RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ZNF70Q9UC06 446 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-218ENST00000641491 MKRN1Q9UHC7 482 aaKnown RBP15.44■□□□□ 0.06
PHGDH-218ENST00000641491 PSME4Q14997 1843 aa15.44■□□□□ 0.06
PHGDH-218ENST00000641491 DOCK2Q92608 1830 aa15.44■□□□□ 0.06
PHGDH-218ENST00000641491 CHGBP05060 677 aa15.43■□□□□ 0.06
PHGDH-218ENST00000641491 SPDYE2Q495Y8 402 aa15.43■□□□□ 0.06
PHGDH-218ENST00000641491 SDR42E1Q8WUS8 393 aa15.43■□□□□ 0.06
PHGDH-218ENST00000641491 PRMT6Q96LA8 375 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-218ENST00000641491 ZNF287Q9HBT7 754 aa15.43■□□□□ 0.06
PHGDH-218ENST00000641491 GGA3Q9NZ52 723 aa15.43■□□□□ 0.06
PHGDH-218ENST00000641491 SHTN1A0MZ66 631 aa15.42■□□□□ 0.06
PHGDH-218ENST00000641491 HSPD1P10809 573 aaKnown RBP15.42■□□□□ 0.06
PHGDH-218ENST00000641491 NF2P35240 595 aa15.42■□□□□ 0.06
PHGDH-218ENST00000641491 TCP10Q12799 353 aa15.42■□□□□ 0.06
PHGDH-218ENST00000641491 NBPF9Q3BBW0 867 aa15.42■□□□□ 0.06
PHGDH-218ENST00000641491 C8orf34Q49A92 452 aa15.42■□□□□ 0.06
PHGDH-218ENST00000641491 ANGEL2Q5VTE6 544 aaKnown RBP15.42■□□□□ 0.06
PHGDH-218ENST00000641491 TTC6Q86TZ1 520 aa15.42■□□□□ 0.06
PHGDH-218ENST00000641491 CRACR2BQ8N4Y2 399 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-218ENST00000641491 TRPM4Q8TD43 1214 aa15.42■□□□□ 0.06
PHGDH-218ENST00000641491 ZNF384Q8TF68 577 aa15.42■□□□□ 0.06
PHGDH-218ENST00000641491 DHX36Q9H2U1 1008 aaKnown RBP15.42■□□□□ 0.06
PHGDH-218ENST00000641491 TAF1DQ9H5J8 278 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-218ENST00000641491 PCDH10Q9P2E7 1040 aa15.42■□□□□ 0.06
PHGDH-218ENST00000641491 FLT1P17948 1338 aa15.42■□□□□ 0.06
PHGDH-218ENST00000641491 MINDY4BA8MYZ0 360 aa15.41■□□□□ 0.06
PHGDH-218ENST00000641491 ZNF213O14771 459 aa15.41■□□□□ 0.06
PHGDH-218ENST00000641491 EPB41L2O43491 1005 aaKnown RBP15.41■□□□□ 0.06
PHGDH-218ENST00000641491 ENTPD3O75355 529 aa15.41■□□□□ 0.06
PHGDH-218ENST00000641491 CACNB3P54284 484 aa15.41■□□□□ 0.06
PHGDH-218ENST00000641491 TRDNQ13061 729 aa15.41■□□□□ 0.06
PHGDH-218ENST00000641491 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
PHGDH-218ENST00000641491 IFNL3Q8IZI9 196 aa15.41■□□□□ 0.06
PHGDH-218ENST00000641491 ZC3H15Q8WU90 426 aaKnown RBP15.41■□□□□ 0.06
PHGDH-218ENST00000641491 TOMM22Q9NS69 142 aa15.41■□□□□ 0.06
PHGDH-218ENST00000641491 SAP30BPQ9UHR5 308 aaKnown RBP15.41■□□□□ 0.06
PHGDH-218ENST00000641491 PPP2R3BQ9Y5P8 575 aa15.41■□□□□ 0.06
PHGDH-218ENST00000641491 MYH7P12883 1935 aa15.41■□□□□ 0.06
PHGDH-218ENST00000641491 PRKAB2O43741 272 aa15.4■□□□□ 0.06
PHGDH-218ENST00000641491 CTCFP49711 727 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-218ENST00000641491 RHBDL3P58872 404 aa15.4■□□□□ 0.06
PHGDH-218ENST00000641491 FKBP1CQ5VVH2 108 aa15.4■□□□□ 0.06
PHGDH-218ENST00000641491 IDI2Q9BXS1 227 aa15.4■□□□□ 0.06
PHGDH-218ENST00000641491 OSBPL5Q9H0X9 879 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-218ENST00000641491 RNF41Q9H4P4 317 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-218ENST00000641491 PCDHAC2Q9Y5I4 1007 aa15.4■□□□□ 0.06
PHGDH-218ENST00000641491 RBM8AQ9Y5S9 174 aaKnown RBP15.4■□□□□ 0.06
PHGDH-218ENST00000641491 PITPNM2Q9BZ72 1349 aa15.4■□□□□ 0.06
PHGDH-218ENST00000641491 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
PHGDH-218ENST00000641491 PDE4BQ07343 736 aa15.39■□□□□ 0.05
PHGDH-218ENST00000641491 FAM83AQ86UY5 434 aa15.39■□□□□ 0.05
PHGDH-218ENST00000641491 LDHDQ86WU2 507 aa15.39■□□□□ 0.05
PHGDH-218ENST00000641491 CSRNP1Q96S65 589 aa15.39■□□□□ 0.05
PHGDH-218ENST00000641491 DCP1AQ9NPI6 582 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-218ENST00000641491 ZMYM6O95789 1325 aa15.39■□□□□ 0.05
PHGDH-218ENST00000641491 CNTNAP1P78357 1384 aa15.38■□□□□ 0.05
PHGDH-218ENST00000641491 GSG1L2A8MUP6 293 aa15.38■□□□□ 0.05
PHGDH-218ENST00000641491 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
PHGDH-218ENST00000641491 WDHD1O75717 1129 aaPredicted RBP15.38■□□□□ 0.05
PHGDH-218ENST00000641491 KRT32Q14532 448 aa15.38■□□□□ 0.05
PHGDH-218ENST00000641491 SLC4A8Q2Y0W8 1093 aa15.38■□□□□ 0.05
PHGDH-218ENST00000641491 VPS53Q5VIR6 699 aa15.38■□□□□ 0.05
PHGDH-218ENST00000641491 DCAF15Q66K64 600 aa15.38■□□□□ 0.05
PHGDH-218ENST00000641491 KRT26Q7Z3Y9 468 aa15.38■□□□□ 0.05
PHGDH-218ENST00000641491 RALYLQ86SE5 291 aaKnown RBP15.38■□□□□ 0.05
PHGDH-218ENST00000641491 FAM151AQ8WW52 585 aa15.38■□□□□ 0.05
PHGDH-218ENST00000641491 BACH2Q9BYV9 841 aa15.38■□□□□ 0.05
PHGDH-218ENST00000641491 LSG1Q9H089 658 aaKnown RBP15.38■□□□□ 0.05
PHGDH-218ENST00000641491 MKNK2Q9HBH9 465 aa15.38■□□□□ 0.05
PHGDH-218ENST00000641491 USP17L12C9JPN9 530 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 USP17L21D6R901 530 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 EGFRP00533 1210 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 FGAP02671 866 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 PPARAQ07869 468 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 NFIAQ12857 509 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 RASA3Q14644 834 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 ALX1Q15699 326 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 SUPT20HL1Q3ZLR7 823 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 ZBED3Q96IU2 234 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-218ENST00000641491 DEFB129Q9H1M3 183 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 WBP1LQ9NX94 342 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 PI4KBQ9UBF8 816 aa15.37■□□□□ 0.05
PHGDH-218ENST00000641491 HAND2P61296 217 aa15.36■□□□□ 0.05
PHGDH-218ENST00000641491 PTH1RQ03431 593 aa15.36■□□□□ 0.05
PHGDH-218ENST00000641491 TTLL12Q14166 644 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-218ENST00000641491 MFSD6Q6ZSS7 791 aa15.36■□□□□ 0.05
PHGDH-218ENST00000641491 CDC37L1Q7L3B6 337 aa15.36■□□□□ 0.05
PHGDH-218ENST00000641491 MAP4K1Q92918 833 aa15.36■□□□□ 0.05
PHGDH-218ENST00000641491 C22orf23Q9BZE7 217 aa15.36■□□□□ 0.05
PHGDH-218ENST00000641491 CNNM2Q9H8M5 875 aa15.36■□□□□ 0.05
PHGDH-218ENST00000641491 SWAP70Q9UH65 585 aa15.36■□□□□ 0.05
PHGDH-218ENST00000641491 PALD1Q9ULE6 856 aa15.36■□□□□ 0.05
PHGDH-218ENST00000641491 SCN4AP35499 1836 aa15.36■□□□□ 0.05
PHGDH-218ENST00000641491 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
PHGDH-218ENST00000641491 POTEJP0CG39 1038 aa15.35■□□□□ 0.05
PHGDH-218ENST00000641491 PCP11498 1178 aaKnown RBP15.35■□□□□ 0.05
PHGDH-218ENST00000641491 PSMA5P28066 241 aa15.35■□□□□ 0.05
PHGDH-218ENST00000641491 FGD1P98174 961 aa15.35■□□□□ 0.05
PHGDH-218ENST00000641491 RRP12Q5JTH9 1297 aaKnown RBP15.35■□□□□ 0.05
PHGDH-218ENST00000641491 CREB3L3Q68CJ9 461 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms