RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 AP1S3Q96PC3 154 aa9.9□□□□□ -0.82
UPK3A-201ENST00000216211 C12orf57Q99622 126 aa9.9□□□□□ -0.82
UPK3A-201ENST00000216211 KIF25-AS1Q9Y6Z4 181 aa9.9□□□□□ -0.82
UPK3A-201ENST00000216211 PRSS47A8MTI9 375 aa9.89□□□□□ -0.83
UPK3A-201ENST00000216211 SMKR1H3BMG3 65 aa9.89□□□□□ -0.83
UPK3A-201ENST00000216211 NPYP01303 97 aa9.89□□□□□ -0.83
UPK3A-201ENST00000216211 JOSD1Q15040 202 aaPredicted RBP9.89□□□□□ -0.83
UPK3A-201ENST00000216211 PYY3Q5JQD4 70 aa9.89□□□□□ -0.83
UPK3A-201ENST00000216211 TNFRSF6BO95407 300 aa9.88□□□□□ -0.83
UPK3A-201ENST00000216211 NCR2O95944 276 aa9.88□□□□□ -0.83
UPK3A-201ENST00000216211 PRSS3P2Q8NHM4 247 aa9.88□□□□□ -0.83
UPK3A-201ENST00000216211 MAP1LC3AQ9H492 121 aa9.88□□□□□ -0.83
UPK3A-201ENST00000216211 KLK12Q9UKR0 248 aa9.88□□□□□ -0.83
UPK3A-201ENST00000216211 IGKV2D-24A0A075B6R9 120 aa9.87□□□□□ -0.83
UPK3A-201ENST00000216211 LINC01546A6NGU7 62 aa9.87□□□□□ -0.83
UPK3A-201ENST00000216211 GAS8-AS1O95177 125 aa9.87□□□□□ -0.83
UPK3A-201ENST00000216211 IFI27P40305 119 aaPredicted RBP9.87□□□□□ -0.83
UPK3A-201ENST00000216211 LINC01620Q4KN68 170 aa9.87□□□□□ -0.83
UPK3A-201ENST00000216211 Q6ZSA8 131 aa9.87□□□□□ -0.83
UPK3A-201ENST00000216211 FA2HQ7L5A8 372 aa9.87□□□□□ -0.83
UPK3A-201ENST00000216211 FAM19A2Q8N3H0 131 aa9.87□□□□□ -0.83
UPK3A-201ENST00000216211 NRACQ8N912 160 aa9.87□□□□□ -0.83
UPK3A-201ENST00000216211 RMI2Q96E14 147 aa9.87□□□□□ -0.83
UPK3A-201ENST00000216211 COX11Q9Y6N1 276 aa9.87□□□□□ -0.83
UPK3A-201ENST00000216211 SMIM17P0DL12 118 aa9.86□□□□□ -0.83
UPK3A-201ENST00000216211 RPL36AP83881 106 aaKnown RBP9.86□□□□□ -0.83
UPK3A-201ENST00000216211 RPL36ALQ969Q0 106 aaKnown RBP9.86□□□□□ -0.83
UPK3A-201ENST00000216211 AP5S1Q9NUS5 200 aa9.86□□□□□ -0.83
UPK3A-201ENST00000216211 A0A087WX48 190 aa9.85□□□□□ -0.83
UPK3A-201ENST00000216211 IGHV1-24A0A0C4DH33 117 aa9.85□□□□□ -0.83
UPK3A-201ENST00000216211 TRBV10-1A0A0K0K1A3 114 aa9.85□□□□□ -0.83
UPK3A-201ENST00000216211 LOC389332A0A1B0GUA5 103 aa9.85□□□□□ -0.83
UPK3A-201ENST00000216211 PPP1R17O96001 155 aa9.85□□□□□ -0.83
UPK3A-201ENST00000216211 UBE2D3P61077 147 aa9.85□□□□□ -0.83
UPK3A-201ENST00000216211 UBE2D2P62837 147 aa9.85□□□□□ -0.83
UPK3A-201ENST00000216211 LINC00528Q8N1L1 170 aa9.85□□□□□ -0.83
UPK3A-201ENST00000216211 UBE2WQ96B02 151 aa9.85□□□□□ -0.83
UPK3A-201ENST00000216211 NXT2Q9NPJ8 142 aaKnown RBP9.85□□□□□ -0.83
UPK3A-201ENST00000216211 TRBV7-3A0A075B6L6 115 aa9.84□□□□□ -0.83
UPK3A-201ENST00000216211 MGPP08493 103 aa9.84□□□□□ -0.83
UPK3A-201ENST00000216211 Q8N8P6 123 aa9.84□□□□□ -0.83
UPK3A-201ENST00000216211 Q8N976 141 aa9.84□□□□□ -0.83
UPK3A-201ENST00000216211 C20orf78Q9BR46 151 aa9.84□□□□□ -0.83
UPK3A-201ENST00000216211 CHCHD7Q9BUK0 85 aa9.84□□□□□ -0.83
UPK3A-201ENST00000216211 TRAV26-2A0A0B4J265 109 aa9.83□□□□□ -0.84
UPK3A-201ENST00000216211 PLA2G1BP04054 148 aaKnown RBP9.83□□□□□ -0.84
UPK3A-201ENST00000216211 ZNF56Q15929 161 aa9.83□□□□□ -0.84
UPK3A-201ENST00000216211 SCXQ7RTU7 201 aa9.82□□□□□ -0.84
UPK3A-201ENST00000216211 NEXN-AS1Q8NBZ9 246 aa9.82□□□□□ -0.84
UPK3A-201ENST00000216211 NIT2Q9NQR4 276 aa9.82□□□□□ -0.84
UPK3A-201ENST00000216211 PKHD1L1Q86WI1 4243 aa9.82□□□□□ -0.84
UPK3A-201ENST00000216211 TMEM262E9PQX1 116 aa9.81□□□□□ -0.84
UPK3A-201ENST00000216211 J3QL48 77 aa9.81□□□□□ -0.84
UPK3A-201ENST00000216211 LEPROTL1O95214 131 aa9.81□□□□□ -0.84
UPK3A-201ENST00000216211 C3orf79P0CE67 100 aa9.81□□□□□ -0.84
UPK3A-201ENST00000216211 RPL32P62910 135 aaKnown RBP9.81□□□□□ -0.84
UPK3A-201ENST00000216211 PMCHL1Q16048 86 aa9.81□□□□□ -0.84
UPK3A-201ENST00000216211 SUMO4Q6EEV6 95 aa9.81□□□□□ -0.84
UPK3A-201ENST00000216211 A0A096LNJ9 63 aa9.8□□□□□ -0.84
UPK3A-201ENST00000216211 TRBV6-8A0A0A6YYG3 113 aa9.8□□□□□ -0.84
UPK3A-201ENST00000216211 SCGB1D1O95968 90 aa9.8□□□□□ -0.84
UPK3A-201ENST00000216211 KRTDAPP60985 99 aa9.8□□□□□ -0.84
UPK3A-201ENST00000216211 SUMO2P61956 95 aaKnown RBP9.8□□□□□ -0.84
UPK3A-201ENST00000216211 ENHOQ6UWT2 76 aa9.8□□□□□ -0.84
UPK3A-201ENST00000216211 SMIM2Q9BVW6 85 aa9.8□□□□□ -0.84
UPK3A-201ENST00000216211 HSPB8Q9UJY1 196 aa9.8□□□□□ -0.84
UPK3A-201ENST00000216211 TRBV6-5A0A0K0K1A5 114 aa9.79□□□□□ -0.84
UPK3A-201ENST00000216211 F5H697 171 aa9.79□□□□□ -0.84
UPK3A-201ENST00000216211 K7EMI3 77 aa9.79□□□□□ -0.84
UPK3A-201ENST00000216211 FCER1GP30273 86 aa9.79□□□□□ -0.84
UPK3A-201ENST00000216211 MPV17L2Q567V2 206 aa9.79□□□□□ -0.84
UPK3A-201ENST00000216211 RPL39LQ96EH5 51 aaKnown RBP9.79□□□□□ -0.84
UPK3A-201ENST00000216211 C1orf43Q9BWL3 253 aa9.79□□□□□ -0.84
UPK3A-201ENST00000216211 M0QY20 66 aa9.78□□□□□ -0.84
UPK3A-201ENST00000216211 HBDP02042 147 aa9.78□□□□□ -0.84
UPK3A-201ENST00000216211 CRPP02741 224 aa9.78□□□□□ -0.84
UPK3A-201ENST00000216211 ST20Q9HBF5 79 aa9.78□□□□□ -0.84
UPK3A-201ENST00000216211 FAT3Q8TDW7 4589 aa9.77□□□□□ -0.85
UPK3A-201ENST00000216211 ANGP03950 147 aaKnown RBP9.77□□□□□ -0.85
UPK3A-201ENST00000216211 POLR2KP53803 58 aaKnown RBP9.77□□□□□ -0.85
UPK3A-201ENST00000216211 LINC00173Q6ZV60 143 aa9.77□□□□□ -0.85
UPK3A-201ENST00000216211 CHCHD5Q9BSY4 110 aa9.77□□□□□ -0.85
UPK3A-201ENST00000216211 CHAC1Q9BUX1 264 aa9.77□□□□□ -0.85
UPK3A-201ENST00000216211 LRP1Q07954 4544 aaKnown RBP9.76□□□□□ -0.85
UPK3A-201ENST00000216211 H7C1H1 209 aa9.76□□□□□ -0.85
UPK3A-201ENST00000216211 TEX43Q6ZNM6 134 aa9.76□□□□□ -0.85
UPK3A-201ENST00000216211 NTM-AS1Q6ZSK4 140 aa9.76□□□□□ -0.85
UPK3A-201ENST00000216211 CIRBP-AS1Q8TBR5 109 aa9.76□□□□□ -0.85
UPK3A-201ENST00000216211 DEFB104AQ8WTQ1 72 aa9.76□□□□□ -0.85
UPK3A-201ENST00000216211 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
UPK3A-201ENST00000216211 KRTAP29-1A8MX34 341 aaPredicted RBP9.75□□□□□ -0.85
UPK3A-201ENST00000216211 SYS1-DBNDD2H3BUS1 97 aa9.75□□□□□ -0.85
UPK3A-201ENST00000216211 VCYO14598 125 aa9.75□□□□□ -0.85
UPK3A-201ENST00000216211 S100A12P80511 92 aa9.75□□□□□ -0.85
UPK3A-201ENST00000216211 C14orf177Q52M58 125 aa9.75□□□□□ -0.85
UPK3A-201ENST00000216211 PET117Q6UWS5 81 aa9.75□□□□□ -0.85
UPK3A-201ENST00000216211 KRTAP10-4P60372 401 aaPredicted RBP9.74□□□□□ -0.85
UPK3A-201ENST00000216211 ORMDL2Q53FV1 153 aa9.74□□□□□ -0.85
UPK3A-201ENST00000216211 TRBV27A0A0K0K1C4 114 aa9.73□□□□□ -0.85
UPK3A-201ENST00000216211 USP17L23D6RBM5 183 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms