RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 RBSNQ9H1K0 784 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 CAPN10Q9HC96 672 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 SPTLC3Q9NUV7 552 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 DDX41Q9UJV9 622 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 PAIP2BQ9ULR5 123 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 TRIM35Q9UPQ4 493 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 EHBP1L1Q8N3D4 1523 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 USP34Q70CQ2 3546 aa4.41□□□□□ -1.7
R3HDM1-220ENST00000628915 ARPC4P59998 168 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 MRPS35P82673 323 aaKnown RBP4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 INAQ16352 499 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 EFCAB2Q5VUJ9 269 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 TMC6Q7Z403 805 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 NOP9Q86U38 636 aaKnown RBP4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 KIAA1958Q8N8K9 716 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 FAM107BQ9H098 131 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 SCUBE2Q9NQ36 999 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 KCTD5Q9NXV2 234 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 SSX2IPQ9Y2D8 614 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.4□□□□□ -1.71e-6■■■□□ 16.9
R3HDM1-220ENST00000628915 IQGAP3Q86VI3 1631 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 NPC1L1Q9UHC9 1359 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 CCDC85CA6NKD9 419 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 CTIFO43310 598 aaKnown RBP4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 NEK2P51955 445 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 BNIP1Q12981 228 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 STK3Q13188 491 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 TTC39AQ5SRH9 613 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 DSTYKQ6XUX3 929 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 MSANTD4Q8NCY6 345 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 LSM14AQ8ND56 463 aaKnown RBP4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 KIAA1524Q8TCG1 905 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 PPP1R14BQ96C90 147 aa4.4□□□□□ -1.7
R3HDM1-220ENST00000628915 ABCA6Q8N139 1617 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 FRMD3A2A2Y4 597 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 GOLGA6L4A6NEF3 574 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 TRIM64A6NGJ6 449 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 TRIM64BA6NI03 449 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 CYP11B2P19099 503 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 AKAP17AQ02040 695 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 IQCB1Q15051 598 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 PLCB4Q15147 1175 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 TCEAL1Q15170 157 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 ANKRD45Q5TZF3 282 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 CCDC121Q6ZUS5 278 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 NCAPG2Q86XI2 1143 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 JARID2Q92833 1246 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 SAAL1Q96ER3 474 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 OSBPL10Q9BXB5 764 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 MUC3BQ9H195 1237 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 CCDC68Q9H2F9 335 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 TSPY26PQ9H489 355 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 RPRD2Q5VT52 1461 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 BOLA2-SMG1P6H3BVE0 249 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 BIN1O00499 593 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 CPLX1O14810 134 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 LSM1O15116 133 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 MUSKO15146 869 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 IVLP07476 585 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 MCM2P49736 904 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 CLCN2P51788 898 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 TPD52P55327 224 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 CAPRIN2Q6IMN6 1127 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 CEP128Q6ZU80 1094 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 MPHOSPH9Q99550 1183 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 MMADHCQ9H3L0 296 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 TBC1D7Q9P0N9 293 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 SCHIP1Q9P0W5 487 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 POLG2Q9UHN1 485 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 CTNNA3Q9UI47 895 aa4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 MRPL42Q9Y6G3 142 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-220ENST00000628915 NPATQ14207 1427 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 CASKIN1Q8WXD9 1431 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 PLEKHH1Q9ULM0 1364 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 ZMYND10O75800 440 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 MYL1P05976 194 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 ZNF24P17028 368 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 COX10Q12887 443 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 LAMB3Q13751 1172 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 RAPGEF1Q13905 1077 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 TTLL12Q14166 644 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 DCTN1Q14203 1278 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 B4GALNT2Q8NHY0 566 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 IPCEF1Q8WWN9 437 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 ARHGEF2Q92974 986 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 PHACTR1Q9C0D0 580 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 DKK3Q9UBP4 350 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 RTEL1-TNFRSF6BF6WH68 1400 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 SPAG9O60271 1321 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 ATP10BO94823 1461 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 PARD3Q8TEW0 1356 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 K7ELQ4 463 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 TUBA1BP68363 451 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 PIP4K2BP78356 416 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 RASSF7Q02833 373 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 NSUN2Q08J23 767 aaKnown RBP eCLIP4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 MPP3Q13368 585 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 EIF4A2Q14240 407 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 C10orf76Q5T2E6 689 aa4.39□□□□□ -1.71
R3HDM1-220ENST00000628915 TUBA1AQ71U36 451 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms