RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 LEO1Q8WVC0 666 aaPredicted RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 NSUN4Q96CB9 384 aaKnown RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 RIOK1Q9BRS2 568 aaKnown RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 NCOA5Q9HCD5 579 aaKnown RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 EPB41L4AQ9HCS5 686 aaPredicted RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 RBM28Q9NW13 759 aaKnown RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 TFCP2L1Q9NZI6 479 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 RBM27Q9P2N5 1060 aaKnown RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 GGA1Q9UJY5 639 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 BRPF3Q9ULD4 1205 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 IQSEC3Q9UPP2 1182 aaPredicted RBP9.68□□□□□ -0.86
PNKP-231ENST00000640501 CACNA1SQ13698 1873 aa9.68□□□□□ -0.86
PNKP-231ENST00000640501 NEDD4P46934 1319 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 CTDNEP1O95476 244 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 PDE6BP35913 854 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 MECOMQ03112 1051 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 CTDSPL2Q05D32 466 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 CHAF1AQ13111 956 aaPredicted RBP9.67□□□□□ -0.86
PNKP-231ENST00000640501 RTN1Q16799 776 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 SBK1Q52WX2 424 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 HS1BP3Q53T59 392 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 CYB5R4Q7L1T6 521 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 CATIPQ7Z7H3 387 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 MICU3Q86XE3 530 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 GAS2L3Q86XJ1 694 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 ALG1Q9BT22 464 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 TNMDQ9H2S6 317 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 LY9Q9HBG7 655 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 LRRC4BQ9NT99 713 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 PODXL2Q9NZ53 605 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 ZSWIM5Q9P217 1185 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 RCOR1Q9UKL0 485 aa9.67□□□□□ -0.86
PNKP-231ENST00000640501 NSFL1CQ9UNZ2 370 aaKnown RBP9.67□□□□□ -0.86
PNKP-231ENST00000640501 A0A0G2JLW4 131 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 ORC4O43929 436 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 KINO60870 393 aaKnown RBP9.66□□□□□ -0.86
PNKP-231ENST00000640501 UFL1O94874 794 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 DEXIO95424 95 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 YEATS4O95619 227 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 IFNAR1P17181 557 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 USP5P45974 858 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 STK38Q15208 465 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 ZRSR1Q15695 479 aaKnown RBP9.66□□□□□ -0.86
PNKP-231ENST00000640501 SASS6Q6UVJ0 657 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 TTC6Q86TZ1 520 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 TDRD7Q8NHU6 1098 aaKnown RBP9.66□□□□□ -0.86
PNKP-231ENST00000640501 PPP1R9BQ96SB3 815 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 BRMS1Q9HCU9 246 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 HPS5Q9UPZ3 1129 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 SUGT1Q9Y2Z0 365 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 PARP3Q9Y6F1 533 aa9.66□□□□□ -0.86
PNKP-231ENST00000640501 COL1A1P02452 1464 aaPredicted RBP9.66□□□□□ -0.86
PNKP-231ENST00000640501 LRRC37AA6NMS7 1700 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 KLRG2A4D1S0 409 aaPredicted RBP9.65□□□□□ -0.86
PNKP-231ENST00000640501 PPEF1O14829 653 aaPredicted RBP9.65□□□□□ -0.86
PNKP-231ENST00000640501 PRKAB2O43741 272 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 DDAH1O94760 285 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 FMNL1O95466 1100 aaPredicted RBP9.65□□□□□ -0.86
PNKP-231ENST00000640501 APBA3O96018 575 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 NPR1P16066 1061 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 RXRBP28702 533 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 KIF5BP33176 963 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 ME1P48163 572 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 COL9A3Q14050 684 aaPredicted RBP9.65□□□□□ -0.86
PNKP-231ENST00000640501 IFIT1BQ5T764 474 aaKnown RBP9.65□□□□□ -0.86
PNKP-231ENST00000640501 SP8Q8IXZ3 490 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 SDR42E1Q8WUS8 393 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 ZSCAN10Q96SZ4 725 aaPredicted RBP9.65□□□□□ -0.86
PNKP-231ENST00000640501 EYA3Q99504 573 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 POLR3EQ9NVU0 708 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 AATFQ9NY61 560 aaKnown RBP eCLIP9.65□□□□□ -0.86
PNKP-231ENST00000640501 RTEL1Q9NZ71 1219 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 TFIP11Q9UBB9 837 aaKnown RBP9.65□□□□□ -0.86
PNKP-231ENST00000640501 CEP131Q9UPN4 1083 aa9.65□□□□□ -0.86
PNKP-231ENST00000640501 DLEC1Q9Y238 1755 aa9.65□□□□□ -0.87
PNKP-231ENST00000640501 COL4A1P02462 1669 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 TNKSO95271 1327 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 A0A1W2PQ27 194 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 A0A1W2PQ64 194 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 A0A1W2PQD8 194 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 G3V3G9 751 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 POLRMTO00411 1230 aaKnown RBP9.64□□□□□ -0.87
PNKP-231ENST00000640501 RANBP6O60518 1105 aaKnown RBP9.64□□□□□ -0.87
PNKP-231ENST00000640501 FGRP09769 529 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 FDPSP14324 419 aaKnown RBP9.64□□□□□ -0.87
PNKP-231ENST00000640501 IL1R1P14778 569 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 PPP4CP60510 307 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 DCAF8Q5TAQ9 597 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 ZNF654Q8IZM8 581 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 FANCBQ8NB91 859 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 CTCFLQ8NI51 663 aaPredicted RBP9.64□□□□□ -0.87
PNKP-231ENST00000640501 CCDC34Q96HJ3 373 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 CHAMP1Q96JM3 812 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 RNF26Q9BY78 433 aaPredicted RBP9.64□□□□□ -0.87
PNKP-231ENST00000640501 RBSNQ9H1K0 784 aa9.64□□□□□ -0.87
PNKP-231ENST00000640501 MROH7-TTC4A0A0A0MT08 1334 aa9.63□□□□□ -0.87
PNKP-231ENST00000640501 NRXN2Q9P2S2 1712 aa9.63□□□□□ -0.87
PNKP-231ENST00000640501 TSPY2A6NKD2 308 aa9.63□□□□□ -0.87
PNKP-231ENST00000640501 USP17L12C9JPN9 530 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms