RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.74□□□□□ -1.33
EBF1-211ENST00000622875 PPP1R12BO60237 982 aaPredicted RBP6.74□□□□□ -1.33
EBF1-211ENST00000622875 U2AF1L5P0DN76 240 aaPredicted RBP6.74□□□□□ -1.33
EBF1-211ENST00000622875 IREB2P48200 963 aaKnown RBP6.74□□□□□ -1.33
EBF1-211ENST00000622875 U2AF1Q01081 240 aaKnown RBP eCLIP6.74□□□□□ -1.33
EBF1-211ENST00000622875 PDE3AQ14432 1141 aa6.74□□□□□ -1.33
EBF1-211ENST00000622875 PRAMEF18Q5VWM3 479 aa6.74□□□□□ -1.33
EBF1-211ENST00000622875 FAM177A1Q8N128 213 aaPredicted RBP6.74□□□□□ -1.33
EBF1-211ENST00000622875 TIFAQ96CG3 184 aa6.74□□□□□ -1.33
EBF1-211ENST00000622875 EIF3JO75822 258 aaKnown RBP6.74□□□□□ -1.33
EBF1-211ENST00000622875 KCNJ4P48050 445 aa6.74□□□□□ -1.33
EBF1-211ENST00000622875 CHD6Q8TD26 2715 aa6.74□□□□□ -1.33
EBF1-211ENST00000622875 ERCC3P19447 782 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 WASHC4Q2M389 1173 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 OPTNQ96CV9 577 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 ZKSCAN8Q15776 578 aaPredicted RBP6.73□□□□□ -1.33
EBF1-211ENST00000622875 EYA3Q99504 573 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 CCDC94Q9BW85 323 aaPredicted RBP6.73□□□□□ -1.33
EBF1-211ENST00000622875 EMILIN1Q9Y6C2 1016 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 CDH23Q9H251 3354 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 KDM4AO75164 1064 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 FMNL1O95466 1100 aaPredicted RBP6.73□□□□□ -1.33
EBF1-211ENST00000622875 BCRP11274 1271 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 NUBP1P53384 320 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 KIAA1211Q6ZU35 1233 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 CD320Q9NPF0 282 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 SPTBN4Q9H254 2564 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 GOLGA6L19H0YKK7 550 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 RNMTO43148 476 aaKnown RBP6.73□□□□□ -1.33
EBF1-211ENST00000622875 IPO7O95373 1038 aaKnown RBP6.73□□□□□ -1.33
EBF1-211ENST00000622875 EIF4A2Q14240 407 aaKnown RBP6.73□□□□□ -1.33
EBF1-211ENST00000622875 SPTY2D1Q68D10 685 aaPredicted RBP6.73□□□□□ -1.33
EBF1-211ENST00000622875 RPAINQ86UA6 219 aa6.73□□□□□ -1.33
EBF1-211ENST00000622875 USP2O75604 605 aaPredicted RBP6.72□□□□□ -1.33
EBF1-211ENST00000622875 CETPP11597 493 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 DBNDD1Q9H9R9 158 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 GABRQQ9UN88 632 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 CEP83Q9Y592 693 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 VGLL3A8MV65 326 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 NBPF26B4DH59 902 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 WNT10BO00744 389 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 TFF2Q03403 129 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 SLC39A6Q13433 755 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 ANKRD23Q86SG2 305 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 TMC1Q8TDI8 760 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 GAKO14976 1311 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 EPG5Q9HCE0 2579 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 GOLGA6L10A6NI86 522 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 ERVV-1B6SEH8 477 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 OTUD6BQ8N6M0 293 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.72□□□□□ -1.33
EBF1-211ENST00000622875 KCNQ5Q9NR82 932 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 SMC4Q9NTJ3 1288 aa6.72□□□□□ -1.33
EBF1-211ENST00000622875 CFAP54Q96N23 3096 aa6.71□□□□□ -1.33
EBF1-211ENST00000622875 MAP3K21Q5TCX8 1036 aa6.71□□□□□ -1.33
EBF1-211ENST00000622875 RINLQ6ZS11 566 aa6.71□□□□□ -1.33
EBF1-211ENST00000622875 ZBTB38Q8NAP3 1195 aaPredicted RBP6.71□□□□□ -1.33
EBF1-211ENST00000622875 ATRXP46100 2492 aa6.71□□□□□ -1.33
EBF1-211ENST00000622875 SOBPA7XYQ1 873 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 NTSR2O95665 410 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 SLC20A2Q08357 652 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 GIMAP7Q8NHV1 300 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 FBXW7Q969H0 707 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 MYO3BQ8WXR4 1341 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 PRR23AA6NEV1 266 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 BTBD19C9JJ37 291 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 GRAPQ13588 217 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 ZRSR1Q15695 479 aaKnown RBP6.71□□□□□ -1.34
EBF1-211ENST00000622875 SUPT20HL1Q3ZLR7 823 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 HSP90B2PQ58FF3 399 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 C3orf67Q6ZVT6 689 aa6.71□□□□□ -1.34
EBF1-211ENST00000622875 GRAPLQ8TC17 118 aaPredicted RBP6.71□□□□□ -1.34
EBF1-211ENST00000622875 FRAT1Q92837 279 aaPredicted RBP6.71□□□□□ -1.34
EBF1-211ENST00000622875 PRDM16Q9HAZ2 1276 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 DIAPH3Q9NSV4 1193 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 CPSF2Q9P2I0 782 aaKnown RBP6.7□□□□□ -1.34
EBF1-211ENST00000622875 RPAP1Q9BWH6 1393 aaPredicted RBP6.7□□□□□ -1.34
EBF1-211ENST00000622875 PHIPQ8WWQ0 1821 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 COL4A3Q01955 1670 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 DCHS1Q96JQ0 3298 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 DCXO43602 365 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 HMGCRP04035 888 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 SH3BGRP55822 239 aaPredicted RBP6.7□□□□□ -1.34
EBF1-211ENST00000622875 ZKSCAN4Q969J2 545 aaPredicted RBP6.7□□□□□ -1.34
EBF1-211ENST00000622875 CHD8Q9HCK8 2581 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 A1BGP04217 495 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 RASIP1Q5U651 963 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 PPM1EQ8WY54 764 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 SYAP1Q96A49 352 aaPredicted RBP6.7□□□□□ -1.34
EBF1-211ENST00000622875 PRDM12Q9H4Q4 367 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 CCDC181Q5TID7 509 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 MIPOL1Q8TD10 442 aa6.7□□□□□ -1.34
EBF1-211ENST00000622875 COL4A4P53420 1690 aaPredicted RBP6.69□□□□□ -1.34
EBF1-211ENST00000622875 SPDYE5A6NIY4 337 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 CCDC172P0C7W6 258 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 TRDNQ13061 729 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 NEUROD2Q15784 382 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 RMDN2Q96LZ7 410 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 FAM107BQ9H098 131 aa6.69□□□□□ -1.34
EBF1-211ENST00000622875 GGNBP2Q9H3C7 697 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms