RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE3	YBR130C	RIC1	P40395	1056 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	BST1	P43571	1029 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	RFX1	P48743	811 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	TIM50	Q02776	476 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	GIR2	Q03768	265 aa	Predicted RBP	4.8	□□□□□ -1.64
SHE3	YBR130C	ADY4	Q05955	493 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	AIM39	Q08223	395 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	LAS17	Q12446	633 aa		4.8	□□□□□ -1.64
SHE3	YBR130C	CDC31	P06704	161 aa	Known RBP	4.79	□□□□□ -1.64
SHE3	YBR130C	MRP7	P12687	371 aa		4.79	□□□□□ -1.64
SHE3	YBR130C	VPS34	P22543	875 aa		4.79	□□□□□ -1.64
SHE3	YBR130C	SWI4	P25302	1093 aa	Known RBP	4.79	□□□□□ -1.64
SHE3	YBR130C	DSS4	P32601	143 aa		4.79	□□□□□ -1.64
SHE3	YBR130C	IFA38	P38286	347 aa		4.79	□□□□□ -1.64
SHE3	YBR130C	FMP52	P40008	231 aa		4.79	□□□□□ -1.64
SHE3	YBR130C	NDE1	P40215	560 aa		4.79	□□□□□ -1.64
SHE3	YBR130C	KHA1	P40309	873 aa		4.79	□□□□□ -1.64
SHE3	YBR130C	THI6	P41835	540 aa		4.79	□□□□□ -1.64
SHE3	YBR130C	NTO1	Q12311	748 aa		4.79	□□□□□ -1.64
SHE3	YBR130C	PNS1	Q12412	539 aa		4.79	□□□□□ -1.64
SHE3	YBR130C	PET122	P10355	254 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	CAP1	P28495	268 aa	Known RBP	4.78	□□□□□ -1.64
SHE3	YBR130C	EFT1	P32324	842 aa	Known RBP	4.78	□□□□□ -1.64
SHE3	YBR130C	PAH1	P32567	862 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	CTP1	P38152	299 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	AXL2	P38928	823 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	AIM21	P40563	679 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	IST3	P40565	148 aa	Predicted RBP	4.78	□□□□□ -1.64
SHE3	YBR130C	YJL163C	P46996	555 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	MPS3	P47069	682 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	BNA1	P47096	177 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	PHO23	P50947	330 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	PAN2	P53010	1115 aa	Predicted RBP	4.78	□□□□□ -1.64
SHE3	YBR130C	YGR054W	P53235	642 aa	Known RBP	4.78	□□□□□ -1.64
SHE3	YBR130C	RNT1	Q02555	471 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	YSH1	Q06224	779 aa	Predicted RBP	4.78	□□□□□ -1.64
SHE3	YBR130C	AIM6	Q07716	390 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	FRE5	Q08908	694 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	TRM8	Q12009	286 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	SKM1	Q12469	655 aa		4.78	□□□□□ -1.64
SHE3	YBR130C	YLR302C	O13544	120 aa		4.77	□□□□□ -1.65
SHE3	YBR130C	SEM1	O94742	89 aa		4.77	□□□□□ -1.65
SHE3	YBR130C	GUK1	P15454	187 aa	Known RBP	4.77	□□□□□ -1.65
SHE3	YBR130C	ERG4	P25340	473 aa		4.77	□□□□□ -1.65
SHE3	YBR130C	PMI40	P29952	429 aa	Known RBP	4.77	□□□□□ -1.65
SHE3	YBR130C	LNP1	P38878	278 aa		4.77	□□□□□ -1.65
SHE3	YBR130C	YEL068C	P39977	110 aa		4.77	□□□□□ -1.65
SHE3	YBR130C	BSC5	P53755	489 aa		4.77	□□□□□ -1.65
SHE3	YBR130C	ARR3	Q06598	404 aa		4.77	□□□□□ -1.65
SHE3	YBR130C	IRC13	Q08630	104 aa		4.77	□□□□□ -1.65
SHE3	YBR130C	COX17	Q12287	69 aa		4.77	□□□□□ -1.65
SHE3	YBR130C	TAD3	Q9URQ3	322 aa		4.77	□□□□□ -1.65
SHE3	YBR130C	SIR3	P06701	978 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	SAN1	P22470	610 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	PRE8	P23639	250 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	FUB1	P25659	250 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	HRR25	P29295	494 aa	Known RBP	4.76	□□□□□ -1.65
SHE3	YBR130C	CBF2	P32504	956 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	TRM2	P33753	639 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	DEF1	P35732	738 aa	Known RBP	4.76	□□□□□ -1.65
SHE3	YBR130C	PHO11	P35842	467 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	MUD2	P36084	527 aa	Known RBP	4.76	□□□□□ -1.65
SHE3	YBR130C	SET3	P36124	751 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	NOP4	P37838	685 aa	Known RBP	4.76	□□□□□ -1.65
SHE3	YBR130C	APL3	P38065	1025 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	PHO12	P38693	467 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	VPS8	P39702	1274 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	ZAP1	P47043	880 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	BUL1	P48524	976 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	DAK1	P54838	584 aa	Known RBP	4.76	□□□□□ -1.65
SHE3	YBR130C	HOF1	Q05080	669 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	YDL086W	Q07505	273 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	NUS1	Q12063	375 aa		4.76	□□□□□ -1.65
SHE3	YBR130C	CDC16	P09798	840 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	SPO16	P17122	198 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	STB5	P38699	743 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	ESL1	P40456	1118 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	DPH1	P40487	425 aa	Known RBP	4.75	□□□□□ -1.65
SHE3	YBR130C	PSP1	P50896	841 aa	Known RBP	4.75	□□□□□ -1.65
SHE3	YBR130C	COS12	P53053	380 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	COG1	P53079	417 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	RIA1	P53893	1110 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	SNO4	Q04902	237 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	TFC6	Q06339	672 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	IZH3	Q07959	543 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	HSP33	Q08914	237 aa	Known RBP	4.75	□□□□□ -1.65
SHE3	YBR130C	YPL216W	Q08964	1102 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	HSP32	Q08992	237 aa		4.75	□□□□□ -1.65
SHE3	YBR130C	ERG27	Q12452	347 aa	Known RBP	4.75	□□□□□ -1.65
SHE3	YBR130C	ATP2	P00830	511 aa	Known RBP	4.74	□□□□□ -1.65
SHE3	YBR130C	ALG7	P07286	448 aa		4.74	□□□□□ -1.65
SHE3	YBR130C	AAC3	P18238	307 aa		4.74	□□□□□ -1.65
SHE3	YBR130C	CMK1	P27466	446 aa	Known RBP	4.74	□□□□□ -1.65
SHE3	YBR130C	LOT5	P34234	306 aa		4.74	□□□□□ -1.65
SHE3	YBR130C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
SHE3	YBR130C	YJR061W	P40355	935 aa		4.74	□□□□□ -1.65
SHE3	YBR130C	YIL161W	P40449	235 aa	Known RBP	4.74	□□□□□ -1.65
SHE3	YBR130C	ASE1	P50275	885 aa		4.74	□□□□□ -1.65
SHE3	YBR130C	FHN1	P53279	174 aa		4.74	□□□□□ -1.65
SHE3	YBR130C	RBG2	P53295	368 aa	Known RBP	4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms