60411 292 aa13.22□□□□□ -0.29
CACTIN-201ENST00000221899 RPL36AP83881 106 aaKnown RBP13.22□□□□□ -0.29
CACTIN-201ENST00000221899 RPL36ALQ969Q0 106 aaKnown RBP13.22□□□□□ -0.29
CACTIN-201ENST00000221899 K7EQD1 137 aa13.21□□□□□ -0.29
CACTIN-201ENST00000221899 NAV2Q8IVL1 2488 aa13.21□□□□□ -0.29
CACTIN-201ENST00000221899 SONP18583 2426 aaKnown RBP13.2□□□□□ -0.3
CACTIN-201ENST00000221899 ZFYVE26Q68DK2 2539 aa13.2□□□□□ -0.3
CACTIN-201ENST00000221899 PRB1P04280 392 aa13.2□□□□□ -0.3
CACTIN-201ENST00000221899 COX7A2LO14548 114 aa13.19□□□□□ -0.3
CACTIN-201ENST00000221899 Q6Q795 121 aa13.19□□□□□ -0.3
CACTIN-201ENST00000221899 NOP10Q9NPE3 64 aaKnown RBP13.18□□□□□ -0.3
CACTIN-201ENST00000221899 F5H768 121 aa13.18□□□□□ -0.3
CACTIN-201ENST00000221899 DEFB121Q5J5C9 76 aa13.18□□□□□ -0.3
CACTIN-201ENST00000221899 IL17DQ8TAD2 202 aa13.18□□□□□ -0.3
CACTIN-201ENST00000221899 Q96MF0 132 aa13.18□□□□□ -0.3
CACTIN-201ENST00000221899 CDC42SE2Q9NRR3 84 aa13.18□□□□□ -0.3
CACTIN-201ENST00000221899 IGKV3OR2-268A0A0C4DH90 116 aa13.17□□□□□ -0.3
CACTIN-201ENST00000221899 GAGE7O76087 117 aa13.17□□□□□ -0.3
CACTIN-201ENST00000221899 GAGE12FP0CL80 117 aa13.17□□□□□ -0.3
CACTIN-201ENST00000221899 GAGE12GP0CL81 117 aa13.17□□□□□ -0.3
CACTIN-201ENST00000221899 GAGE12IP0CL82 117 aa13.17□□□□□ -0.3
CACTIN-201ENST00000221899 JMJD1CQ15652 2540 aa13.17□□□□□ -0.3
CACTIN-201ENST00000221899 AKAP9Q99996 3911 aa13.17□□□□□ -0.3
CACTIN-201ENST00000221899 LOC100131303A0A0U1RQF7 123 aa13.16□□□□□ -0.3
CACTIN-201ENST00000221899 DAZ2Q13117 558 aaKnown RBP13.16□□□□□ -0.3
CACTIN-201ENST00000221899 SHISA2Q6UWI4 295 aa13.16□□□□□ -0.3
CACTIN-201ENST00000221899 DAZ4Q86SG3 579 aaKnown RBP13.16□□□□□ -0.3
CACTIN-201ENST00000221899 DAZ3Q9NR90 486 aaKnown RBP13.16□□□□□ -0.3
CACTIN-201ENST00000221899 ZNF462Q96JM2 2506 aa13.16□□□□□ -0.3
CACTIN-201ENST00000221899 NIPBLQ6KC79 2804 aaeCLIP13.16□□□□□ -0.3
CACTIN-201ENST00000221899 NF1P21359 2839 aa13.15□□□□□ -0.3
CACTIN-201ENST00000221899 SETD2Q9BYW2 2564 aaPredicted RBP13.15□□□□□ -0.3
CACTIN-201ENST00000221899 FAM240AA0A1B0GVK7 77 aa13.15□□□□□ -0.3
CACTIN-201ENST00000221899 UBE2L6O14933 153 aa13.15□□□□□ -0.3
CACTIN-201ENST00000221899 FAM218AQ96MZ4 157 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms