RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 HAUS2Q9NVX0 235 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 KLF18A0A0U1RQI7 1052 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 SEL1L2Q5TEA6 688 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 RMDN2Q96LZ7 410 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 SNRPA1P09661 255 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 TCEANC2Q96MN5 208 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 NCAPGQ9BPX3 1015 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 NYXQ9GZU5 481 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 RASSF4Q9H2L5 321 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 TTC21BQ7Z4L5 1316 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 MUM1L1Q5H9M0 696 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 MAGED2Q9UNF1 606 aaPredicted RBP18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 CCDC171Q6TFL3 1326 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 GBP1P32455 592 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 MKRN3Q13064 507 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 WDR48Q8TAF3 677 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 SLC12A1Q13621 1099 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 TBC1D9Q6ZT07 1266 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 AOPEPQ8N6M6 819 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 IQGAP2Q13576 1575 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 NR1I2O75469 434 aa18.21■□□□□ 0.51
CACNA1A-258ENST00000638029 SPOPO43791 374 aa18.21■□□□□ 0.5
CACNA1A-258ENST00000638029 CUL7Q14999 1698 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 TNPO1Q92973 898 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 SPECC1L-ADORA2AF8WAN1 911 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 DDB1Q16531 1140 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 ANKRD35Q8N283 1001 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 GNPATO15228 680 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 PDZD8Q8NEN9 1154 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 SPDYE1Q8NFV5 336 aaPredicted RBP18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 ZMAT2Q96NC0 199 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 RAD51AP2Q09MP3 1159 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 MICAL1Q8TDZ2 1067 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 KIFAP3Q92845 792 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 LMCD1Q9NZU5 365 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 TBC1D7Q9P0N9 293 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 LDHBP07195 334 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 CABLES1Q8TDN4 633 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 SMTNP53814 917 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 ANKRD13DQ6ZTN6 518 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 STK38LQ9Y2H1 464 aa18.2■□□□□ 0.5
CACNA1A-258ENST00000638029 BRD3Q15059 726 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 RBBP5Q15291 538 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 CDAN1Q8IWY9 1227 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 ANKRD24Q8TF21 1146 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 WASLO00401 505 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 SYNDIG1Q9H7V2 258 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 SYNDIG1LA6NDD5 238 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 EMILIN1Q9Y6C2 1016 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 MAP7Q14244 749 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 GNAQP50148 359 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 FAM180AQ6UWF9 173 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 FYB2Q5VWT5 728 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 MOSPD1Q9UJG1 213 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 DMRT2Q9Y5R5 561 aa18.19■□□□□ 0.5
CACNA1A-258ENST00000638029 CETN3O15182 167 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 SLC39A6Q13433 755 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 CEP128Q6ZU80 1094 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 ZBTB41Q5SVQ8 909 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 TSPYL2Q9H2G4 693 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 STK32BQ9NY57 414 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 ABT1Q9ULW3 272 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 PPFIBP2Q8ND30 876 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 AZI2Q9H6S1 392 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 ZNF467Q7Z7K2 595 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 RAB3IPQ96QF0 476 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 APOL6Q9BWW8 343 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 BCS1LQ9Y276 419 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 LUC7L2Q9Y383 392 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 BMP15O95972 392 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 SLC12A2P55011 1212 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 AFAP1L2Q8N4X5 818 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 KCNG4Q8TDN1 519 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 NKIRAS1Q9NYS0 192 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 CD109Q6YHK3 1445 aa18.18■□□□□ 0.5
CACNA1A-258ENST00000638029 PSMA7O14818 248 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 XPAP23025 273 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 LARGE2Q8N3Y3 721 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 LMBR1Q8WVP7 490 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 TRIM27P14373 513 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 NUCKS1Q9H1E3 243 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 A0A1B0GUA9 196 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 SPDL1Q96EA4 605 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 MTRF1LQ9UGC7 380 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 KRT2P35908 639 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 SCYL1Q96KG9 808 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 PRIMPOLQ96LW4 560 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 ARAP1Q96P48 1450 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 SYT1P21579 422 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 NBPF11Q86T75 865 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 MCUR1Q96AQ8 359 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 MMS19Q96T76 1030 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 ST7Q9NRC1 585 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 POLIQ9UNA4 740 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 CAPN9O14815 690 aa18.17■□□□□ 0.5
CACNA1A-258ENST00000638029 TBC1D8O95759 1140 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms