RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	SLC9C2	Q5TAH2	1124 aa		18.28	■□□□□ 0.52
CACNA1A-238	ENST00000637276	BUB1B	O60566	1050 aa	Predicted RBP	18.27	■□□□□ 0.52
CACNA1A-238	ENST00000637276	KRT2	P35908	639 aa		18.27	■□□□□ 0.52
CACNA1A-238	ENST00000637276	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.27	■□□□□ 0.52
CACNA1A-238	ENST00000637276	VPS16	Q9H269	839 aa		18.27	■□□□□ 0.52
CACNA1A-238	ENST00000637276	ECHDC1	Q9NTX5	307 aa		18.27	■□□□□ 0.52
CACNA1A-238	ENST00000637276	KAZN	Q674X7	775 aa		18.27	■□□□□ 0.52
CACNA1A-238	ENST00000637276	TMX3	Q96JJ7	454 aa		18.27	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CD19	P15391	556 aa		18.27	■□□□□ 0.52
CACNA1A-238	ENST00000637276	CALML3	P27482	149 aa		18.27	■□□□□ 0.52
CACNA1A-238	ENST00000637276	ANKRD42	Q8N9B4	389 aa		18.27	■□□□□ 0.52
CACNA1A-238	ENST00000637276	ARHGAP44	Q17R89	818 aa		18.27	■□□□□ 0.51
CACNA1A-238	ENST00000637276	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	18.27	■□□□□ 0.51
CACNA1A-238	ENST00000637276	RMND1	Q9NWS8	449 aa		18.27	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ZSCAN22	P10073	491 aa	Predicted RBP	18.27	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ATP11A	P98196	1134 aa		18.27	■□□□□ 0.51
CACNA1A-238	ENST00000637276	MSANTD4	Q8NCY6	345 aa		18.27	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ARFGAP3	Q9NP61	516 aa		18.27	■□□□□ 0.51
CACNA1A-238	ENST00000637276	POLI	Q9UNA4	740 aa		18.27	■□□□□ 0.51
CACNA1A-238	ENST00000637276	SYT10	Q6XYQ8	523 aa		18.26	■□□□□ 0.51
CACNA1A-238	ENST00000637276	DYM	Q7RTS9	669 aa		18.26	■□□□□ 0.51
CACNA1A-238	ENST00000637276	KLHL7	Q8IXQ5	586 aa		18.26	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ZBBX	A8MT70	800 aa		18.26	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ZBTB33	Q86T24	672 aa		18.26	■□□□□ 0.51
CACNA1A-238	ENST00000637276	UBN1	Q9NPG3	1134 aa		18.26	■□□□□ 0.51
CACNA1A-238	ENST00000637276	TNFAIP3	P21580	790 aa		18.26	■□□□□ 0.51
CACNA1A-238	ENST00000637276	CCDC157	Q569K6	752 aa		18.26	■□□□□ 0.51
CACNA1A-238	ENST00000637276	C9orf84	Q5VXU9	1444 aa		18.26	■□□□□ 0.51
CACNA1A-238	ENST00000637276	KANK3	Q6NY19	840 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	CCDC125	Q86Z20	511 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	GDAP1L1	Q96MZ0	367 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	VPS41	P49754	854 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	DACT1	Q9NYF0	836 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	TRAF5	O00463	557 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	KRT33B	Q14525	404 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NELFCD	Q8IXH7	590 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	CCDC42	Q96M95	316 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	FAM193B	Q96PV7	902 aa	Predicted RBP	18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	TRIM56	Q9BRZ2	755 aa	Known RBP	18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	PDE6A	P16499	860 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ALDH3A1	P30838	453 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	SULF1	Q8IWU6	871 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	UHMK1	Q8TAS1	419 aa	Known RBP	18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NKTR	P30414	1462 aa	Known RBP	18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	HABP4	Q5JVS0	413 aa	Known RBP	18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	KRT79	Q5XKE5	535 aa		18.25	■□□□□ 0.51
CACNA1A-238	ENST00000637276	PLEKHH1	Q9ULM0	1364 aa		18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	PRPH	P41219	470 aa		18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	EFCC1	Q9HA90	598 aa		18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	HPS4	Q9NQG7	708 aa		18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	RTL1	A6NKG5	1358 aa		18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NOLC1	Q14978	699 aa	Known RBP eCLIP	18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	SLC12A2	P55011	1212 aa		18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NLRP3	Q96P20	1036 aa		18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	STK24	Q9Y6E0	443 aa		18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	RBM46	Q8TBY0	533 aa	Known RBP	18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	PAXBP1	Q9Y5B6	917 aa		18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	HNRNPCL2	B2RXH8	293 aa		18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	HNRNPCL1	O60812	293 aa	Known RBP	18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	STK10	O94804	968 aa	Known RBP	18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	TTC22	Q5TAA0	569 aa		18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	RBM8A	Q9Y5S9	174 aa	Known RBP	18.24	■□□□□ 0.51
CACNA1A-238	ENST00000637276	IVL	P07476	585 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	JADE1	Q6IE81	842 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	KRT222	Q8N1A0	295 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	HS2ST1	Q7LGA3	356 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ANKRD24	Q8TF21	1146 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	HELLS	Q9NRZ9	838 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	TBC1D12	O60347	775 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	YARS	P54577	528 aa	Known RBP	18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	CARD10	Q9BWT7	1032 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ZCWPW1	Q9H0M4	648 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	EPB41	P11171	864 aa	Known RBP	18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	DCUN1D2	Q6PH85	259 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	IFNK	Q9P0W0	207 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ARHGAP42	A6NI28	874 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	PSMA7	O14818	248 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ZNF853	P0CG23	659 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	MBIP	Q9NS73	344 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	AMOTL2	Q9Y2J4	779 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	TXK	P42681	527 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	MCUR1	Q96AQ8	359 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	LRRC27	Q9C0I9	530 aa		18.23	■□□□□ 0.51
CACNA1A-238	ENST00000637276	SDS	P20132	328 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NBPF14	Q5TI25	921 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NKIRAS1	Q9NYS0	192 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	CALCOCO2	Q13137	446 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	CETN3	O15182	167 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	GNPAT	O15228	680 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	KRT81	Q14533	505 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	DDX12P	Q92771	950 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	POLK	Q9UBT6	870 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	FYB2	Q5VWT5	728 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	HDAC11	Q96DB2	347 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NUB1	Q9Y5A7	615 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	NEMF	O60524	1076 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	ANGPTL8	Q6UXH0	198 aa		18.22	■□□□□ 0.51
CACNA1A-238	ENST00000637276	CTAGE3P	Q8IX95	158 aa		18.22	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms