RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	TRE1	Q08919	783 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	PCD1	Q12524	340 aa		4.8	□□□□□ -1.64
SSB2	YNL209W	LAA1	P39526	2014 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	MOT1	P32333	1867 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	HEM1	P09950	548 aa	Predicted RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	RPB4	P20433	221 aa	Predicted RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	CDC10	P25342	322 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	LRE1	P25579	583 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	KAR4	P25583	335 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	CDC20	P26309	610 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	RPT1	P33299	467 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	SQT1	P35184	431 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	DRE2	P36152	348 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	NOP4	P37838	685 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	YBR032W	P38223	100 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	HSL7	P38274	827 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	SIP5	P40210	489 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	IRR1	P40541	1150 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	TEP1	P53916	434 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	NOP15	P53927	220 aa	Predicted RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	CUS1	Q02554	436 aa	Predicted RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	YMR160W	Q03823	816 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	RKM2	Q03942	479 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	SXM1	Q04175	944 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	ADE13	Q05911	482 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	TAF10	Q12030	206 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	CIT2	P08679	460 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	STE6	P12866	1290 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	PMR1	P13586	950 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	PUT4	P15380	627 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	SEN2	P16658	377 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	HNM1	P19807	563 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	ADE2	P21264	571 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	OCA4	P25366	362 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	PDB1	P32473	366 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	KAR9	P32526	644 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	FRE1	P32791	686 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	TIM23	P32897	222 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	HEL1	P36113	551 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
SSB2	YNL209W	UBP14	P38237	781 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	MSR1	P38714	643 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	YTA6	P40328	754 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	MAF1	P41910	395 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	EMW1	P42842	904 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	PFD1	P46988	109 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	YGR283C	P53336	341 aa	Predicted RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	SLG1	P54867	378 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	YPL109C	Q02981	657 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	RPN4	Q03465	531 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	BUD22	Q04347	519 aa	Known RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	RNH1	Q04740	348 aa		4.79	□□□□□ -1.64
SSB2	YNL209W	RRP36	Q12481	300 aa	Predicted RBP	4.79	□□□□□ -1.64
SSB2	YNL209W	SSC1	P0CS90	654 aa	Known RBP	4.78	□□□□□ -1.64
SSB2	YNL209W	SNA3	P14359	133 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	URA7	P28274	579 aa	Known RBP	4.78	□□□□□ -1.64
SSB2	YNL209W	MLS1	P30952	554 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	PTR2	P32901	601 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	CSE2	P33308	149 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	SEC66	P33754	206 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	YMC2	P38087	329 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	UBX7	P38349	436 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	OTU2	P38747	307 aa	Known RBP	4.78	□□□□□ -1.64
SSB2	YNL209W	SPC97	P38863	823 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	SCC4	P40090	624 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	GCD14	P46959	383 aa	Predicted RBP	4.78	□□□□□ -1.64
SSB2	YNL209W	TAH11	P47112	604 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	HLJ1	P48353	224 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	ORM1	P53224	222 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	DCP2	P53550	970 aa	Known RBP	4.78	□□□□□ -1.64
SSB2	YNL209W	BIO4	P53630	237 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	KTR5	P53966	522 aa	Predicted RBP	4.78	□□□□□ -1.64
SSB2	YNL209W	INP2	Q03824	705 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	NNT1	Q05874	261 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	NOB1	Q08444	459 aa	Known RBP	4.78	□□□□□ -1.64
SSB2	YNL209W	THI21	Q08975	551 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	YLR053C	Q12026	108 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	YOR022C	Q12204	715 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	MAM3	Q12296	706 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	RTP1	Q12751	981 aa		4.78	□□□□□ -1.64
SSB2	YNL209W	ILS1	P09436	1072 aa	Known RBP	4.77	□□□□□ -1.65
SSB2	YNL209W	AAD3	P25612	363 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	AIM26	P32858	118 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	DUR3	P33413	735 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	NUP120	P35729	1037 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	ETR1	P38071	380 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	RIM4	P38741	713 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	LIN1	P38852	340 aa	Predicted RBP	4.77	□□□□□ -1.65
SSB2	YNL209W	CKB2	P38930	258 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	TVP23	P38962	199 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	AFG3	P39925	761 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	DSE1	P40077	573 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	PFK26	P40433	827 aa	Known RBP	4.77	□□□□□ -1.65
SSB2	YNL209W	GCD10	P41814	478 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	YFL012W	P43580	148 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	IML2	P47031	731 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	PRY3	P47033	881 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	TIM54	P47045	478 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	YJR107W	P47145	328 aa		4.77	□□□□□ -1.65
SSB2	YNL209W	ECL1	P48235	211 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 88.5 ms