RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MTMR6Q9Y217 621 aa25.2■■□□□ 1.63
SPAST-204ENST00000621856 TRAK2O60296 914 aa25.2■■□□□ 1.62
SPAST-204ENST00000621856 SART3Q15020 963 aaKnown RBP25.2■■□□□ 1.62
SPAST-204ENST00000621856 NFXL1Q6ZNB6 911 aa25.2■■□□□ 1.62
SPAST-204ENST00000621856 FAM184AQ8NB25 1140 aa25.2■■□□□ 1.62
SPAST-204ENST00000621856 SMARCC2Q8TAQ2 1214 aa25.2■■□□□ 1.62
SPAST-204ENST00000621856 IGDCC4Q8TDY8 1250 aa25.2■■□□□ 1.62
SPAST-204ENST00000621856 C7orf43Q8WVR3 580 aa25.2■■□□□ 1.62
SPAST-204ENST00000621856 DDX11Q96FC9 970 aa25.2■■□□□ 1.62
SPAST-204ENST00000621856 SUGT1Q9Y2Z0 365 aa25.2■■□□□ 1.62
SPAST-204ENST00000621856 NAV1Q8NEY1 1877 aa25.19■■□□□ 1.62
SPAST-204ENST00000621856 F13A1P00488 732 aa25.19■■□□□ 1.62
SPAST-204ENST00000621856 ESR2Q92731 530 aa25.19■■□□□ 1.62
SPAST-204ENST00000621856 DBNDD1Q9H9R9 158 aa25.19■■□□□ 1.62
SPAST-204ENST00000621856 PTPDC1A2A3K4 754 aa25.18■■□□□ 1.62
SPAST-204ENST00000621856 SMIM22K7EJ46 135 aa25.18■■□□□ 1.62
SPAST-204ENST00000621856 SLC3A2P08195 630 aaKnown RBP25.18■■□□□ 1.62
SPAST-204ENST00000621856 PCP11498 1178 aaKnown RBP25.18■■□□□ 1.62
SPAST-204ENST00000621856 HMGN5P82970 282 aaKnown RBP25.18■■□□□ 1.62
SPAST-204ENST00000621856 SBK1Q52WX2 424 aa25.18■■□□□ 1.62
SPAST-204ENST00000621856 LY9Q9HBG7 655 aa25.18■■□□□ 1.62
SPAST-204ENST00000621856 MCM9Q9NXL9 1143 aa25.18■■□□□ 1.62
SPAST-204ENST00000621856 GPR75-ASB3A0A0A6YYF3 556 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 ERICH2A1L162 156 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 DHX16O60231 1041 aaKnown RBP25.17■■□□□ 1.62
SPAST-204ENST00000621856 ZBTB7AO95365 584 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 CTDNEP1O95476 244 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 PLCG2P16885 1265 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 PODNQ7Z5L7 613 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 RAB11FIP4Q86YS3 637 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 TTLL6Q8N841 843 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 FAM163AQ96GL9 167 aaPredicted RBP25.17■■□□□ 1.62
SPAST-204ENST00000621856 CHAMP1Q96JM3 812 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 HPS5Q9UPZ3 1129 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 KIF3AQ9Y496 699 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 CYP2D6P10635 497 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 FOXD4L6Q3SYB3 417 aaPredicted RBP25.17■■□□□ 1.62
SPAST-204ENST00000621856 FOXD4L3Q6VB84 417 aaPredicted RBP25.17■■□□□ 1.62
SPAST-204ENST00000621856 SUPT20HQ8NEM7 779 aa25.17■■□□□ 1.62
SPAST-204ENST00000621856 GAKO14976 1311 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 CCDC69A6NI79 296 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 F8W031 263 aaPredicted RBP25.16■■□□□ 1.62
SPAST-204ENST00000621856 C21orf2O43822 256 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 LIFRP42702 1097 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 AMOTL1Q8IY63 956 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 TEX11Q8IYF3 940 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 TGFBRAP1Q8WUH2 860 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 ZKSCAN3Q9BRR0 538 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 UBAC1Q9BSL1 405 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 MTA3Q9BTC8 594 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 SENP2Q9HC62 589 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 ATP6V1DQ9Y5K8 247 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 CDK5RAP2Q96SN8 1893 aa25.16■■□□□ 1.62
SPAST-204ENST00000621856 USP17L8P0C7I0 530 aa25.15■■□□□ 1.62
SPAST-204ENST00000621856 DPEP1P16444 411 aa25.15■■□□□ 1.62
SPAST-204ENST00000621856 WTAPQ15007 396 aa25.15■■□□□ 1.62
SPAST-204ENST00000621856 SKOR2Q2VWA4 1001 aaPredicted RBP25.15■■□□□ 1.62
SPAST-204ENST00000621856 SGMS1Q86VZ5 419 aa25.15■■□□□ 1.62
SPAST-204ENST00000621856 CERS5Q8N5B7 392 aa25.15■■□□□ 1.62
SPAST-204ENST00000621856 KIF13BQ9NQT8 1826 aa25.15■■□□□ 1.62
SPAST-204ENST00000621856 CPLX1O14810 134 aa25.15■■□□□ 1.62
SPAST-204ENST00000621856 ECE2O60344 883 aa25.15■■□□□ 1.62
SPAST-204ENST00000621856 RANBP6O60518 1105 aaKnown RBP25.15■■□□□ 1.62
SPAST-204ENST00000621856 METAP2P50579 478 aaKnown RBP eCLIP25.15■■□□□ 1.62
SPAST-204ENST00000621856 APOA5Q6Q788 366 aa25.15■■□□□ 1.62
SPAST-204ENST00000621856 MXD3Q9BW11 206 aa25.15■■□□□ 1.62
SPAST-204ENST00000621856 TTF2Q9UNY4 1162 aaKnown RBP25.15■■□□□ 1.62
SPAST-204ENST00000621856 ZBTB43O43298 467 aa25.14■■□□□ 1.61
SPAST-204ENST00000621856 PRDM1O75626 825 aa25.14■■□□□ 1.61
SPAST-204ENST00000621856 POLD1P28340 1107 aa25.14■■□□□ 1.61
SPAST-204ENST00000621856 SYNE3Q6ZMZ3 975 aa25.14■■□□□ 1.61
SPAST-204ENST00000621856 CDC37L1Q7L3B6 337 aa25.14■■□□□ 1.61
SPAST-204ENST00000621856 MAPKAPK5Q8IW41 473 aa25.14■■□□□ 1.61
SPAST-204ENST00000621856 MKRN1Q9UHC7 482 aaKnown RBP25.14■■□□□ 1.61
SPAST-204ENST00000621856 ATF5Q9Y2D1 282 aaPredicted RBP25.14■■□□□ 1.61
SPAST-204ENST00000621856 H3BQV1 296 aa25.13■■□□□ 1.61
SPAST-204ENST00000621856 FGRP09769 529 aa25.13■■□□□ 1.61
SPAST-204ENST00000621856 EVX2Q03828 476 aa25.13■■□□□ 1.61
SPAST-204ENST00000621856 AOC3Q16853 763 aa25.13■■□□□ 1.61
SPAST-204ENST00000621856 SLC4A8Q2Y0W8 1093 aa25.13■■□□□ 1.61
SPAST-204ENST00000621856 CCDC93Q567U6 631 aa25.13■■□□□ 1.61
SPAST-204ENST00000621856 IFFO2Q5TF58 517 aa25.13■■□□□ 1.61
SPAST-204ENST00000621856 SNED1Q8TER0 1413 aa25.13■■□□□ 1.61
SPAST-204ENST00000621856 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.13■■□□□ 1.61
SPAST-204ENST00000621856 DAGLAQ9Y4D2 1042 aa25.13■■□□□ 1.61
SPAST-204ENST00000621856 SLC12A7Q9Y666 1083 aa25.13■■□□□ 1.61
SPAST-204ENST00000621856 ORC4O43929 436 aa25.12■■□□□ 1.61
SPAST-204ENST00000621856 PRPF40AO75400 957 aaKnown RBP25.12■■□□□ 1.61
SPAST-204ENST00000621856 PDE4BQ07343 736 aa25.12■■□□□ 1.61
SPAST-204ENST00000621856 GRIPAP1Q4V328 841 aa25.12■■□□□ 1.61
SPAST-204ENST00000621856 C12orf60Q5U649 245 aa25.12■■□□□ 1.61
SPAST-204ENST00000621856 MICU3Q86XE3 530 aa25.12■■□□□ 1.61
SPAST-204ENST00000621856 LMBRD1Q9NUN5 540 aa25.12■■□□□ 1.61
SPAST-204ENST00000621856 GOLGA8AA7E2F4 631 aa25.12■■□□□ 1.61
SPAST-204ENST00000621856 TMTC2Q8N394 836 aa25.12■■□□□ 1.61
SPAST-204ENST00000621856 PPFIA3O75145 1194 aa25.11■■□□□ 1.61
SPAST-204ENST00000621856 POLR3DP05423 398 aaPredicted RBP25.11■■□□□ 1.61
SPAST-204ENST00000621856 RXRAP19793 462 aa25.11■■□□□ 1.61
SPAST-204ENST00000621856 KIAA2012Q0VF49 1180 aa25.11■■□□□ 1.61
SPAST-204ENST00000621856 MTFR1LQ9H019 292 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms