RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PDE8AO60658 829 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 DYRK4Q9NR20 520 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 CDK5RAP2Q96SN8 1893 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 LAMB1P07942 1786 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 RAB3GAP1Q15042 981 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 SEPT7Q16181 437 aaKnown RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 PIK3R5Q8WYR1 880 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 PLCD4Q9BRC7 762 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 COPRSQ9NQ92 184 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 RBM25P49756 843 aaKnown RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 SLC45A4Q5BKX6 768 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 CCDC181Q5TID7 509 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 FLIIQ13045 1269 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 C16orf72Q14CZ0 275 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 KDM4AO75164 1064 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 HOXC6P09630 235 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 IDEP14735 1019 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 TGFB2P61812 414 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 HELBQ8NG08 1087 aaPredicted RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 OSBP2Q969R2 916 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 OPTNQ96CV9 577 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 RABGAP1Q9Y3P9 1069 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 RARSP54136 660 aaKnown RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 IRX6P78412 446 aaPredicted RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 FILIP1LQ4L180 1135 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 METTL23Q86XA0 190 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 GIMAP8Q8ND71 665 aaPredicted RBP3.83□□□□□ -1.8
LPP-220ENST00000617246 ZNF428Q96B54 188 aa3.83□□□□□ -1.8
LPP-220ENST00000617246 NAV1Q8NEY1 1877 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 RAB30Q15771 203 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 ADAT2Q7Z6V5 191 aaKnown RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 ARRDC4Q8NCT1 418 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 GGNBP2Q9H3C7 697 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 ZBTB3Q9H5J0 574 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 DOLKQ9UPQ8 538 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 ECM29Q5VYK3 1845 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 METP08581 1390 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 NHSQ6T4R5 1651 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 GOLGA8CPA6NN73 597 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 GADD45BO75293 160 aaPredicted RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 RNF219Q5W0B1 726 aaPredicted RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 FOXD4L1Q9NU39 408 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 TNS2Q63HR2 1409 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 STAG3L1P0CL83 205 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 GBP2P32456 591 aaPredicted RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 STRN3Q13033 797 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 ARHGAP9Q9BRR9 750 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 DISP2A7MBM2 1401 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 EZRP15311 586 aaKnown RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 FAM13BQ9NYF5 915 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 XIRP1Q702N8 1843 aaKnown RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 SMTNL1A8MU46 457 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 IDH1O75874 414 aaKnown RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 GNAQP50148 359 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 GTF2A2P52657 109 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 CCDC89Q8N998 374 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 TBCAO75347 108 aaKnown RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 SRGAP2CP0DJJ0 459 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 CETPP11597 493 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 RGS2P41220 211 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 SLC15A2Q16348 729 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 IFT74Q96LB3 600 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 CCDC94Q9BW85 323 aaPredicted RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 RTN4Q9NQC3 1192 aaKnown RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 FBXO40Q9UH90 709 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 RGS12O14924 1447 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 XPAP23025 273 aaPredicted RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 DDX12PQ92771 950 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 GDPD2Q9HCC8 539 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 CELF2O95319 508 aaKnown RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 NNMTP40261 264 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 LIN9Q5TKA1 542 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 GNAT2P19087 354 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 CYB5D1Q6P9G0 228 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 STAMQ92783 540 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 ADARB2Q9NS39 739 aaKnown RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 ZHX1Q9UKY1 873 aaPredicted RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 P4HBP07237 508 aaKnown RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 AAMPQ13685 434 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 CATIPQ7Z7H3 387 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 RAB3IL1Q8TBN0 382 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 IRAK4Q9NWZ3 460 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 BACH1O14867 736 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 MYH9P35579 1960 aaKnown RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 PFDN6O15212 129 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 P4HA1P13674 534 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 HMGN5P82970 282 aaKnown RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 TFDP1Q14186 410 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 CES5AQ6NT32 575 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 LDHDQ86WU2 507 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 PGBD3Q8N328 593 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 FARP1Q9Y4F1 1045 aaPredicted RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 TTC22Q5TAA0 569 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 TMEM199Q8N511 208 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 GPATCH11Q8N954 259 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 SPACA7Q96KW9 195 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 AHDC1Q5TGY3 1603 aaPredicted RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 KDM6AO15550 1401 aaPredicted RBP3.82□□□□□ -1.8
LPP-220ENST00000617246 ERVV-2B6SEH9 535 aa3.82□□□□□ -1.8
LPP-220ENST00000617246 RBM19Q9Y4C8 960 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms