RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 CDKN2A-AS1Q9UH64 79 aa4.25□□□□□ -1.73
CEACAM1-201ENST00000161559 GAGE12JA6NER3 117 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 GAGE7O76087 117 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 GAGE12FP0CL80 117 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 GAGE12GP0CL81 117 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 GAGE12IP0CL82 117 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 MED14OSP0DP75 135 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 RPL32P62910 135 aaKnown RBP4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 CFHR3Q02985 330 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 GAGE4Q13068 117 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 CITED2Q99967 270 aaPredicted RBP4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 TNFRSF18Q9Y5U5 241 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 A0A0J9YX75 114 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 TRBV6-5A0A0K0K1A5 114 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 DEFB113Q30KQ7 82 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 IGHV1OR15-1A0A075B7D0 117 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 TRBV7-9A0A0J9YWB2 115 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 TMEM262E9PQX1 116 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 PPP1R17O96001 155 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 Q96MF0 132 aa4.24□□□□□ -1.73
CEACAM1-201ENST00000161559 TRBV30A0A0K0K1B3 111 aa4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 RBMY1BA6NDE4 496 aaKnown RBP4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 RBMY1EA6NEQ0 496 aaKnown RBP4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 IGHV4-59P01825 116 aa4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 RBMY1DP0C7P1 496 aaKnown RBP4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 MEIG1Q5JSS6 88 aa4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 SOSTDC1Q6X4U4 206 aa4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 VSIG2Q96IQ7 327 aa4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 KLK5Q9Y337 293 aaPredicted RBP4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 F8P00451 2351 aa4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 TRGV11A0A075B6L2 103 aa4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 LINC00694P0DN24 101 aa4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 HOXD3P31249 432 aaPredicted RBP4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 C9orf129Q5T035 196 aaKnown RBP4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 TMEM61Q8N0U2 210 aa4.23□□□□□ -1.73
CEACAM1-201ENST00000161559 IGHV4-30-2A0A087WSY4 118 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 IGHV1-58A0A0C4DH39 117 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 IGLV1-40P01703 118 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 MRPS36P82909 103 aaKnown RBP4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 FAM218AQ96MZ4 157 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 CHCHD7Q9BUK0 85 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 VWFP04275 2813 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 B4DSR2 109 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 WIPF1O43516 503 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 MIAQ16674 131 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 LINC00528Q8N1L1 170 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 UBE2D4Q9Y2X8 147 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 FAM236AA0A1B0GUQ0 79 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 FAM236BA0A1B0GV22 79 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 A6NDX4 124 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 PIK3CD-AS1Q5SR53 167 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 Q9HAA7 133 aa4.22□□□□□ -1.73
CEACAM1-201ENST00000161559 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.21□□□□□ -1.73
CEACAM1-201ENST00000161559 LST1O00453 97 aa4.21□□□□□ -1.73
CEACAM1-201ENST00000161559 RHOHQ15669 191 aa4.21□□□□□ -1.73
CEACAM1-201ENST00000161559 TMEM101Q96IK0 257 aa4.21□□□□□ -1.73
CEACAM1-201ENST00000161559 CYSTM1Q9H1C7 97 aa4.21□□□□□ -1.73
CEACAM1-201ENST00000161559 C22orf24Q9Y442 160 aa4.21□□□□□ -1.73
CEACAM1-201ENST00000161559 PPDPFQ9H3Y8 114 aa4.21□□□□□ -1.74
CEACAM1-201ENST00000161559 IGHV3OR16-12A0A075B7B8 117 aa4.21□□□□□ -1.74
CEACAM1-201ENST00000161559 K7EQG2 157 aa4.21□□□□□ -1.74
CEACAM1-201ENST00000161559 IGHV3-53P01767 116 aa4.21□□□□□ -1.74
CEACAM1-201ENST00000161559 SLURP1P55000 103 aa4.21□□□□□ -1.74
CEACAM1-201ENST00000161559 USMG5Q96IX5 58 aa4.21□□□□□ -1.74
CEACAM1-201ENST00000161559 Q9H8V8 135 aa4.21□□□□□ -1.74
CEACAM1-201ENST00000161559 TRAV13-1A0A0B4J241 112 aa4.2□□□□□ -1.74
CEACAM1-201ENST00000161559 LOC107984640A0A0U1RRK4 108 aa4.2□□□□□ -1.74
CEACAM1-201ENST00000161559 PSMB8P28062 276 aa4.2□□□□□ -1.74
CEACAM1-201ENST00000161559 ID1P41134 155 aa4.2□□□□□ -1.74
CEACAM1-201ENST00000161559 DEFB131AP59861 70 aa4.2□□□□□ -1.74
CEACAM1-201ENST00000161559 UNC79Q9P2D8 2635 aa4.2□□□□□ -1.74
CEACAM1-201ENST00000161559 SNRPD3P62318 126 aaKnown RBP4.2□□□□□ -1.74
CEACAM1-201ENST00000161559 LINC01587Q99440 93 aa4.2□□□□□ -1.74
CEACAM1-201ENST00000161559 DAZ2Q13117 558 aaKnown RBP4.19□□□□□ -1.74
CEACAM1-201ENST00000161559 MRPL23Q16540 153 aaKnown RBP4.19□□□□□ -1.74
CEACAM1-201ENST00000161559 DEFB112Q30KQ8 113 aa4.19□□□□□ -1.74
CEACAM1-201ENST00000161559 DAZ4Q86SG3 579 aaKnown RBP4.19□□□□□ -1.74
CEACAM1-201ENST00000161559 LINC01356Q8N9X3 169 aa4.19□□□□□ -1.74
CEACAM1-201ENST00000161559 LINC00308Q8TCZ7 52 aa4.19□□□□□ -1.74
CEACAM1-201ENST00000161559 SPANXDQ9BXN6 97 aa4.19□□□□□ -1.74
CEACAM1-201ENST00000161559 DAZ3Q9NR90 486 aaKnown RBP4.19□□□□□ -1.74
CEACAM1-201ENST00000161559 SPANXCQ9NY87 97 aa4.19□□□□□ -1.74
CEACAM1-201ENST00000161559 IGKV3OR2-268A0A0C4DH90 116 aa4.19□□□□□ -1.74
CEACAM1-201ENST00000161559 MAST4O15021 2626 aa4.19□□□□□ -1.74
CEACAM1-201ENST00000161559 M0QXV9 152 aa4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 MSMBP08118 114 aa4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 KRTAP10-9P60411 292 aa4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 KHDC1LQ5JSQ8 128 aa4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 ITPR3Q14573 2671 aa4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 TINCRA0A1B0GVN0 87 aa4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 LINC00242Q5T6M2 205 aa4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 UBE2E2Q96LR5 201 aa4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 C11orf44Q8N8P7 122 aa4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 XCL2Q9UBD3 114 aa4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 CR1P17927 2039 aa4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 TEP1Q99973 2627 aaKnown RBP4.18□□□□□ -1.74
CEACAM1-201ENST00000161559 COX6CP09669 75 aa4.17□□□□□ -1.74
CEACAM1-201ENST00000161559 LRRC75A-AS1Q8N1F1 130 aa4.17□□□□□ -1.74
CEACAM1-201ENST00000161559 WFDC11Q8NEX6 87 aa4.17□□□□□ -1.74
CEACAM1-201ENST00000161559 C10orf105Q8TEF2 133 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms