RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 FOXN1O15353 648 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 CCT6AP40227 531 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 SF3A3Q12874 501 aaKnown RBP eCLIP11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 RIC3Q7Z5B4 369 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 JMYQ8N9B5 988 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 RAPGEF4Q8WZA2 1011 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 NAPGQ99747 312 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 ADCY9O60503 1353 aa11.11□□□□□ -0.63
TNFAIP3-210ENST00000620204 NUTM2BA6NNL0 878 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 NUTM2EB1AL46 878 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 MYO1FO00160 1098 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 SCP2P22307 547 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 ACTN3Q08043 901 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 MAP9Q49MG5 647 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 NUTM2AQ8IVF1 878 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 ZNF622Q969S3 477 aaKnown RBP eCLIP11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 SCLT1Q96NL6 688 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 PFKFB2O60825 505 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 GGCXP38435 758 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 AFMP43652 599 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 TRDNQ13061 729 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 TRIM29Q14134 588 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 FILIP1LQ4L180 1135 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 RALYLQ86SE5 291 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 GRAMD1CQ8IYS0 662 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 AIFM3Q96NN9 605 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 A0A0G2JLW4 131 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 KCNQ3O43525 872 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 SRGAP2O75044 1071 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 DNA2P51530 1060 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 KCTD16Q68DU8 428 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 KIRREL3Q8IZU9 778 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 KAT14Q9H8E8 782 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 MED4Q9NPJ6 270 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 RTEL1Q9NZ71 1219 aa11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 ZNF330Q9Y3S2 320 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-210ENST00000620204 ADGRL3Q9HAR2 1447 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 CTDNEP1O95476 244 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 KCNJ6P48051 423 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 TSR1Q2NL82 804 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 TC2NQ8N9U0 490 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 IQUBQ8NA54 791 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 KAT2BQ92831 832 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 KCND1Q9NSA2 647 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 RGPD8O14715 1765 aaPredicted RBP11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 SASH1O94885 1247 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 MYL6BP14649 208 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 MCMDC2Q4G0Z9 681 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 CCDC70Q6NSX1 233 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 GPIHBP1Q8IV16 184 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 IL17REQ8NFR9 667 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 CD248Q9HCU0 757 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 JADE2Q9NQC1 790 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 SBNO1A3KN83 1393 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 GOLGA6BA6NDN3 693 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 IKBKBO14920 756 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 TEX33O43247 280 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 LRCH2Q5VUJ6 765 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 TOM1L2Q6ZVM7 507 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 N4BP2L2Q92802 583 aaPredicted RBP11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 CAPS2Q9BXY5 557 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 HDAC6Q9UBN7 1215 aa11.09□□□□□ -0.63
TNFAIP3-210ENST00000620204 PDIA3P30101 505 aaKnown RBP11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 PDE4BQ07343 736 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 RBL2Q08999 1139 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 E2F5Q15329 346 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 BEND3Q5T5X7 828 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 NFXL1Q6ZNB6 911 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 SND1Q7KZF4 910 aaKnown RBP eCLIP11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 FCHSD1Q86WN1 690 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 PSMB7Q99436 277 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 LLPHQ9BRT6 129 aaKnown RBP11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 SLAIN2Q9P270 581 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 A0A1W2PQ27 194 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 A0A1W2PQ64 194 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 A0A1W2PQD8 194 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 FKBP4Q02790 459 aaKnown RBP eCLIP11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 STOX1Q6ZVD7 989 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 KIFC2Q96AC6 838 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 PCMTD1Q96MG8 357 aaPredicted RBP11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 SNRKQ9NRH2 765 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 KCNH3Q9ULD8 1083 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 SETD1AO15047 1707 aaKnown RBP11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 RPSAP08865 295 aaKnown RBP11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 CASP14P31944 242 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 NAA25Q14CX7 972 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 RAD9BQ6WBX8 426 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 CEP89Q96ST8 783 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 MYO6Q9UM54 1294 aa11.08□□□□□ -0.64
TNFAIP3-210ENST00000620204 N4BP3O15049 544 aa11.07□□□□□ -0.64
TNFAIP3-210ENST00000620204 ADAMTS2O95450 1211 aa11.07□□□□□ -0.64
TNFAIP3-210ENST00000620204 A1BGP04217 495 aa11.07□□□□□ -0.64
TNFAIP3-210ENST00000620204 HMGB1P09429 215 aaKnown RBP11.07□□□□□ -0.64
TNFAIP3-210ENST00000620204 CMA1P23946 247 aa11.07□□□□□ -0.64
TNFAIP3-210ENST00000620204 KIAA1328Q86T90 577 aa11.07□□□□□ -0.64
TNFAIP3-210ENST00000620204 ANKRD18AQ8IVF6 992 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms