RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W ATG26Q06321 1198 aa7.18□□□□□ -1.26
NUP84YDL116W TMA46Q12000 345 aaKnown RBP7.18□□□□□ -1.26
NUP84YDL116W MDM20Q12387 796 aaKnown RBP7.18□□□□□ -1.26
NUP84YDL116W PTC1P35182 281 aa7.17□□□□□ -1.26
NUP84YDL116W TSC10P38342 320 aa7.17□□□□□ -1.26
NUP84YDL116W RRN7P40992 514 aa7.17□□□□□ -1.26
NUP84YDL116W GCN20P43535 752 aaKnown RBP7.17□□□□□ -1.26
NUP84YDL116W RSC8P43609 557 aaKnown RBP7.17□□□□□ -1.26
NUP84YDL116W ASN1P49089 572 aaKnown RBP7.17□□□□□ -1.26
NUP84YDL116W UBP15P50101 1230 aa7.17□□□□□ -1.26
NUP84YDL116W RPA14P50106 137 aa7.17□□□□□ -1.26
NUP84YDL116W NAN1Q02931 896 aaKnown RBP7.17□□□□□ -1.26
NUP84YDL116W ADI1Q03677 179 aa7.17□□□□□ -1.26
NUP84YDL116W YDR179W-AQ03983 463 aa7.17□□□□□ -1.26
NUP84YDL116W TSR2Q06672 205 aaKnown RBP7.17□□□□□ -1.26
NUP84YDL116W GPI13Q07830 1017 aa7.17□□□□□ -1.26
NUP84YDL116W RIF1P29539 1916 aa7.17□□□□□ -1.26
NUP84YDL116W CBP1P07252 654 aa7.16□□□□□ -1.26
NUP84YDL116W TRM1P15565 570 aaKnown RBP7.16□□□□□ -1.26
NUP84YDL116W ABD1P32783 436 aaPredicted RBP7.16□□□□□ -1.26
NUP84YDL116W HSP78P33416 811 aa7.16□□□□□ -1.26
NUP84YDL116W VID24P38263 362 aa7.16□□□□□ -1.26
NUP84YDL116W SEC31P38968 1273 aaKnown RBP7.16□□□□□ -1.26
NUP84YDL116W QDR1P40475 563 aa7.16□□□□□ -1.26
NUP84YDL116W RPL22BP56628 122 aaKnown RBP7.16□□□□□ -1.26
NUP84YDL116W YMR074CQ04773 145 aa7.16□□□□□ -1.26
NUP84YDL116W ORM2Q06144 216 aa7.16□□□□□ -1.26
NUP84YDL116W YLR455WQ06188 304 aa7.16□□□□□ -1.26
NUP84YDL116W HPR1P17629 752 aaKnown RBP7.16□□□□□ -1.26
NUP84YDL116W DPB2P24482 689 aaPredicted RBP7.16□□□□□ -1.26
NUP84YDL116W SCC4P40090 624 aa7.16□□□□□ -1.26
NUP84YDL116W STB4P50104 949 aa7.16□□□□□ -1.26
NUP84YDL116W MRK1P50873 501 aa7.16□□□□□ -1.26
NUP84YDL116W YNL146WP53906 100 aa7.16□□□□□ -1.26
NUP84YDL116W REH1Q06709 432 aa7.16□□□□□ -1.26
NUP84YDL116W ENT4Q07872 247 aa7.16□□□□□ -1.26
NUP84YDL116W THI20Q08224 551 aa7.16□□□□□ -1.26
NUP84YDL116W IES4Q08561 116 aa7.16□□□□□ -1.26
NUP84YDL116W CHS5Q12114 671 aaKnown RBP7.16□□□□□ -1.26
NUP84YDL116W AI4P03878 556 aa7.15□□□□□ -1.26
NUP84YDL116W FUR4P05316 633 aaKnown RBP7.15□□□□□ -1.26
NUP84YDL116W TCP1P12612 559 aaKnown RBP7.15□□□□□ -1.26
NUP84YDL116W TAL1P15019 335 aaKnown RBP7.15□□□□□ -1.26
NUP84YDL116W AIM26P32858 118 aa7.15□□□□□ -1.26
NUP84YDL116W YBL086CP38177 466 aa7.15□□□□□ -1.26
NUP84YDL116W SLI15P38283 698 aa7.15□□□□□ -1.26
NUP84YDL116W NMD3P38861 518 aaKnown RBP7.15□□□□□ -1.26
NUP84YDL116W FMP32P43557 207 aa7.15□□□□□ -1.26
NUP84YDL116W ROM1P53046 1155 aa7.15□□□□□ -1.26
NUP84YDL116W YTP1P53584 459 aa7.15□□□□□ -1.26
NUP84YDL116W ULP1Q02724 621 aa7.15□□□□□ -1.26
NUP84YDL116W SXM1Q04175 944 aaKnown RBP7.15□□□□□ -1.26
NUP84YDL116W TFB4Q12004 338 aa7.15□□□□□ -1.26
NUP84YDL116W STE2D6VTK4 431 aa7.15□□□□□ -1.27
NUP84YDL116W YPR089WO13585 888 aa7.15□□□□□ -1.27
NUP84YDL116W IDI1P15496 288 aa7.15□□□□□ -1.27
NUP84YDL116W PHO87P25360 923 aa7.15□□□□□ -1.27
NUP84YDL116W KIP2P28743 706 aa7.15□□□□□ -1.27
NUP84YDL116W ZIP1P31111 875 aa7.15□□□□□ -1.27
NUP84YDL116W TGL1P34163 548 aa7.15□□□□□ -1.27
NUP84YDL116W TGL3P40308 642 aa7.15□□□□□ -1.27
NUP84YDL116W ACF4P47129 309 aa7.15□□□□□ -1.27
NUP84YDL116W NCS6P53088 359 aa7.15□□□□□ -1.27
NUP84YDL116W LDB17Q12342 491 aa7.15□□□□□ -1.27
NUP84YDL116W DAL1P32375 460 aa7.14□□□□□ -1.27
NUP84YDL116W UTR2P32623 467 aa7.14□□□□□ -1.27
NUP84YDL116W FRT2P39734 528 aa7.14□□□□□ -1.27
NUP84YDL116W EAF5P39995 279 aa7.14□□□□□ -1.27
NUP84YDL116W GTT3P39996 337 aa7.14□□□□□ -1.27
NUP84YDL116W YIL054WP40524 105 aa7.14□□□□□ -1.27
NUP84YDL116W SHE10P53075 577 aa7.14□□□□□ -1.27
NUP84YDL116W MON1P53129 644 aa7.14□□□□□ -1.27
NUP84YDL116W PRO2P54885 456 aaKnown RBP7.14□□□□□ -1.27
NUP84YDL116W MCH5Q08777 521 aa7.14□□□□□ -1.27
NUP84YDL116W SLF1Q12034 447 aaKnown RBP7.14□□□□□ -1.27
NUP84YDL116W YMR030W-AQ3E760 96 aa7.14□□□□□ -1.27
NUP84YDL116W ADE3P07245 946 aaKnown RBP7.13□□□□□ -1.27
NUP84YDL116W ERG20P08524 352 aaKnown RBP7.13□□□□□ -1.27
NUP84YDL116W RPP1BP10622 106 aaKnown RBP7.13□□□□□ -1.27
NUP84YDL116W KEX2P13134 814 aa7.13□□□□□ -1.27
NUP84YDL116W ART10P18634 518 aaKnown RBP7.13□□□□□ -1.27
NUP84YDL116W PRP6P19735 899 aaPredicted RBP7.13□□□□□ -1.27
NUP84YDL116W KIN82P25341 720 aa7.13□□□□□ -1.27
NUP84YDL116W GID7P25569 745 aa7.13□□□□□ -1.27
NUP84YDL116W SPT16P32558 1035 aaKnown RBP7.13□□□□□ -1.27
NUP84YDL116W SPR1P32603 445 aa7.13□□□□□ -1.27
NUP84YDL116W HBS1P32769 611 aaKnown RBP7.13□□□□□ -1.27
NUP84YDL116W TIF3P34167 436 aaKnown RBP7.13□□□□□ -1.27
NUP84YDL116W AMN1P38285 549 aaPredicted RBP7.13□□□□□ -1.27
NUP84YDL116W TDP1P38319 544 aa7.13□□□□□ -1.27
NUP84YDL116W PRM2P40534 656 aa7.13□□□□□ -1.27
NUP84YDL116W SAE2P46946 345 aa7.13□□□□□ -1.27
NUP84YDL116W TIM11P81449 96 aaPredicted RBP7.13□□□□□ -1.27
NUP84YDL116W CSN9Q03981 162 aa7.13□□□□□ -1.27
NUP84YDL116W YLL058WQ12198 575 aa7.13□□□□□ -1.27
NUP84YDL116W VCX1Q99385 411 aa7.13□□□□□ -1.27
NUP84YDL116W URA4P20051 364 aa7.13□□□□□ -1.27
NUP84YDL116W SEC1P30619 724 aaKnown RBP7.13□□□□□ -1.27
NUP84YDL116W FRE1P32791 686 aa7.13□□□□□ -1.27
NUP84YDL116W ASK1P35734 292 aa7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms