RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 CLRN2A0PK11 232 aa6.99□□□□□ -1.29
FMR1-217ENST00000620828 CA12O43570 354 aa6.99□□□□□ -1.29
FMR1-217ENST00000620828 SURF6O75683 361 aaKnown RBP6.99□□□□□ -1.29
FMR1-217ENST00000620828 VGLL4Q14135 290 aa6.99□□□□□ -1.29
FMR1-217ENST00000620828 UBE2Q2LH0YL09 131 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 IGF2BP3O00425 579 aaKnown RBP eCLIP6.98□□□□□ -1.29
FMR1-217ENST00000620828 HUNKP57058 714 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 TBC1D9Q6ZT07 1266 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 OSBPL5Q9H0X9 879 aaPredicted RBP6.98□□□□□ -1.29
FMR1-217ENST00000620828 EHD4Q9H223 541 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 OSBPL3Q9H4L5 887 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 GNL3LQ9NVN8 582 aaKnown RBP6.98□□□□□ -1.29
FMR1-217ENST00000620828 AFG3L2Q9Y4W6 797 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 BTDP43251 543 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 FLT1P17948 1338 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 F8W031 263 aaPredicted RBP6.98□□□□□ -1.29
FMR1-217ENST00000620828 CACNB3P54284 484 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 HSP90AB4PQ58FF6 505 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 SPTY2D1Q68D10 685 aaPredicted RBP6.98□□□□□ -1.29
FMR1-217ENST00000620828 SH3RF3Q8TEJ3 882 aaPredicted RBP6.98□□□□□ -1.29
FMR1-217ENST00000620828 CRBNQ96SW2 442 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 SLC45A1Q9Y2W3 748 aa6.98□□□□□ -1.29
FMR1-217ENST00000620828 NOVP48745 357 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 TNFAIP1Q13829 316 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 SH3D19Q5HYK7 790 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 IFNL1Q8IU54 200 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 GUCY1A2P33402 732 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 RGS19P49795 217 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 PPIL2Q13356 520 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 CHMP4BQ9H444 224 aaKnown RBP6.97□□□□□ -1.29
FMR1-217ENST00000620828 SNRKQ9NRH2 765 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 A0A0G2JLL6 359 aaPredicted RBP6.97□□□□□ -1.29
FMR1-217ENST00000620828 ADD2P35612 726 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 CTCFP49711 727 aaPredicted RBP6.97□□□□□ -1.29
FMR1-217ENST00000620828 SUPT20HL1Q3ZLR7 823 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 PRRT2Q7Z6L0 340 aaPredicted RBP6.97□□□□□ -1.29
FMR1-217ENST00000620828 ANKRD13AQ8IZ07 590 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 BRI3BPQ8WY22 251 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 CCDC8Q9H0W5 538 aaPredicted RBP6.97□□□□□ -1.29
FMR1-217ENST00000620828 IGHDP01880 384 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 SLURP2P0DP57 97 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 RGS3P49796 1198 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 MAP3K9P80192 1104 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 CNKSR2Q8WXI2 1034 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 CENPFP49454 3210 aa6.97□□□□□ -1.29
FMR1-217ENST00000620828 G3V3G9 751 aa6.96□□□□□ -1.29
FMR1-217ENST00000620828 CHGBP05060 677 aa6.96□□□□□ -1.29
FMR1-217ENST00000620828 PPATQ06203 517 aa6.96□□□□□ -1.29
FMR1-217ENST00000620828 CHAF1AQ13111 956 aaPredicted RBP6.96□□□□□ -1.29
FMR1-217ENST00000620828 DCAF8Q5TAQ9 597 aa6.96□□□□□ -1.29
FMR1-217ENST00000620828 IFFO2Q5TF58 517 aa6.96□□□□□ -1.29
FMR1-217ENST00000620828 PLXNA1Q9UIW2 1896 aa6.96□□□□□ -1.29
FMR1-217ENST00000620828 TTC41PQ6P2S7 1318 aa6.96□□□□□ -1.29
FMR1-217ENST00000620828 CTGFP29279 349 aa6.96□□□□□ -1.3
FMR1-217ENST00000620828 EVX2Q03828 476 aa6.96□□□□□ -1.3
FMR1-217ENST00000620828 USP40Q9NVE5 1235 aa6.96□□□□□ -1.3
FMR1-217ENST00000620828 ABT1Q9ULW3 272 aaKnown RBP6.96□□□□□ -1.3
FMR1-217ENST00000620828 PLIN4Q96Q06 1357 aa6.96□□□□□ -1.3
FMR1-217ENST00000620828 TCP10L2B9ZVM9 353 aa6.96□□□□□ -1.3
FMR1-217ENST00000620828 ARMC9Q7Z3E5 817 aa6.96□□□□□ -1.3
FMR1-217ENST00000620828 ZNF157P51786 506 aaPredicted RBP6.96□□□□□ -1.3
FMR1-217ENST00000620828 INHBEP58166 350 aa6.96□□□□□ -1.3
FMR1-217ENST00000620828 UBE3CQ15386 1083 aa6.96□□□□□ -1.3
FMR1-217ENST00000620828 NDUFB9Q9Y6M9 179 aa6.96□□□□□ -1.3
FMR1-217ENST00000620828 FGRP09769 529 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 GSTO1P78417 241 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 NBR1Q14596 966 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 AACSQ86V21 672 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 SIAH1Q8IUQ4 282 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 OTUD7AQ8TE49 926 aaPredicted RBP6.95□□□□□ -1.3
FMR1-217ENST00000620828 ZNF341Q9BYN7 854 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 GINM1Q9NU53 330 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 TACC3Q9Y6A5 838 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 MANSC4A6NHS7 340 aaPredicted RBP6.95□□□□□ -1.3
FMR1-217ENST00000620828 IRF6O14896 467 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 MYO1BO43795 1136 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 PDE6AP16499 860 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 PTPRAP18433 802 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 CERS3Q8IU89 383 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 LRRCC1Q9C099 1032 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 IGKV6D-41A0A0C4DH26 115 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 ANKRD23Q86SG2 305 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 OPTNQ96CV9 577 aa6.95□□□□□ -1.3
FMR1-217ENST00000620828 ZNFX1Q9P2E3 1918 aaKnown RBP6.94□□□□□ -1.3
FMR1-217ENST00000620828 CTNND1O60716 968 aaKnown RBP6.94□□□□□ -1.3
FMR1-217ENST00000620828 TNNI2P48788 182 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 DYNLL1P63167 89 aaKnown RBP6.94□□□□□ -1.3
FMR1-217ENST00000620828 NUCB1Q02818 461 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 CCDC158Q5M9N0 1113 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 VPS37DQ86XT2 251 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 WDR18Q9BV38 432 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 TBC1D2Q9BYX2 928 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 ANGEL1Q9UNK9 670 aaKnown RBP6.94□□□□□ -1.3
FMR1-217ENST00000620828 SMARCA5O60264 1052 aaPredicted RBP6.94□□□□□ -1.3
FMR1-217ENST00000620828 INPP5BP32019 993 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 SHMT1P34896 483 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 IREB2P48200 963 aaKnown RBP6.94□□□□□ -1.3
FMR1-217ENST00000620828 LBX1P52954 281 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 SCYL3Q8IZE3 742 aa6.94□□□□□ -1.3
FMR1-217ENST00000620828 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms