RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W SRP40P32583 406 aaPredicted RBP3.59□□□□□ -1.83
NSP1YJL041W MYO3P36006 1272 aa3.59□□□□□ -1.83
NSP1YJL041W BAP2P38084 609 aa3.59□□□□□ -1.83
NSP1YJL041W MCX1P38323 520 aaPredicted RBP3.59□□□□□ -1.83
NSP1YJL041W SSB2P40150 613 aaKnown RBP3.59□□□□□ -1.83
NSP1YJL041W YJR061WP40355 935 aa3.59□□□□□ -1.83
NSP1YJL041W FAF1P40546 346 aaPredicted RBP3.59□□□□□ -1.83
NSP1YJL041W RLP7P40693 322 aaKnown RBP3.59□□□□□ -1.83
NSP1YJL041W DAS1P47005 663 aa3.59□□□□□ -1.83
NSP1YJL041W COX16P47081 118 aa3.59□□□□□ -1.83
NSP1YJL041W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
NSP1YJL041W ABZ2Q03266 374 aa3.59□□□□□ -1.83
NSP1YJL041W CLU1Q03690 1277 aaKnown RBP3.59□□□□□ -1.83
NSP1YJL041W YDR131CQ03899 556 aa3.59□□□□□ -1.83
NSP1YJL041W VAC14Q06708 880 aa3.59□□□□□ -1.83
NSP1YJL041W CDC53Q12018 815 aaKnown RBP3.59□□□□□ -1.83
NSP1YJL041W TAH18Q12181 623 aa3.59□□□□□ -1.83
NSP1YJL041W ATG34Q12292 412 aa3.59□□□□□ -1.83
NSP1YJL041W NTO1Q12311 748 aa3.59□□□□□ -1.83
NSP1YJL041W RRI2Q12348 645 aa3.59□□□□□ -1.83
NSP1YJL041W RMP1Q12530 201 aa3.59□□□□□ -1.83
NSP1YJL041W VTH2P40890 1549 aa3.59□□□□□ -1.84
NSP1YJL041W ILS1P09436 1072 aaKnown RBP3.59□□□□□ -1.84
NSP1YJL041W FUS1P11710 512 aa3.59□□□□□ -1.84
NSP1YJL041W CDC23P16522 626 aa3.59□□□□□ -1.84
NSP1YJL041W PHO13P19881 312 aa3.59□□□□□ -1.84
NSP1YJL041W DBP5P20449 482 aaKnown RBP3.59□□□□□ -1.84
NSP1YJL041W MCM5P29496 775 aaKnown RBP3.59□□□□□ -1.84
NSP1YJL041W SSE2P32590 693 aaKnown RBP3.59□□□□□ -1.84
NSP1YJL041W ABZ1P37254 787 aaPredicted RBP3.59□□□□□ -1.84
NSP1YJL041W SEA4P38164 1038 aa3.59□□□□□ -1.84
NSP1YJL041W RFS1P38234 210 aaKnown RBP3.59□□□□□ -1.84
NSP1YJL041W MPT5P39016 859 aaKnown RBP RIP-Chip data3.59□□□□□ -1.84not detected
NSP1YJL041W AIM24P47127 394 aa3.59□□□□□ -1.84
NSP1YJL041W ABM1P47146 123 aa3.59□□□□□ -1.84
NSP1YJL041W SRB7P47822 140 aa3.59□□□□□ -1.84
NSP1YJL041W YPT32P51996 222 aaKnown RBP3.59□□□□□ -1.84
NSP1YJL041W PRO2P54885 456 aaKnown RBP3.59□□□□□ -1.84
NSP1YJL041W FCP1Q03254 732 aa3.59□□□□□ -1.84
NSP1YJL041W FIN1Q03898 291 aa3.59□□□□□ -1.84
NSP1YJL041W BDF2Q07442 638 aa3.59□□□□□ -1.84
NSP1YJL041W SOG2Q08817 791 aa3.59□□□□□ -1.84
NSP1YJL041W AKR2Q12013 749 aa3.59□□□□□ -1.84
NSP1YJL041W SSF2Q12153 453 aaPredicted RBP3.59□□□□□ -1.84
NSP1YJL041W LAG2Q92325 660 aa3.59□□□□□ -1.84
NSP1YJL041W LTE1P07866 1435 aa3.58□□□□□ -1.84
NSP1YJL041W JIP3O13555 125 aa3.58□□□□□ -1.84
NSP1YJL041W RPC40P07703 335 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W HOM3P10869 527 aa3.58□□□□□ -1.84
NSP1YJL041W THR1P17423 357 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W YCR051WP25631 222 aa3.58□□□□□ -1.84
NSP1YJL041W TPS2P31688 896 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W EFT1P32324 842 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W YKT6P36015 200 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W MRPL17P36528 281 aa3.58□□□□□ -1.84
NSP1YJL041W MRPL37P36532 105 aa3.58□□□□□ -1.84
NSP1YJL041W UGA2P38067 497 aa3.58□□□□□ -1.84
NSP1YJL041W DUG2P38149 878 aa3.58□□□□□ -1.84
NSP1YJL041W TOM22P49334 152 aa3.58□□□□□ -1.84
NSP1YJL041W PSP1P50896 841 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W PPT1P53043 513 aa3.58□□□□□ -1.84
NSP1YJL041W YTP1P53584 459 aa3.58□□□□□ -1.84
NSP1YJL041W YPL034WQ03083 165 aa3.58□□□□□ -1.84
NSP1YJL041W VPS38Q05919 439 aa3.58□□□□□ -1.84
NSP1YJL041W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
NSP1YJL041W NUP188P52593 1655 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W SPE2P21182 396 aa3.58□□□□□ -1.84
NSP1YJL041W ARG1P22768 420 aa3.58□□□□□ -1.84
NSP1YJL041W CHS3P29465 1165 aa3.58□□□□□ -1.84
NSP1YJL041W ACP1P32463 125 aa3.58□□□□□ -1.84
NSP1YJL041W PRP19P32523 503 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W CUE2P36075 443 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W YKL077WP36081 392 aa3.58□□□□□ -1.84
NSP1YJL041W ANR2P36090 516 aaPredicted RBP3.58□□□□□ -1.84
NSP1YJL041W TRM5P38793 499 aa3.58□□□□□ -1.84
NSP1YJL041W PES4P39684 611 aa3.58□□□□□ -1.84
NSP1YJL041W GEM1P39722 662 aa3.58□□□□□ -1.84
NSP1YJL041W AIM10P39965 576 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W ELP2P42935 788 aa3.58□□□□□ -1.84
NSP1YJL041W JJJ3P47138 172 aa3.58□□□□□ -1.84
NSP1YJL041W STB4P50104 949 aa3.58□□□□□ -1.84
NSP1YJL041W CUZ1P53899 274 aa3.58□□□□□ -1.84
NSP1YJL041W VAC7P53950 1165 aa3.58□□□□□ -1.84
NSP1YJL041W NOG1Q02892 647 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W GCN5Q03330 439 aa3.58□□□□□ -1.84
NSP1YJL041W YMR265CQ03508 461 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W DXO1Q06349 442 aa3.58□□□□□ -1.84
NSP1YJL041W VIP1Q06685 1146 aaKnown RBP3.58□□□□□ -1.84
NSP1YJL041W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
NSP1YJL041W YOL057WQ08225 711 aa3.58□□□□□ -1.84
NSP1YJL041W BAG7Q12128 409 aa3.58□□□□□ -1.84
NSP1YJL041W YPL150WQ12152 901 aa3.58□□□□□ -1.84
NSP1YJL041W RPL19AP0CX82 189 aaKnown RBP3.57□□□□□ -1.84
NSP1YJL041W RPL19BP0CX83 189 aaPredicted RBP3.57□□□□□ -1.84
NSP1YJL041W PUT4P15380 627 aa3.57□□□□□ -1.84
NSP1YJL041W CKI1P20485 582 aa3.57□□□□□ -1.84
NSP1YJL041W FPS1P23900 669 aa3.57□□□□□ -1.84
NSP1YJL041W PHO3P24031 467 aa3.57□□□□□ -1.84
NSP1YJL041W RAD57P25301 460 aa3.57□□□□□ -1.84
NSP1YJL041W OCA4P25366 362 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms