RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 PKIGQ9Y2B9 76 aa12.23□□□□□ -0.45
SYNGR1-201ENST00000216155 GATCO43716 136 aaKnown RBP12.21□□□□□ -0.45
SYNGR1-201ENST00000216155 KRTAP10-8P60410 259 aa12.21□□□□□ -0.45
SYNGR1-201ENST00000216155 MRAP2Q96G30 205 aa12.21□□□□□ -0.45
SYNGR1-201ENST00000216155 REG3GQ6UW15 175 aa12.2□□□□□ -0.46
SYNGR1-201ENST00000216155 FAM231DQ6ZW35 169 aa12.2□□□□□ -0.46
SYNGR1-201ENST00000216155 A8MWL6 223 aa12.19□□□□□ -0.46
SYNGR1-201ENST00000216155 SRSF9Q13242 221 aaKnown RBP eCLIP12.19□□□□□ -0.46
SYNGR1-201ENST00000216155 SS18Q15532 418 aa12.19□□□□□ -0.46
SYNGR1-201ENST00000216155 CD164L2Q6UWJ8 174 aa12.19□□□□□ -0.46
SYNGR1-201ENST00000216155 ALKAL2Q6UX46 152 aa12.19□□□□□ -0.46
SYNGR1-201ENST00000216155 Q6ZRP5 223 aa12.19□□□□□ -0.46
SYNGR1-201ENST00000216155 MRPL52Q86TS9 123 aaKnown RBP12.19□□□□□ -0.46
SYNGR1-201ENST00000216155 ST20Q9HBF5 79 aa12.19□□□□□ -0.46
SYNGR1-201ENST00000216155 CDC42SE2Q9NRR3 84 aa12.19□□□□□ -0.46
SYNGR1-201ENST00000216155 SYCNQ0VAF6 134 aa12.18□□□□□ -0.46
SYNGR1-201ENST00000216155 CT83Q5H943 113 aa12.18□□□□□ -0.46
SYNGR1-201ENST00000216155 TMEM250H0YL14 139 aa12.17□□□□□ -0.46
SYNGR1-201ENST00000216155 ZNF561-AS1K7EIQ3 104 aa12.17□□□□□ -0.46
SYNGR1-201ENST00000216155 CAMPP49913 170 aa12.17□□□□□ -0.46
SYNGR1-201ENST00000216155 PTTG1IPP53801 180 aa12.17□□□□□ -0.46
SYNGR1-201ENST00000216155 C7orf77A4D0Y5 90 aa12.16□□□□□ -0.46
SYNGR1-201ENST00000216155 POLR2KP53803 58 aaKnown RBP12.16□□□□□ -0.46
SYNGR1-201ENST00000216155 BLOC1S1P78537 153 aa12.16□□□□□ -0.46
SYNGR1-201ENST00000216155 ZNF664Q8N3J9 261 aa12.16□□□□□ -0.46
SYNGR1-201ENST00000216155 FAM210AQ96ND0 272 aa12.16□□□□□ -0.46
SYNGR1-201ENST00000216155 TRBV27A0A0K0K1C4 114 aa12.15□□□□□ -0.46
SYNGR1-201ENST00000216155 BORCS7Q96B45 105 aa12.15□□□□□ -0.46
SYNGR1-201ENST00000216155 TMEM191AQ9H0A3 160 aa12.15□□□□□ -0.46
SYNGR1-201ENST00000216155 IGLV4-69A0A075B6H9 119 aa12.14□□□□□ -0.47
SYNGR1-201ENST00000216155 GAGE2BQ13066 116 aa12.14□□□□□ -0.47
SYNGR1-201ENST00000216155 LPAP08519 4548 aa12.13□□□□□ -0.47
SYNGR1-201ENST00000216155 LOC107984640A0A0U1RRK4 108 aa12.13□□□□□ -0.47
SYNGR1-201ENST00000216155 A0A1B0GUT8 65 aa12.13□□□□□ -0.47
SYNGR1-201ENST00000216155 HIGD1CA8MV81 97 aa12.13□□□□□ -0.47
SYNGR1-201ENST00000216155 RAB4AP20338 218 aa12.13□□□□□ -0.47
SYNGR1-201ENST00000216155 AMN1Q8IY45 258 aa12.13□□□□□ -0.47
SYNGR1-201ENST00000216155 ISOC2Q96AB3 205 aa12.13□□□□□ -0.47
SYNGR1-201ENST00000216155 A0A1W2PNN7 141 aa12.12□□□□□ -0.47
SYNGR1-201ENST00000216155 CEBPGP53567 150 aa12.12□□□□□ -0.47
SYNGR1-201ENST00000216155 NUP35Q8NFH5 326 aa12.12□□□□□ -0.47
SYNGR1-201ENST00000216155 TSKUQ8WUA8 353 aa12.12□□□□□ -0.47
SYNGR1-201ENST00000216155 COX7A2LO14548 114 aa12.11□□□□□ -0.47
SYNGR1-201ENST00000216155 MALP21145 153 aa12.11□□□□□ -0.47
SYNGR1-201ENST00000216155 C1orf196B1AJZ1 125 aa12.1□□□□□ -0.47
SYNGR1-201ENST00000216155 SMKR1H3BMG3 65 aa12.1□□□□□ -0.47
SYNGR1-201ENST00000216155 RNASE13Q5GAN3 156 aaKnown RBP12.1□□□□□ -0.47
SYNGR1-201ENST00000216155 LINC01551Q86U37 167 aa12.1□□□□□ -0.47
SYNGR1-201ENST00000216155 UBE2D4Q9Y2X8 147 aa12.1□□□□□ -0.47
SYNGR1-201ENST00000216155 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.09□□□□□ -0.47
SYNGR1-201ENST00000216155 APOMO95445 188 aa12.09□□□□□ -0.47
SYNGR1-201ENST00000216155 CAMK2N2Q96S95 79 aa12.09□□□□□ -0.47
SYNGR1-201ENST00000216155 CSDC2Q9Y534 153 aaKnown RBP12.09□□□□□ -0.47
SYNGR1-201ENST00000216155 FCER1GP30273 86 aa12.08□□□□□ -0.48
SYNGR1-201ENST00000216155 C9orf116Q5BN46 136 aaPredicted RBP12.08□□□□□ -0.48
SYNGR1-201ENST00000216155 NRACQ8N912 160 aa12.08□□□□□ -0.48
SYNGR1-201ENST00000216155 SMIM7Q9BQ49 75 aa12.08□□□□□ -0.48
SYNGR1-201ENST00000216155 PSORS1C2Q9UIG4 136 aa12.08□□□□□ -0.48
SYNGR1-201ENST00000216155 TRAV13-1A0A0B4J241 112 aa12.07□□□□□ -0.48
SYNGR1-201ENST00000216155 VCYO14598 125 aa12.07□□□□□ -0.48
SYNGR1-201ENST00000216155 Q6ZUT4 128 aa12.07□□□□□ -0.48
SYNGR1-201ENST00000216155 SUMO2P61956 95 aaKnown RBP12.06□□□□□ -0.48
SYNGR1-201ENST00000216155 C2orf48Q96LS8 159 aa12.06□□□□□ -0.48
SYNGR1-201ENST00000216155 EIF5A2Q9GZV4 153 aaKnown RBP12.06□□□□□ -0.48
SYNGR1-201ENST00000216155 OSTCQ9NRP0 149 aa12.06□□□□□ -0.48
SYNGR1-201ENST00000216155 A0A1B0GVG6 124 aa12.05□□□□□ -0.48
SYNGR1-201ENST00000216155 RPL18AQ02543 176 aaKnown RBP12.05□□□□□ -0.48
SYNGR1-201ENST00000216155 C5orf38Q86SI9 138 aa12.05□□□□□ -0.48
SYNGR1-201ENST00000216155 MT-ND6P03923 174 aa12.04□□□□□ -0.48
SYNGR1-201ENST00000216155 SPAG11BQ08648 103 aa12.04□□□□□ -0.48
SYNGR1-201ENST00000216155 SMAGPQ0VAQ4 97 aa12.04□□□□□ -0.48
SYNGR1-201ENST00000216155 PHF5AQ7RTV0 110 aaKnown RBP12.04□□□□□ -0.48
SYNGR1-201ENST00000216155 KIR2DL4Q99706 377 aa12.04□□□□□ -0.48
SYNGR1-201ENST00000216155 V9GYV3 84 aa12.04□□□□□ -0.48
SYNGR1-201ENST00000216155 ZNF727A8MUV8 499 aa12.03□□□□□ -0.48
SYNGR1-201ENST00000216155 PPP1R17O96001 155 aa12.03□□□□□ -0.48
SYNGR1-201ENST00000216155 RIGQ13278 110 aa12.03□□□□□ -0.48
SYNGR1-201ENST00000216155 OPRPNQ99935 248 aaPredicted RBP12.03□□□□□ -0.48
SYNGR1-201ENST00000216155 C1orf137Q5JT78 98 aa12.02□□□□□ -0.49
SYNGR1-201ENST00000216155 PPP1R2P9O14990 202 aa12.01□□□□□ -0.49
SYNGR1-201ENST00000216155 TIMM21Q9BVV7 248 aa12.01□□□□□ -0.49
SYNGR1-201ENST00000216155 SRP19P09132 144 aaKnown RBP12□□□□□ -0.49
SYNGR1-201ENST00000216155 RNF151Q2KHN1 245 aa11.99□□□□□ -0.49
SYNGR1-201ENST00000216155 MRPL51Q4U2R6 128 aaKnown RBP11.99□□□□□ -0.49
SYNGR1-201ENST00000216155 OR10D4PQ8NGN7 298 aa11.99□□□□□ -0.49
SYNGR1-201ENST00000216155 TMEM18Q96B42 140 aa11.99□□□□□ -0.49
SYNGR1-201ENST00000216155 FAM104BQ5XKR9 115 aa11.98□□□□□ -0.49
SYNGR1-201ENST00000216155 FAM104AQ969W3 186 aa11.98□□□□□ -0.49
SYNGR1-201ENST00000216155 MRPL35Q9NZE8 188 aaKnown RBP11.98□□□□□ -0.49
SYNGR1-201ENST00000216155 NAT8BQ9UHF3 227 aa11.98□□□□□ -0.49
SYNGR1-201ENST00000216155 RPL39P62891 51 aaKnown RBP11.97□□□□□ -0.49
SYNGR1-201ENST00000216155 ORAOV1Q8WV07 137 aa11.97□□□□□ -0.49
SYNGR1-201ENST00000216155 IGHV3OR16-9A0A0B4J2B5 98 aa11.96□□□□□ -0.49
SYNGR1-201ENST00000216155 IGLV7-43P04211 117 aa11.96□□□□□ -0.49
SYNGR1-201ENST00000216155 C20orf78Q9BR46 151 aa11.96□□□□□ -0.49
SYNGR1-201ENST00000216155 TRBV24-1A0A075B6N3 115 aa11.95□□□□□ -0.5
SYNGR1-201ENST00000216155 FAM168BA1KXE4 195 aa11.95□□□□□ -0.5
SYNGR1-201ENST00000216155 RPL32P62910 135 aaKnown RBP11.95□□□□□ -0.5
SYNGR1-201ENST00000216155 C10orf25Q5T742 122 aa11.95□□□□□ -0.5
SYNGR1-201ENST00000216155 KRTAP11-1Q8IUC1 163 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 1420.1 ms