RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ACSBG1Q96GR2 724 aa20.69■□□□□ 0.9
SCARB2-213ENST00000638680 ANAPC4Q9UJX5 808 aa20.69■□□□□ 0.9
SCARB2-213ENST00000638680 RNMTO43148 476 aaKnown RBP20.69■□□□□ 0.9
SCARB2-213ENST00000638680 LRRC45Q96CN5 670 aa20.69■□□□□ 0.9
SCARB2-213ENST00000638680 ANGEL1Q9UNK9 670 aaKnown RBP20.69■□□□□ 0.9
SCARB2-213ENST00000638680 FRMD4BQ9Y2L6 1034 aa20.69■□□□□ 0.9
SCARB2-213ENST00000638680 TRIM35Q9UPQ4 493 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 PNMA6EA0A0J9YXQ4 647 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 UAP1Q16222 522 aaPredicted RBP20.68■□□□□ 0.9
SCARB2-213ENST00000638680 MAP7D1Q3KQU3 841 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 SIRT1Q96EB6 747 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 SSX2IPQ9Y2D8 614 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 BIVM-ERCC5R4GMW8 1640 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 TNFAIP3P21580 790 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 POSTNQ15063 836 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.68■□□□□ 0.9
SCARB2-213ENST00000638680 A0A1B0GUA9 196 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 SPOPO43791 374 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 ALDH3A1P30838 453 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 TRIM31Q9BZY9 425 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 JAG2Q9Y219 1238 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 RAPGEF6Q8TEU7 1601 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 RAB3IL1Q8TBN0 382 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 SLF1Q9BQI6 1058 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 NUP58Q9BVL2 599 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 XPO4Q9C0E2 1151 aaKnown RBP20.68■□□□□ 0.9
SCARB2-213ENST00000638680 ARMT1Q9H993 441 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 TXNDC16Q9P2K2 825 aa20.68■□□□□ 0.9
SCARB2-213ENST00000638680 V9GY48 417 aaPredicted RBP20.68■□□□□ 0.9
SCARB2-213ENST00000638680 PSMB7Q99436 277 aa20.67■□□□□ 0.9
SCARB2-213ENST00000638680 SYCP2Q9BX26 1530 aa20.67■□□□□ 0.9
SCARB2-213ENST00000638680 FMNL3Q8IVF7 1028 aa20.67■□□□□ 0.9
SCARB2-213ENST00000638680 MPHOSPH6Q99547 160 aaKnown RBP20.67■□□□□ 0.9
SCARB2-213ENST00000638680 DDX23Q9BUQ8 820 aaKnown RBP20.67■□□□□ 0.9
SCARB2-213ENST00000638680 ACTN4O43707 911 aaKnown RBP20.67■□□□□ 0.9
SCARB2-213ENST00000638680 KRT9P35527 623 aa20.67■□□□□ 0.9
SCARB2-213ENST00000638680 BEND3Q5T5X7 828 aa20.67■□□□□ 0.9
SCARB2-213ENST00000638680 GPIHBP1Q8IV16 184 aa20.67■□□□□ 0.9
SCARB2-213ENST00000638680 GPR161Q8N6U8 529 aaKnown RBP20.67■□□□□ 0.9
SCARB2-213ENST00000638680 DCAF8L1A6NGE4 600 aa20.67■□□□□ 0.9
SCARB2-213ENST00000638680 CCNT1O60563 726 aaKnown RBP20.67■□□□□ 0.9
SCARB2-213ENST00000638680 BUB1BO60566 1050 aaPredicted RBP20.67■□□□□ 0.9
SCARB2-213ENST00000638680 CIB2O75838 187 aa20.67■□□□□ 0.9
SCARB2-213ENST00000638680 CFAP157Q5JU67 520 aa20.67■□□□□ 0.9
SCARB2-213ENST00000638680 KIAA1524Q8TCG1 905 aa20.67■□□□□ 0.9
SCARB2-213ENST00000638680 RNF123Q5XPI4 1314 aa20.66■□□□□ 0.9
SCARB2-213ENST00000638680 KRT5P13647 590 aa20.66■□□□□ 0.9
SCARB2-213ENST00000638680 TRMT44Q8IYL2 757 aaKnown RBP20.66■□□□□ 0.9
SCARB2-213ENST00000638680 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.66■□□□□ 0.9
SCARB2-213ENST00000638680 NGLY1Q96IV0 654 aa20.66■□□□□ 0.9
SCARB2-213ENST00000638680 A6NNZ2 444 aa20.66■□□□□ 0.9
SCARB2-213ENST00000638680 TUBB8Q3ZCM7 444 aa20.66■□□□□ 0.9
SCARB2-213ENST00000638680 TTC38Q5R3I4 469 aa20.66■□□□□ 0.9
SCARB2-213ENST00000638680 KLHL7Q8IXQ5 586 aa20.66■□□□□ 0.9
SCARB2-213ENST00000638680 MRRFQ96E11 262 aaKnown RBP20.66■□□□□ 0.9
SCARB2-213ENST00000638680 TNRQ92752 1358 aa20.66■□□□□ 0.9
SCARB2-213ENST00000638680 PLCH2O75038 1416 aa20.66■□□□□ 0.9
SCARB2-213ENST00000638680 DDX21Q9NR30 783 aaKnown RBP eCLIP20.66■□□□□ 0.9
SCARB2-213ENST00000638680 ZNF500O60304 480 aaPredicted RBP20.66■□□□□ 0.9
SCARB2-213ENST00000638680 CEP85LQ5SZL2 805 aa20.66■□□□□ 0.9
SCARB2-213ENST00000638680 PHKBQ93100 1093 aa20.66■□□□□ 0.9
SCARB2-213ENST00000638680 EYA2O00167 538 aa20.65■□□□□ 0.9
SCARB2-213ENST00000638680 PNOCQ13519 176 aa20.65■□□□□ 0.9
SCARB2-213ENST00000638680 MYL10Q9BUA6 226 aa20.65■□□□□ 0.9
SCARB2-213ENST00000638680 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.65■□□□□ 0.9
SCARB2-213ENST00000638680 LDHBP07195 334 aaKnown RBP20.65■□□□□ 0.9
SCARB2-213ENST00000638680 PCK1P35558 622 aa20.65■□□□□ 0.9
SCARB2-213ENST00000638680 CLNS1AP54105 237 aaKnown RBP20.65■□□□□ 0.9
SCARB2-213ENST00000638680 SND1Q7KZF4 910 aaKnown RBP eCLIP20.65■□□□□ 0.92e-6■■□□□ 13.9
SCARB2-213ENST00000638680 PLCG2P16885 1265 aa20.65■□□□□ 0.9
SCARB2-213ENST00000638680 CFAP57Q96MR6 1250 aa20.65■□□□□ 0.9
SCARB2-213ENST00000638680 NDC80O14777 642 aa20.65■□□□□ 0.9
SCARB2-213ENST00000638680 HOXC9P31274 260 aa20.65■□□□□ 0.9
SCARB2-213ENST00000638680 NDUFB9Q9Y6M9 179 aa20.65■□□□□ 0.9
SCARB2-213ENST00000638680 ARHGEF12Q9NZN5 1544 aa20.64■□□□□ 0.9
SCARB2-213ENST00000638680 GPAA1O43292 621 aa20.64■□□□□ 0.9
SCARB2-213ENST00000638680 GIGYF1O75420 1035 aaPredicted RBP20.64■□□□□ 0.9
SCARB2-213ENST00000638680 ADKP55263 362 aaKnown RBP20.64■□□□□ 0.9
SCARB2-213ENST00000638680 KRT40Q6A162 431 aa20.64■□□□□ 0.9
SCARB2-213ENST00000638680 FAM169AQ9Y6X4 670 aa20.64■□□□□ 0.9
SCARB2-213ENST00000638680 HGSO14964 777 aaPredicted RBP20.64■□□□□ 0.89
SCARB2-213ENST00000638680 ME3Q16798 604 aa20.64■□□□□ 0.89
SCARB2-213ENST00000638680 NELFBQ8WX92 580 aa20.64■□□□□ 0.89
SCARB2-213ENST00000638680 XAGE2Q96GT9 111 aa20.64■□□□□ 0.89
SCARB2-213ENST00000638680 NAP1L4Q99733 375 aaKnown RBP20.64■□□□□ 0.89
SCARB2-213ENST00000638680 ARHGAP25P42331 645 aa20.64■□□□□ 0.89
SCARB2-213ENST00000638680 FYB2Q5VWT5 728 aa20.64■□□□□ 0.89
SCARB2-213ENST00000638680 CEP104O60308 925 aa20.64■□□□□ 0.89
SCARB2-213ENST00000638680 APPBP2Q92624 585 aa20.63■□□□□ 0.89
SCARB2-213ENST00000638680 MAK16Q9BXY0 300 aaKnown RBP20.63■□□□□ 0.89
SCARB2-213ENST00000638680 SAP30BPQ9UHR5 308 aaKnown RBP20.63■□□□□ 0.89
SCARB2-213ENST00000638680 USP19O94966 1318 aa20.63■□□□□ 0.89
SCARB2-213ENST00000638680 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
SCARB2-213ENST00000638680 INF2Q27J81 1249 aa20.63■□□□□ 0.89
SCARB2-213ENST00000638680 SLC9C1Q4G0N8 1177 aa20.63■□□□□ 0.89
SCARB2-213ENST00000638680 RUFY4Q6ZNE9 571 aa20.63■□□□□ 0.89
SCARB2-213ENST00000638680 NOL3O60936 208 aaKnown RBP20.63■□□□□ 0.89
SCARB2-213ENST00000638680 MAGEA1P43355 309 aa20.63■□□□□ 0.89
SCARB2-213ENST00000638680 MSANTD4Q8NCY6 345 aa20.63■□□□□ 0.89
SCARB2-213ENST00000638680 GDAP1L1Q96MZ0 367 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms