RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 FLT1P17948 1338 aa24.79■■□□□ 1.56
SCARB2-219ENST00000639738 ZC3H4Q9UPT8 1303 aaKnown RBP24.79■■□□□ 1.56
SCARB2-219ENST00000639738 USP17L12C9JPN9 530 aa24.78■■□□□ 1.56
SCARB2-219ENST00000639738 USP17L21D6R901 530 aa24.78■■□□□ 1.56
SCARB2-219ENST00000639738 TDO2P48775 406 aa24.78■■□□□ 1.56
SCARB2-219ENST00000639738 RBM5P52756 815 aaKnown RBP eCLIP24.78■■□□□ 1.56
SCARB2-219ENST00000639738 HAND2P61296 217 aa24.78■■□□□ 1.56
SCARB2-219ENST00000639738 NFIAQ12857 509 aa24.78■■□□□ 1.56
SCARB2-219ENST00000639738 DLGAP5Q15398 846 aa24.78■■□□□ 1.56
SCARB2-219ENST00000639738 IMMTQ16891 758 aaKnown RBP24.78■■□□□ 1.56
SCARB2-219ENST00000639738 MAPKAPK5Q8IW41 473 aa24.78■■□□□ 1.56
SCARB2-219ENST00000639738 MICALL2Q8IY33 904 aa24.78■■□□□ 1.56
SCARB2-219ENST00000639738 TM6SF1Q9BZW5 370 aa24.78■■□□□ 1.56
SCARB2-219ENST00000639738 TDRD3Q9H7E2 651 aaKnown RBP24.78■■□□□ 1.56
SCARB2-219ENST00000639738 GPRC5DQ9NZD1 345 aa24.78■■□□□ 1.56
SCARB2-219ENST00000639738 CYP2D7A0A087X1C5 515 aa24.77■■□□□ 1.56
SCARB2-219ENST00000639738 NPM3O75607 178 aaKnown RBP24.77■■□□□ 1.56
SCARB2-219ENST00000639738 DDNO94850 711 aaPredicted RBP24.77■■□□□ 1.56
SCARB2-219ENST00000639738 USP5P45974 858 aa24.77■■□□□ 1.56
SCARB2-219ENST00000639738 TBC1D10CQ8IV04 446 aa24.77■■□□□ 1.56
SCARB2-219ENST00000639738 FAM198AQ9UFP1 575 aa24.77■■□□□ 1.56
SCARB2-219ENST00000639738 E7EWF7 191 aa24.76■■□□□ 1.55
SCARB2-219ENST00000639738 ZNF213O14771 459 aa24.76■■□□□ 1.55
SCARB2-219ENST00000639738 ZKSCAN1P17029 563 aaPredicted RBP24.76■■□□□ 1.55
SCARB2-219ENST00000639738 WNT10BO00744 389 aa24.76■■□□□ 1.55
SCARB2-219ENST00000639738 CYP2D6P10635 497 aa24.76■■□□□ 1.55
SCARB2-219ENST00000639738 PPARAQ07869 468 aa24.76■■□□□ 1.55
SCARB2-219ENST00000639738 SPDYE2Q495Y8 402 aa24.76■■□□□ 1.55
SCARB2-219ENST00000639738 C12orf60Q5U649 245 aa24.76■■□□□ 1.55
SCARB2-219ENST00000639738 NKX2-3Q8TAU0 364 aa24.76■■□□□ 1.55
SCARB2-219ENST00000639738 ZSWIM6Q9HCJ5 1215 aa24.76■■□□□ 1.55
SCARB2-219ENST00000639738 SIPA1L1O43166 1804 aa24.75■■□□□ 1.55
SCARB2-219ENST00000639738 FGRP09769 529 aa24.75■■□□□ 1.55
SCARB2-219ENST00000639738 RABEP1Q15276 862 aa24.75■■□□□ 1.55
SCARB2-219ENST00000639738 NBPF9Q3BBW0 867 aa24.75■■□□□ 1.55
SCARB2-219ENST00000639738 ZFPM1Q8IX07 1006 aa24.75■■□□□ 1.55
SCARB2-219ENST00000639738 ZNF70Q9UC06 446 aaPredicted RBP24.75■■□□□ 1.55
SCARB2-219ENST00000639738 CACNB3P54284 484 aa24.74■■□□□ 1.55
SCARB2-219ENST00000639738 CTDSPL2Q05D32 466 aa24.74■■□□□ 1.55
SCARB2-219ENST00000639738 SAMD7Q7Z3H4 446 aa24.74■■□□□ 1.55
SCARB2-219ENST00000639738 INCENPQ9NQS7 918 aa24.74■■□□□ 1.55
SCARB2-219ENST00000639738 MCM9Q9NXL9 1143 aa24.74■■□□□ 1.55
SCARB2-219ENST00000639738 ARPP21Q9UBL0 812 aaPredicted RBP24.74■■□□□ 1.55
SCARB2-219ENST00000639738 KIF3CO14782 793 aa24.73■■□□□ 1.55
SCARB2-219ENST00000639738 KRT32Q14532 448 aa24.73■■□□□ 1.55
SCARB2-219ENST00000639738 L3MBTL3Q96JM7 780 aaPredicted RBP24.73■■□□□ 1.55
SCARB2-219ENST00000639738 JAKMIP1Q96N16 626 aaKnown RBP24.73■■□□□ 1.55
SCARB2-219ENST00000639738 OSBPL5Q9H0X9 879 aaPredicted RBP24.73■■□□□ 1.55
SCARB2-219ENST00000639738 ROBO3Q96MS0 1386 aa24.72■■□□□ 1.55
SCARB2-219ENST00000639738 EPS15P42566 896 aa24.72■■□□□ 1.55
SCARB2-219ENST00000639738 PLCD1P51178 756 aa24.72■■□□□ 1.55
SCARB2-219ENST00000639738 STAG1Q8WVM7 1258 aa24.72■■□□□ 1.55
SCARB2-219ENST00000639738 CNTNAP1P78357 1384 aa24.72■■□□□ 1.55
SCARB2-219ENST00000639738 MINDY4BA8MYZ0 360 aa24.71■■□□□ 1.55
SCARB2-219ENST00000639738 CPA1P15085 419 aa24.71■■□□□ 1.55
SCARB2-219ENST00000639738 AKNAD1Q5T1N1 836 aa24.71■■□□□ 1.55
SCARB2-219ENST00000639738 FKBP1CQ5VVH2 108 aa24.71■■□□□ 1.55
SCARB2-219ENST00000639738 SH3BP5LQ7L8J4 393 aa24.71■■□□□ 1.55
SCARB2-219ENST00000639738 TTC14Q96N46 770 aa24.71■■□□□ 1.55
SCARB2-219ENST00000639738 UPF3BQ9BZI7 483 aaKnown RBP24.71■■□□□ 1.55
SCARB2-219ENST00000639738 SAP30BPQ9UHR5 308 aaKnown RBP24.71■■□□□ 1.55
SCARB2-219ENST00000639738 COL2A1P02458 1487 aaPredicted RBP24.71■■□□□ 1.55
SCARB2-219ENST00000639738 ENTPD3O75355 529 aa24.71■■□□□ 1.55
SCARB2-219ENST00000639738 CD2BP2O95400 341 aaKnown RBP24.71■■□□□ 1.55
SCARB2-219ENST00000639738 PICALMQ13492 652 aa24.71■■□□□ 1.55
SCARB2-219ENST00000639738 TBC1D10BQ4KMP7 808 aaPredicted RBP24.71■■□□□ 1.55
SCARB2-219ENST00000639738 DDRGK1Q96HY6 314 aa24.71■■□□□ 1.55
SCARB2-219ENST00000639738 NEK1Q96PY6 1258 aa24.71■■□□□ 1.55
SCARB2-219ENST00000639738 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.71■■□□□ 1.55
SCARB2-219ENST00000639738 NEDD4P46934 1319 aa24.7■■□□□ 1.54
SCARB2-219ENST00000639738 CLRN2A0PK11 232 aa24.7■■□□□ 1.54
SCARB2-219ENST00000639738 GLTPD2A6NH11 291 aa24.7■■□□□ 1.54
SCARB2-219ENST00000639738 H7C1D1 291 aa24.7■■□□□ 1.54
SCARB2-219ENST00000639738 CASTP20810 708 aaKnown RBP24.7■■□□□ 1.54
SCARB2-219ENST00000639738 HIRAP54198 1017 aaPredicted RBP24.7■■□□□ 1.54
SCARB2-219ENST00000639738 EXOSC10Q01780 885 aaKnown RBP24.7■■□□□ 1.54
SCARB2-219ENST00000639738 RUFY3Q7L099 469 aa24.7■■□□□ 1.54
SCARB2-219ENST00000639738 MB21D2Q8IYB1 491 aaPredicted RBP24.7■■□□□ 1.54
SCARB2-219ENST00000639738 TRPM4Q8TD43 1214 aa24.7■■□□□ 1.54
SCARB2-219ENST00000639738 PGAP2Q9UHJ9 254 aa24.7■■□□□ 1.54
SCARB2-219ENST00000639738 ASTN2O75129 1339 aaPredicted RBP24.69■■□□□ 1.54
SCARB2-219ENST00000639738 PSMA5P28066 241 aa24.69■■□□□ 1.54
SCARB2-219ENST00000639738 KIF4BQ2VIQ3 1234 aa24.69■■□□□ 1.54
SCARB2-219ENST00000639738 RBM26Q5T8P6 1007 aaKnown RBP24.69■■□□□ 1.54
SCARB2-219ENST00000639738 ATRNL1Q5VV63 1379 aa24.68■■□□□ 1.54
SCARB2-219ENST00000639738 WDR90Q96KV7 1748 aa24.68■■□□□ 1.54
SCARB2-219ENST00000639738 RPS6KB1P23443 525 aa24.68■■□□□ 1.54
SCARB2-219ENST00000639738 NEK4P51957 841 aa24.68■■□□□ 1.54
SCARB2-219ENST00000639738 DPY19L2Q6NUT2 758 aa24.68■■□□□ 1.54
SCARB2-219ENST00000639738 SCN4AP35499 1836 aa24.67■■□□□ 1.54
SCARB2-219ENST00000639738 DDTLA6NHG4 134 aaPredicted RBP24.67■■□□□ 1.54
SCARB2-219ENST00000639738 GABPAQ06546 454 aa24.67■■□□□ 1.54
SCARB2-219ENST00000639738 SNX21Q969T3 373 aa24.67■■□□□ 1.54
SCARB2-219ENST00000639738 ALDH8A1Q9H2A2 487 aaPredicted RBP24.67■■□□□ 1.54
SCARB2-219ENST00000639738 POTECB2RU33 542 aa24.66■■□□□ 1.54
SCARB2-219ENST00000639738 POLR3DP05423 398 aaPredicted RBP24.66■■□□□ 1.54
SCARB2-219ENST00000639738 ANTXR2P58335 489 aa24.66■■□□□ 1.54
SCARB2-219ENST00000639738 TCP10Q12799 353 aa24.66■■□□□ 1.54
SCARB2-219ENST00000639738 SLC4A8Q2Y0W8 1093 aa24.66■■□□□ 1.54
SCARB2-219ENST00000639738 IL27Q8NEV9 243 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms