RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 FBXO33Q7Z6M2 555 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 SLC16A10Q8TF71 515 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 TMEM87BQ96K49 555 aa8.37□□□□□ -1.07
BRCA1-230ENST00000634433 DNM1Q05193 864 aaKnown RBP8.36□□□□□ -1.07
BRCA1-230ENST00000634433 ATL3Q6DD88 541 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 DPH6Q7L8W6 267 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 IFNL3Q8IZI9 196 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 NSUN7Q8NE18 718 aaKnown RBP8.36□□□□□ -1.07
BRCA1-230ENST00000634433 CELF1Q92879 486 aaKnown RBP8.36□□□□□ -1.07
BRCA1-230ENST00000634433 SYT17Q9BSW7 474 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 KRT23Q9C075 422 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 RNF41Q9H4P4 317 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-230ENST00000634433 LY75O60449 1722 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 ELP1O95163 1332 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 PTPDC1A2A3K4 754 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 ZNF16P17020 682 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-230ENST00000634433 CYP7A1P22680 504 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 CCDC183Q5T5S1 534 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 CPLX2Q6PUV4 134 aaKnown RBP8.36□□□□□ -1.07
BRCA1-230ENST00000634433 GAS2L3Q86XJ1 694 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 PARP9Q8IXQ6 854 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 FAM84BQ96KN1 310 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-230ENST00000634433 SGIP1Q9BQI5 828 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 MTA3Q9BTC8 594 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 RAI14Q9P0K7 980 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 TMEM63CQ9P1W3 806 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 CFAP45Q9UL16 551 aa8.36□□□□□ -1.07
BRCA1-230ENST00000634433 A0A0G2JLW4 131 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 KLF18A0A0U1RQI7 1052 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 FIBPO43427 364 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 JAK2O60674 1132 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 HIBADHP31937 336 aaKnown RBP8.35□□□□□ -1.07
BRCA1-230ENST00000634433 GYG1P46976 350 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 TDO2P48775 406 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 CCT2P78371 535 aaKnown RBP8.35□□□□□ -1.07
BRCA1-230ENST00000634433 CDC37L1Q7L3B6 337 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 CNBD1Q8NA66 436 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 CHAMP1Q96JM3 812 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 GDPD2Q9HCC8 539 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 ANGEL1Q9UNK9 670 aaKnown RBP8.35□□□□□ -1.07
BRCA1-230ENST00000634433 LEMD3Q9Y2U8 911 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 SLC4A4Q9Y6R1 1079 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 C4BP0C0L5 1744 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 MAGEB6P1A0A0J9YX57 407 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 GOLGA6L4A6NEF3 574 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 POM121CA8CG34 1229 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 GSG1L2A8MUP6 293 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 CPLX1O14810 134 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 GADD45BO75293 160 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-230ENST00000634433 CDKL5O76039 1030 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 ST5P78524 1137 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 GRAPQ13588 217 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 SART3Q15020 963 aaKnown RBP8.35□□□□□ -1.07
BRCA1-230ENST00000634433 SLC15A2Q16348 729 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 CHST3Q7LGC8 479 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 GRAPLQ8TC17 118 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-230ENST00000634433 DDX11Q96FC9 970 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 ARMT1Q9H993 441 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 ABCF2Q9UG63 623 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 LAMA4Q16363 1823 aa8.35□□□□□ -1.07
BRCA1-230ENST00000634433 GOLGA8BA8MQT2 603 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 TM4SF1P30408 202 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 NASPP49321 788 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-230ENST00000634433 NFIXQ14938 502 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 AKNAD1Q5T1N1 836 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 SYNE3Q6ZMZ3 975 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 MFSD6Q6ZSS7 791 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 SMIM5Q71RC9 77 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 ZNF396Q96N95 335 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-230ENST00000634433 TAF1LQ8IZX4 1826 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 DOCK2Q92608 1830 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.34□□□□□ -1.07
BRCA1-230ENST00000634433 GRIN3BO60391 1043 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 KIF4AO95239 1232 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 CTDNEP1O95476 244 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 ANTXR2P58335 489 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 KCNA1Q09470 495 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 RESTQ13127 1097 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 FERMT3Q86UX7 667 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 STAG1Q8WVM7 1258 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 LRRC4BQ9NT99 713 aa8.34□□□□□ -1.07
BRCA1-230ENST00000634433 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.07
BRCA1-230ENST00000634433 SALL1Q9NSC2 1324 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 ERICH2A1L162 156 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 SYCE3A1L190 88 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 SH2B2O14492 632 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-230ENST00000634433 PCP11498 1178 aaKnown RBP8.33□□□□□ -1.08
BRCA1-230ENST00000634433 LIFRP42702 1097 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 TBC1D10CQ8IV04 446 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 GPIHBP1Q8IV16 184 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 LCORLQ8N3X6 602 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 RPGRQ92834 1020 aaKnown RBP8.33□□□□□ -1.08
BRCA1-230ENST00000634433 RBM17Q96I25 401 aaKnown RBP8.33□□□□□ -1.08
BRCA1-230ENST00000634433 TSPY26PQ9H489 355 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 METAP2P50579 478 aaKnown RBP eCLIP8.33□□□□□ -1.08
BRCA1-230ENST00000634433 TMEM67Q5HYA8 995 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 NFXL1Q6ZNB6 911 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 SGMS1Q86VZ5 419 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 BRIP1Q9BX63 1249 aa8.33□□□□□ -1.08
BRCA1-230ENST00000634433 FHDC1Q9C0D6 1143 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms