RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	SAP185	P40856	1058 aa		6.61	□□□□□ -1.35
SIR2	YDL042C	COS12	P53053	380 aa		6.61	□□□□□ -1.35
SIR2	YDL042C	CPR6	P53691	371 aa	Known RBP	6.61	□□□□□ -1.35
SIR2	YDL042C	PSR2	Q07949	397 aa		6.61	□□□□□ -1.35
SIR2	YDL042C	PMT6	P42934	759 aa		6.61	□□□□□ -1.35
SIR2	YDL042C	CCT7	P42943	550 aa	Known RBP	6.61	□□□□□ -1.35
SIR2	YDL042C	TRS31	Q03337	283 aa		6.61	□□□□□ -1.35
SIR2	YDL042C	IWR1	Q07532	353 aa	Predicted RBP	6.61	□□□□□ -1.35
SIR2	YDL042C	CTT1	P06115	562 aa		6.6	□□□□□ -1.35
SIR2	YDL042C	MIS1	P09440	975 aa	Known RBP	6.6	□□□□□ -1.35
SIR2	YDL042C	KIN3	P22209	435 aa		6.6	□□□□□ -1.35
SIR2	YDL042C	PRP45	P28004	379 aa	Predicted RBP	6.6	□□□□□ -1.35
SIR2	YDL042C	YIP4	P53093	235 aa		6.6	□□□□□ -1.35
SIR2	YDL042C	SSK2	P53599	1579 aa		6.6	□□□□□ -1.35
SIR2	YDL042C	VPS64	Q03944	604 aa		6.6	□□□□□ -1.35
SIR2	YDL042C	YPL216W	Q08964	1102 aa		6.6	□□□□□ -1.35
SIR2	YDL042C	TAF3	Q12297	353 aa		6.6	□□□□□ -1.35
SIR2	YDL042C	CDC43	P18898	376 aa		6.59	□□□□□ -1.35
SIR2	YDL042C	ERR3	P42222	437 aa		6.59	□□□□□ -1.35
SIR2	YDL042C	GND2	P53319	492 aa		6.59	□□□□□ -1.35
SIR2	YDL042C	NGL2	Q03264	515 aa	Known RBP	6.59	□□□□□ -1.35
SIR2	YDL042C	TRS23	Q03784	219 aa		6.59	□□□□□ -1.35
SIR2	YDL042C	TMN2	Q04562	672 aa		6.59	□□□□□ -1.35
SIR2	YDL042C	CIA1	Q05583	330 aa		6.59	□□□□□ -1.35
SIR2	YDL042C	BLS1	Q06071	122 aa		6.59	□□□□□ -1.35
SIR2	YDL042C	STE4	P18851	423 aa		6.58	□□□□□ -1.36
SIR2	YDL042C	BET2	P20133	325 aa		6.58	□□□□□ -1.36
SIR2	YDL042C	VPS34	P22543	875 aa		6.58	□□□□□ -1.36
SIR2	YDL042C	RPS7A	P26786	190 aa	Known RBP	6.58	□□□□□ -1.36
SIR2	YDL042C	FRD1	P32614	470 aa	Known RBP	6.58	□□□□□ -1.36
SIR2	YDL042C	BUD17	P53727	317 aa		6.58	□□□□□ -1.36
SIR2	YDL042C	USA1	Q03714	838 aa		6.58	□□□□□ -1.36
SIR2	YDL042C	ECM16	Q04217	1267 aa	Known RBP	6.58	□□□□□ -1.36
SIR2	YDL042C	MRH1	Q12117	320 aa	Predicted RBP	6.58	□□□□□ -1.36
SIR2	YDL042C	CNE1	P27825	502 aa		6.58	□□□□□ -1.36
SIR2	YDL042C	PUG1	P40100	303 aa		6.58	□□□□□ -1.36
SIR2	YDL042C	IDS2	P46958	469 aa		6.58	□□□□□ -1.36
SIR2	YDL042C	YDR179W-A	Q03983	463 aa		6.58	□□□□□ -1.36
SIR2	YDL042C	RIT1	P23796	513 aa		6.57	□□□□□ -1.36
SIR2	YDL042C	DMC1	P25453	334 aa		6.57	□□□□□ -1.36
SIR2	YDL042C	PRE2	P30656	287 aa	Known RBP	6.57	□□□□□ -1.36
SIR2	YDL042C	MTH1	P35198	433 aa		6.57	□□□□□ -1.36
SIR2	YDL042C	RPS15	Q01855	142 aa	Known RBP	6.57	□□□□□ -1.36
SIR2	YDL042C	ARA2	Q04212	335 aa		6.57	□□□□□ -1.36
SIR2	YDL042C	TAF2	P23255	1407 aa		6.57	□□□□□ -1.36
SIR2	YDL042C	ADE3	P07245	946 aa	Known RBP	6.56	□□□□□ -1.36
SIR2	YDL042C	EXO84	P38261	753 aa		6.56	□□□□□ -1.36
SIR2	YDL042C	CAB2	P40506	365 aa		6.56	□□□□□ -1.36
SIR2	YDL042C	FAF1	P40546	346 aa	Predicted RBP	6.56	□□□□□ -1.36
SIR2	YDL042C	CLB4	P24871	460 aa		6.55	□□□□□ -1.36
SIR2	YDL042C	SWI4	P25302	1093 aa	Known RBP	6.55	□□□□□ -1.36
SIR2	YDL042C	CCL1	P37366	393 aa		6.55	□□□□□ -1.36
SIR2	YDL042C	PIH1	P38768	344 aa		6.55	□□□□□ -1.36
SIR2	YDL042C	AIM6	Q07716	390 aa		6.55	□□□□□ -1.36
SIR2	YDL042C	TGS1	Q12052	315 aa		6.55	□□□□□ -1.36
SIR2	YDL042C	MDM20	Q12387	796 aa	Known RBP	6.55	□□□□□ -1.36
SIR2	YDL042C	LOT5	P34234	306 aa		6.55	□□□□□ -1.36
SIR2	YDL042C	ICL2	Q12031	575 aa		6.55	□□□□□ -1.36
SIR2	YDL042C	NCP1	P16603	691 aa	Known RBP	6.54	□□□□□ -1.36
SIR2	YDL042C	YMC2	P38087	329 aa		6.54	□□□□□ -1.36
SIR2	YDL042C	ATG21	Q02887	496 aa		6.54	□□□□□ -1.36
SIR2	YDL042C	YDL073W	Q07454	984 aa		6.54	□□□□□ -1.36
SIR2	YDL042C	SKI3	P17883	1432 aa	Known RBP	6.54	□□□□□ -1.36
SIR2	YDL042C	ESP1	Q03018	1630 aa		6.53	□□□□□ -1.36
SIR2	YDL042C	NUC1	P08466	329 aa		6.53	□□□□□ -1.36
SIR2	YDL042C	SDH8	P38345	138 aa		6.53	□□□□□ -1.36
SIR2	YDL042C	ARB1	P40024	610 aa	Known RBP	6.53	□□□□□ -1.36
SIR2	YDL042C	ARC35	P53731	342 aa	Known RBP	6.53	□□□□□ -1.36
SIR2	YDL042C	MRPL13	Q02204	264 aa		6.53	□□□□□ -1.36
SIR2	YDL042C	YCL049C	P25577	312 aa		6.52	□□□□□ -1.37
SIR2	YDL042C	MIT1	P40002	666 aa		6.52	□□□□□ -1.37
SIR2	YDL042C	PSF2	P40359	213 aa		6.52	□□□□□ -1.37
SIR2	YDL042C	IMA1	P53051	589 aa		6.52	□□□□□ -1.37
SIR2	YDL042C	YBR138C	P38277	524 aa		6.52	□□□□□ -1.37
SIR2	YDL042C	SMK1	P41808	388 aa		6.52	□□□□□ -1.37
SIR2	YDL042C	VPS73	P53142	486 aa	Known RBP	6.52	□□□□□ -1.37
SIR2	YDL042C	BPT1	P14772	1559 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	SSM4	P40318	1319 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	GFA1	P14742	717 aa	Known RBP	6.51	□□□□□ -1.37
SIR2	YDL042C	YCR061W	P25639	631 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	CDC5	P32562	705 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	BEM3	P32873	1128 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	YPT10	P38146	199 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	PSY4	P38193	441 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	ESF2	P53743	316 aa	Known RBP	6.51	□□□□□ -1.37
SIR2	YDL042C	GTR1	Q00582	310 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	YML131W	Q03102	365 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	TRS130	Q03660	1102 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	CRF1	Q04930	467 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	IRC10	Q08118	586 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	ZPS1	Q12512	249 aa		6.51	□□□□□ -1.37
SIR2	YDL042C	YPK1	P12688	680 aa	Known RBP	6.5	□□□□□ -1.37
SIR2	YDL042C	ARP2	P32381	391 aa	Known RBP	6.5	□□□□□ -1.37
SIR2	YDL042C	MRPL36	P36531	177 aa		6.5	□□□□□ -1.37
SIR2	YDL042C	IML2	P47031	731 aa		6.5	□□□□□ -1.37
SIR2	YDL042C	SAP4	P53036	818 aa		6.5	□□□□□ -1.37
SIR2	YDL042C	MTF2	P10849	440 aa		6.49	□□□□□ -1.37
SIR2	YDL042C	XRS2	P33301	854 aa		6.49	□□□□□ -1.37
SIR2	YDL042C	FSH1	P38777	243 aa	Known RBP	6.49	□□□□□ -1.37
SIR2	YDL042C	SUB1	P54000	292 aa	Known RBP	6.49	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms