RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 IFNL3Q8IZI9 196 aa22.13■■□□□ 1.13
PTBP1-220ENST00000627714 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.13■■□□□ 1.13
PTBP1-220ENST00000627714 CCP110O43303 1012 aa22.12■■□□□ 1.13
PTBP1-220ENST00000627714 FMNL1O95466 1100 aaPredicted RBP22.12■■□□□ 1.13
PTBP1-220ENST00000627714 FANCCQ00597 558 aa22.12■■□□□ 1.13
PTBP1-220ENST00000627714 MYL5Q02045 173 aa22.12■■□□□ 1.13
PTBP1-220ENST00000627714 HOOK1Q9UJC3 728 aaKnown RBP22.12■■□□□ 1.13
PTBP1-220ENST00000627714 ZBTB1Q9Y2K1 713 aa22.12■■□□□ 1.13
PTBP1-220ENST00000627714 DISP2A7MBM2 1401 aa22.12■■□□□ 1.13
PTBP1-220ENST00000627714 NHSL1Q5SYE7 1610 aa22.12■■□□□ 1.13
PTBP1-220ENST00000627714 IFNAR1P17181 557 aa22.12■■□□□ 1.13
PTBP1-220ENST00000627714 ZNF34Q8IZ26 560 aa22.12■■□□□ 1.13
PTBP1-220ENST00000627714 FAM217BQ9NTX9 383 aaPredicted RBP22.12■■□□□ 1.13
PTBP1-220ENST00000627714 IFIT3O14879 490 aaKnown RBP22.11■■□□□ 1.13
PTBP1-220ENST00000627714 RANBP6O60518 1105 aaKnown RBP22.11■■□□□ 1.13
PTBP1-220ENST00000627714 RXRAP19793 462 aa22.11■■□□□ 1.13
PTBP1-220ENST00000627714 SART3Q15020 963 aaKnown RBP22.11■■□□□ 1.13
PTBP1-220ENST00000627714 AKNAD1Q5T1N1 836 aa22.11■■□□□ 1.13
PTBP1-220ENST00000627714 ARMCX5Q6P1M9 558 aa22.11■■□□□ 1.13
PTBP1-220ENST00000627714 DZIP3Q86Y13 1208 aaKnown RBP22.11■■□□□ 1.13
PTBP1-220ENST00000627714 ERO1AQ96HE7 468 aa22.11■■□□□ 1.13
PTBP1-220ENST00000627714 TRMT1Q9NXH9 659 aaKnown RBP22.11■■□□□ 1.13
PTBP1-220ENST00000627714 RCAN1P53805 252 aa22.11■■□□□ 1.13
PTBP1-220ENST00000627714 SAFBQ15424 915 aaKnown RBP eCLIP22.11■■□□□ 1.13
PTBP1-220ENST00000627714 OLFM4Q6UX06 510 aa22.11■■□□□ 1.13
PTBP1-220ENST00000627714 NKX2-3Q8TAU0 364 aa22.11■■□□□ 1.13
PTBP1-220ENST00000627714 NACAP1Q9BZK3 213 aa22.11■■□□□ 1.13
PTBP1-220ENST00000627714 SENP2Q9HC62 589 aa22.11■■□□□ 1.13
PTBP1-220ENST00000627714 EPB41L4AQ9HCS5 686 aaPredicted RBP22.11■■□□□ 1.13
PTBP1-220ENST00000627714 MBD4O95243 580 aa22.1■■□□□ 1.13
PTBP1-220ENST00000627714 CBX1P83916 185 aa22.1■■□□□ 1.13
PTBP1-220ENST00000627714 NOSTRINQ8IVI9 506 aa22.1■■□□□ 1.13
PTBP1-220ENST00000627714 MAGEB6Q8N7X4 407 aa22.1■■□□□ 1.13
PTBP1-220ENST00000627714 SLC4A9Q96Q91 983 aa22.1■■□□□ 1.13
PTBP1-220ENST00000627714 NOL10Q9BSC4 688 aaKnown RBP22.1■■□□□ 1.13
PTBP1-220ENST00000627714 ZSWIM5Q9P217 1185 aa22.1■■□□□ 1.13
PTBP1-220ENST00000627714 PNPLA7Q6ZV29 1317 aa22.1■■□□□ 1.13
PTBP1-220ENST00000627714 UTP14CQ5TAP6 766 aaKnown RBP22.1■■□□□ 1.13
PTBP1-220ENST00000627714 E4F1Q66K89 784 aaPredicted RBP22.1■■□□□ 1.13
PTBP1-220ENST00000627714 MFSD6Q6ZSS7 791 aa22.1■■□□□ 1.13
PTBP1-220ENST00000627714 TRIM22Q8IYM9 498 aa22.1■■□□□ 1.13
PTBP1-220ENST00000627714 KRI1Q8N9T8 703 aaKnown RBP22.1■■□□□ 1.13
PTBP1-220ENST00000627714 SLC26A6Q9BXS9 759 aa22.1■■□□□ 1.13
PTBP1-220ENST00000627714 LMOD1P29536 600 aaPredicted RBP22.09■■□□□ 1.13
PTBP1-220ENST00000627714 KRBA2Q6ZNG9 492 aa22.09■■□□□ 1.13
PTBP1-220ENST00000627714 TMTC2Q8N394 836 aa22.09■■□□□ 1.13
PTBP1-220ENST00000627714 STAG1Q8WVM7 1258 aa22.09■■□□□ 1.13
PTBP1-220ENST00000627714 OGFRQ9NZT2 677 aa22.09■■□□□ 1.13
PTBP1-220ENST00000627714 KCNH3Q9ULD8 1083 aa22.09■■□□□ 1.13
PTBP1-220ENST00000627714 CCDC196A0A1B0GTZ2 297 aa22.08■■□□□ 1.13
PTBP1-220ENST00000627714 RASGRF1Q13972 1273 aa22.08■■□□□ 1.13
PTBP1-220ENST00000627714 CNNM3Q8NE01 707 aa22.08■■□□□ 1.13
PTBP1-220ENST00000627714 PPP1R13BQ96KQ4 1090 aa22.08■■□□□ 1.13
PTBP1-220ENST00000627714 PLCH1Q4KWH8 1693 aa22.08■■□□□ 1.13
PTBP1-220ENST00000627714 MMP1P03956 469 aa22.08■■□□□ 1.13
PTBP1-220ENST00000627714 HSPA2P54652 639 aa22.08■■□□□ 1.13
PTBP1-220ENST00000627714 HSD3B7Q9H2F3 369 aa22.08■■□□□ 1.13
PTBP1-220ENST00000627714 FOXP1Q9H334 677 aaPredicted RBP22.08■■□□□ 1.13
PTBP1-220ENST00000627714 GSG1L2A8MUP6 293 aa22.07■■□□□ 1.12
PTBP1-220ENST00000627714 SLU7O95391 586 aaKnown RBP22.07■■□□□ 1.12
PTBP1-220ENST00000627714 UBASH3AP57075 661 aa22.07■■□□□ 1.12
PTBP1-220ENST00000627714 RILPL1Q5EBL4 403 aa22.07■■□□□ 1.12
PTBP1-220ENST00000627714 MPHOSPH8Q99549 860 aa22.07■■□□□ 1.12
PTBP1-220ENST00000627714 ERICH2A1L162 156 aa22.07■■□□□ 1.12
PTBP1-220ENST00000627714 CTDSPL2Q05D32 466 aa22.07■■□□□ 1.12
PTBP1-220ENST00000627714 PNOCQ13519 176 aa22.07■■□□□ 1.12
PTBP1-220ENST00000627714 METTL16Q86W50 562 aaKnown RBP22.07■■□□□ 1.12
PTBP1-220ENST00000627714 GTPBP4Q9BZE4 634 aaKnown RBP22.07■■□□□ 1.12
PTBP1-220ENST00000627714 RNF41Q9H4P4 317 aaPredicted RBP22.07■■□□□ 1.12
PTBP1-220ENST00000627714 BTG4Q9NY30 223 aa22.07■■□□□ 1.12
PTBP1-220ENST00000627714 ZNF215Q9UL58 517 aaPredicted RBP22.07■■□□□ 1.12
PTBP1-220ENST00000627714 SERPINC1P01008 464 aa22.06■■□□□ 1.12
PTBP1-220ENST00000627714 DMTNQ08495 405 aa22.06■■□□□ 1.12
PTBP1-220ENST00000627714 RTN1Q16799 776 aa22.06■■□□□ 1.12
PTBP1-220ENST00000627714 ZNF397Q8NF99 534 aaPredicted RBP22.06■■□□□ 1.12
PTBP1-220ENST00000627714 MYL10Q9BUA6 226 aa22.06■■□□□ 1.12
PTBP1-220ENST00000627714 ARMT1Q9H993 441 aa22.06■■□□□ 1.12
PTBP1-220ENST00000627714 BCORQ6W2J9 1755 aa22.06■■□□□ 1.12
PTBP1-220ENST00000627714 ZSCAN20P17040 1043 aaPredicted RBP22.06■■□□□ 1.12
PTBP1-220ENST00000627714 WTAPQ15007 396 aa22.06■■□□□ 1.12
PTBP1-220ENST00000627714 PKNOX2Q96KN3 472 aa22.06■■□□□ 1.12
PTBP1-220ENST00000627714 CLIC6Q96NY7 704 aa22.06■■□□□ 1.12
PTBP1-220ENST00000627714 L2HGDHQ9H9P8 463 aa22.06■■□□□ 1.12
PTBP1-220ENST00000627714 RTL9Q8NET4 1388 aa22.05■■□□□ 1.12
PTBP1-220ENST00000627714 DEXIO95424 95 aa22.05■■□□□ 1.12
PTBP1-220ENST00000627714 TDO2P48775 406 aa22.05■■□□□ 1.12
PTBP1-220ENST00000627714 LONRF3Q496Y0 759 aa22.05■■□□□ 1.12
PTBP1-220ENST00000627714 HELBQ8NG08 1087 aaPredicted RBP22.05■■□□□ 1.12
PTBP1-220ENST00000627714 DACH1Q9UI36 760 aa22.05■■□□□ 1.12
PTBP1-220ENST00000627714 COL14A1Q05707 1796 aaKnown RBP22.05■■□□□ 1.12
PTBP1-220ENST00000627714 ATP1A3P13637 1013 aa22.04■■□□□ 1.12
PTBP1-220ENST00000627714 PPP2R5BQ15173 497 aa22.04■■□□□ 1.12
PTBP1-220ENST00000627714 DIS3L2Q8IYB7 885 aaKnown RBP22.04■■□□□ 1.12
PTBP1-220ENST00000627714 ZNF579Q8NAF0 562 aaKnown RBP22.04■■□□□ 1.12
PTBP1-220ENST00000627714 CEP131Q9UPN4 1083 aa22.04■■□□□ 1.12
PTBP1-220ENST00000627714 ISM2Q6H9L7 571 aa22.04■■□□□ 1.12
PTBP1-220ENST00000627714 FCHSD1Q86WN1 690 aa22.04■■□□□ 1.12
PTBP1-220ENST00000627714 PCDHA5Q9Y5H7 936 aa22.04■■□□□ 1.12
PTBP1-220ENST00000627714 PTPREP23469 700 aa22.03■■□□□ 1.12
PTBP1-220ENST00000627714 CFAP100Q494V2 611 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms