RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 MXD3Q9BW11 206 aa25.51■■□□□ 1.67
SCARB2-212ENST00000638663 SENP2Q9HC62 589 aa25.51■■□□□ 1.67
SCARB2-212ENST00000638663 IFIT3O14879 490 aaKnown RBP25.5■■□□□ 1.67
SCARB2-212ENST00000638663 CTDNEP1O95476 244 aa25.5■■□□□ 1.67
SCARB2-212ENST00000638663 DPEP1P16444 411 aa25.5■■□□□ 1.67
SCARB2-212ENST00000638663 TTLL6Q8N841 843 aa25.5■■□□□ 1.67
SCARB2-212ENST00000638663 MCM9Q9NXL9 1143 aa25.5■■□□□ 1.67
SCARB2-212ENST00000638663 ARPP21Q9UBL0 812 aaPredicted RBP25.5■■□□□ 1.67
SCARB2-212ENST00000638663 HPS5Q9UPZ3 1129 aa25.5■■□□□ 1.67
SCARB2-212ENST00000638663 MTMR6Q9Y217 621 aa25.5■■□□□ 1.67
SCARB2-212ENST00000638663 ATF5Q9Y2D1 282 aaPredicted RBP25.5■■□□□ 1.67
SCARB2-212ENST00000638663 GPR75-ASB3A0A0A6YYF3 556 aa25.49■■□□□ 1.67
SCARB2-212ENST00000638663 VPS37CA5D8V6 355 aaPredicted RBP25.49■■□□□ 1.67
SCARB2-212ENST00000638663 F8W031 263 aaPredicted RBP25.49■■□□□ 1.67
SCARB2-212ENST00000638663 CYP2D6P10635 497 aa25.49■■□□□ 1.67
SCARB2-212ENST00000638663 PDCP20941 246 aa25.49■■□□□ 1.67
SCARB2-212ENST00000638663 CC2D2BQ6DHV5 1058 aa25.49■■□□□ 1.67
SCARB2-212ENST00000638663 PODNQ7Z5L7 613 aa25.49■■□□□ 1.67
SCARB2-212ENST00000638663 SMARCC2Q8TAQ2 1214 aa25.49■■□□□ 1.67
SCARB2-212ENST00000638663 LY9Q9HBG7 655 aa25.49■■□□□ 1.67
SCARB2-212ENST00000638663 FOXD4L6Q3SYB3 417 aaPredicted RBP25.49■■□□□ 1.67
SCARB2-212ENST00000638663 FOXD4L3Q6VB84 417 aaPredicted RBP25.49■■□□□ 1.67
SCARB2-212ENST00000638663 TGFBRAP1Q8WUH2 860 aa25.49■■□□□ 1.67
SCARB2-212ENST00000638663 FAM163AQ96GL9 167 aaPredicted RBP25.49■■□□□ 1.67
SCARB2-212ENST00000638663 ZKSCAN3Q9BRR0 538 aa25.49■■□□□ 1.67
SCARB2-212ENST00000638663 KCNQ5Q9NR82 932 aa25.49■■□□□ 1.67
SCARB2-212ENST00000638663 SUGT1Q9Y2Z0 365 aa25.49■■□□□ 1.67
SCARB2-212ENST00000638663 PTPDC1A2A3K4 754 aa25.48■■□□□ 1.67
SCARB2-212ENST00000638663 USP17L8P0C7I0 530 aa25.48■■□□□ 1.67
SCARB2-212ENST00000638663 SBK1Q52WX2 424 aa25.48■■□□□ 1.67
SCARB2-212ENST00000638663 ESR2Q92731 530 aa25.48■■□□□ 1.67
SCARB2-212ENST00000638663 MKRN1Q9UHC7 482 aaKnown RBP25.48■■□□□ 1.67
SCARB2-212ENST00000638663 DLEC1Q9Y238 1755 aa25.48■■□□□ 1.67
SCARB2-212ENST00000638663 SNED1Q8TER0 1413 aa25.48■■□□□ 1.67
SCARB2-212ENST00000638663 GAKO14976 1311 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 TRAK2O60296 914 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 PRDM1O75626 825 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 F13A1P00488 732 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 KCNA3P22001 575 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 SLC4A8Q2Y0W8 1093 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 NFXL1Q6ZNB6 911 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 CHMP4CQ96CF2 233 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 ECE2O60344 883 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 PPFIA3O75145 1194 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 AOC3Q16853 763 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 ILDR1Q86SU0 546 aaPredicted RBP25.47■■□□□ 1.67
SCARB2-212ENST00000638663 CERS3Q8IU89 383 aa25.47■■□□□ 1.67
SCARB2-212ENST00000638663 PTMSP20962 102 aa25.46■■□□□ 1.67
SCARB2-212ENST00000638663 LIFRP42702 1097 aa25.46■■□□□ 1.67
SCARB2-212ENST00000638663 SART3Q15020 963 aaKnown RBP25.46■■□□□ 1.67
SCARB2-212ENST00000638663 APOA5Q6Q788 366 aa25.46■■□□□ 1.67
SCARB2-212ENST00000638663 SGMS1Q86VZ5 419 aa25.46■■□□□ 1.67
SCARB2-212ENST00000638663 TEX11Q8IYF3 940 aa25.46■■□□□ 1.67
SCARB2-212ENST00000638663 FAM184AQ8NB25 1140 aa25.46■■□□□ 1.67
SCARB2-212ENST00000638663 TTF2Q9UNY4 1162 aaKnown RBP25.46■■□□□ 1.67
SCARB2-212ENST00000638663 DAGLAQ9Y4D2 1042 aa25.46■■□□□ 1.67
SCARB2-212ENST00000638663 FGRP09769 529 aa25.45■■□□□ 1.67
SCARB2-212ENST00000638663 PLCG2P16885 1265 aa25.45■■□□□ 1.67
SCARB2-212ENST00000638663 HMGN5P82970 282 aaKnown RBP25.45■■□□□ 1.67
SCARB2-212ENST00000638663 MAPKAPK5Q8IW41 473 aa25.45■■□□□ 1.67
SCARB2-212ENST00000638663 LAMB1P07942 1786 aa25.45■■□□□ 1.67
SCARB2-212ENST00000638663 RANBP6O60518 1105 aaKnown RBP25.45■■□□□ 1.66
SCARB2-212ENST00000638663 SLC3A2P08195 630 aaKnown RBP25.45■■□□□ 1.66
SCARB2-212ENST00000638663 PCP11498 1178 aaKnown RBP25.45■■□□□ 1.66
SCARB2-212ENST00000638663 PDIA4P13667 645 aaKnown RBP25.45■■□□□ 1.66
SCARB2-212ENST00000638663 R3HDM1Q15032 1099 aaKnown RBP25.45■■□□□ 1.66
SCARB2-212ENST00000638663 CDC37L1Q7L3B6 337 aa25.45■■□□□ 1.66
SCARB2-212ENST00000638663 SUPT20HQ8NEM7 779 aa25.45■■□□□ 1.66
SCARB2-212ENST00000638663 MTFR1LQ9H019 292 aa25.45■■□□□ 1.66
SCARB2-212ENST00000638663 ERICH2A1L162 156 aa25.44■■□□□ 1.66
SCARB2-212ENST00000638663 DHX16O60231 1041 aaKnown RBP25.44■■□□□ 1.66
SCARB2-212ENST00000638663 RXRAP19793 462 aa25.44■■□□□ 1.66
SCARB2-212ENST00000638663 POLD1P28340 1107 aa25.44■■□□□ 1.66
SCARB2-212ENST00000638663 RHBDL3P58872 404 aa25.44■■□□□ 1.66
SCARB2-212ENST00000638663 KIAA2012Q0VF49 1180 aa25.44■■□□□ 1.66
SCARB2-212ENST00000638663 WTAPQ15007 396 aa25.44■■□□□ 1.66
SCARB2-212ENST00000638663 UBAC1Q9BSL1 405 aa25.44■■□□□ 1.66
SCARB2-212ENST00000638663 MTA3Q9BTC8 594 aa25.44■■□□□ 1.66
SCARB2-212ENST00000638663 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.44■■□□□ 1.66
SCARB2-212ENST00000638663 CCDC69A6NI79 296 aa25.43■■□□□ 1.66
SCARB2-212ENST00000638663 METAP2P50579 478 aaKnown RBP eCLIP25.43■■□□□ 1.66
SCARB2-212ENST00000638663 CCDC93Q567U6 631 aa25.43■■□□□ 1.66
SCARB2-212ENST00000638663 C12orf60Q5U649 245 aa25.43■■□□□ 1.66
SCARB2-212ENST00000638663 MICU3Q86XE3 530 aa25.43■■□□□ 1.66
SCARB2-212ENST00000638663 ZBTB43O43298 467 aa25.43■■□□□ 1.66
SCARB2-212ENST00000638663 SCNN1DP51172 638 aa25.43■■□□□ 1.66
SCARB2-212ENST00000638663 MYL10Q9BUA6 226 aa25.43■■□□□ 1.66
SCARB2-212ENST00000638663 SAP30BPQ9UHR5 308 aaKnown RBP25.43■■□□□ 1.66
SCARB2-212ENST00000638663 SLC12A7Q9Y666 1083 aa25.43■■□□□ 1.66
SCARB2-212ENST00000638663 CPLX1O14810 134 aa25.42■■□□□ 1.66
SCARB2-212ENST00000638663 PPIP5K2O43314 1243 aa25.42■■□□□ 1.66
SCARB2-212ENST00000638663 LMBRD1Q9NUN5 540 aa25.42■■□□□ 1.66
SCARB2-212ENST00000638663 KIF13BQ9NQT8 1826 aa25.42■■□□□ 1.66
SCARB2-212ENST00000638663 NAV1Q8NEY1 1877 aa25.42■■□□□ 1.66
SCARB2-212ENST00000638663 ORC4O43929 436 aa25.41■■□□□ 1.66
SCARB2-212ENST00000638663 PRPF40AO75400 957 aaKnown RBP25.41■■□□□ 1.66
SCARB2-212ENST00000638663 PDE4BQ07343 736 aa25.41■■□□□ 1.66
SCARB2-212ENST00000638663 STRIP1Q5VSL9 837 aa25.41■■□□□ 1.66
SCARB2-212ENST00000638663 AMOTL1Q8IY63 956 aa25.41■■□□□ 1.66
SCARB2-212ENST00000638663 TNKSO95271 1327 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms