RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 METTL13Q8N6R0 699 aa20.96■□□□□ 0.95
GABPB1-212ENST00000615671 PAXBP1Q9Y5B6 917 aa20.96■□□□□ 0.95
GABPB1-212ENST00000615671 LONRF3Q496Y0 759 aa20.96■□□□□ 0.95
GABPB1-212ENST00000615671 KIFAP3Q92845 792 aa20.96■□□□□ 0.95
GABPB1-212ENST00000615671 NCOA5Q9HCD5 579 aaKnown RBP20.96■□□□□ 0.95
GABPB1-212ENST00000615671 UVSSAQ2YD98 709 aa20.95■□□□□ 0.95
GABPB1-212ENST00000615671 DHX32Q7L7V1 743 aaKnown RBP20.95■□□□□ 0.95
GABPB1-212ENST00000615671 USP21Q9UK80 565 aa20.95■□□□□ 0.95
GABPB1-212ENST00000615671 M0QZ92 97 aa20.95■□□□□ 0.94
GABPB1-212ENST00000615671 PUM3Q15397 648 aaKnown RBP20.95■□□□□ 0.94
GABPB1-212ENST00000615671 TRIM7Q9C029 511 aa20.95■□□□□ 0.94
GABPB1-212ENST00000615671 ABCC1P33527 1531 aa20.95■□□□□ 0.94
GABPB1-212ENST00000615671 IRX3P78415 501 aaPredicted RBP20.95■□□□□ 0.94
GABPB1-212ENST00000615671 NIM1KQ8IY84 436 aa20.95■□□□□ 0.94
GABPB1-212ENST00000615671 RRP9O43818 475 aaKnown RBP20.95■□□□□ 0.94
GABPB1-212ENST00000615671 RPL13P26373 211 aaKnown RBP20.95■□□□□ 0.94
GABPB1-212ENST00000615671 HGSO14964 777 aaPredicted RBP20.94■□□□□ 0.94
GABPB1-212ENST00000615671 PPIP5K2O43314 1243 aa20.94■□□□□ 0.94
GABPB1-212ENST00000615671 G2E3Q7L622 706 aa20.94■□□□□ 0.94
GABPB1-212ENST00000615671 KCNA6P17658 529 aa20.94■□□□□ 0.94
GABPB1-212ENST00000615671 FAM47AQ5JRC9 791 aa20.94■□□□□ 0.94
GABPB1-212ENST00000615671 PHACTR3Q96KR7 559 aa20.94■□□□□ 0.94
GABPB1-212ENST00000615671 FLT4P35916 1363 aa20.94■□□□□ 0.94
GABPB1-212ENST00000615671 NPATQ14207 1427 aa20.94■□□□□ 0.94
GABPB1-212ENST00000615671 MYCP01106 439 aaPredicted RBP20.93■□□□□ 0.94
GABPB1-212ENST00000615671 HDAC1Q13547 482 aaPredicted RBP20.93■□□□□ 0.94
GABPB1-212ENST00000615671 ARHGAP27Q6ZUM4 889 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 KLHL40Q2TBA0 621 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 GADL1Q6ZQY3 521 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 MYCT1Q8N699 235 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 FAM200AQ8TCP9 573 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 SLC1A4P43007 532 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 SYT10Q6XYQ8 523 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 NELFCDQ8IXH7 590 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 IQUBQ8NA54 791 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 KIAA1524Q8TCG1 905 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 STMN4Q9H169 189 aaPredicted RBP20.93■□□□□ 0.94
GABPB1-212ENST00000615671 SF3A3Q12874 501 aaKnown RBP eCLIP20.93■□□□□ 0.94
GABPB1-212ENST00000615671 ARFGAP3Q9NP61 516 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 LRMPQ12912 555 aa20.93■□□□□ 0.94
GABPB1-212ENST00000615671 VPS18Q9P253 973 aa20.92■□□□□ 0.94
GABPB1-212ENST00000615671 TTC41PQ6P2S7 1318 aa20.92■□□□□ 0.94
GABPB1-212ENST00000615671 TCP10L2B9ZVM9 353 aa20.92■□□□□ 0.94
GABPB1-212ENST00000615671 CALUO43852 315 aaPredicted RBP20.92■□□□□ 0.94
GABPB1-212ENST00000615671 TMCO4Q5TGY1 634 aa20.92■□□□□ 0.94
GABPB1-212ENST00000615671 OTUD7BQ6GQQ9 843 aa20.92■□□□□ 0.94
GABPB1-212ENST00000615671 RDH13Q8NBN7 331 aa20.92■□□□□ 0.94
GABPB1-212ENST00000615671 TRIM31Q9BZY9 425 aa20.92■□□□□ 0.94
GABPB1-212ENST00000615671 LUC7L2Q9Y383 392 aaKnown RBP20.92■□□□□ 0.94
GABPB1-212ENST00000615671 HSPA1LP34931 641 aa20.92■□□□□ 0.94
GABPB1-212ENST00000615671 CCDC87Q9NVE4 849 aa20.92■□□□□ 0.94
GABPB1-212ENST00000615671 OPA1O60313 960 aa20.92■□□□□ 0.94
GABPB1-212ENST00000615671 BEND3Q5T5X7 828 aa20.92■□□□□ 0.94
GABPB1-212ENST00000615671 CCDC122Q5T0U0 273 aa20.91■□□□□ 0.94
GABPB1-212ENST00000615671 MTUS1Q9ULD2 1270 aa20.91■□□□□ 0.94
GABPB1-212ENST00000615671 PDE8AO60658 829 aa20.91■□□□□ 0.94
GABPB1-212ENST00000615671 GCNT3O95395 438 aa20.91■□□□□ 0.94
GABPB1-212ENST00000615671 MNAT1P51948 309 aa20.91■□□□□ 0.94
GABPB1-212ENST00000615671 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.91■□□□□ 0.94
GABPB1-212ENST00000615671 CALCOCO1Q9P1Z2 691 aa20.91■□□□□ 0.94
GABPB1-212ENST00000615671 PRPF6O94906 941 aaKnown RBP20.91■□□□□ 0.94
GABPB1-212ENST00000615671 CALCOCO2Q13137 446 aa20.91■□□□□ 0.94
GABPB1-212ENST00000615671 ANKS4BQ8N8V4 417 aa20.91■□□□□ 0.94
GABPB1-212ENST00000615671 NOLC1Q14978 699 aaKnown RBP eCLIP20.91■□□□□ 0.94
GABPB1-212ENST00000615671 ARHGAP45Q92619 1136 aa20.91■□□□□ 0.94
GABPB1-212ENST00000615671 NAP1L3Q99457 506 aaPredicted RBP20.91■□□□□ 0.94
GABPB1-212ENST00000615671 MED10Q9BTT4 135 aa20.91■□□□□ 0.94
GABPB1-212ENST00000615671 FRMPD2Q68DX3 1309 aaPredicted RBP20.91■□□□□ 0.94
GABPB1-212ENST00000615671 ASIC2Q16515 512 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 CFAP57Q96MR6 1250 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 ORAI2Q96SN7 254 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 DOK7Q18PE1 504 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 PHKBQ93100 1093 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 PLEKHA4Q9H4M7 779 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 MTRF1LQ9UGC7 380 aaKnown RBP20.9■□□□□ 0.94
GABPB1-212ENST00000615671 TNNI3KQ59H18 835 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 DBNDD2Q9BQY9 259 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 FPGT-TNNI3KV9GXZ4 949 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 GMNNO75496 209 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 NOP9Q86U38 636 aaKnown RBP20.9■□□□□ 0.94
GABPB1-212ENST00000615671 SESTD1Q86VW0 696 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 GTPBP4Q9BZE4 634 aaKnown RBP20.9■□□□□ 0.94
GABPB1-212ENST00000615671 MYO1AQ9UBC5 1043 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 ASXL1Q8IXJ9 1541 aa20.9■□□□□ 0.94
GABPB1-212ENST00000615671 BSPRYQ5W0U4 402 aa20.89■□□□□ 0.94
GABPB1-212ENST00000615671 UTP14CQ5TAP6 766 aaKnown RBP20.89■□□□□ 0.93
GABPB1-212ENST00000615671 CASC4Q6P4E1 433 aa20.89■□□□□ 0.93
GABPB1-212ENST00000615671 ZNF790Q6PG37 636 aa20.89■□□□□ 0.93
GABPB1-212ENST00000615671 CPLX4Q7Z7G2 160 aa20.89■□□□□ 0.93
GABPB1-212ENST00000615671 HELLSQ9NRZ9 838 aa20.89■□□□□ 0.93
GABPB1-212ENST00000615671 CD19P15391 556 aa20.89■□□□□ 0.93
GABPB1-212ENST00000615671 DLGAP5Q15398 846 aa20.89■□□□□ 0.93
GABPB1-212ENST00000615671 LGR6Q9HBX8 967 aa20.89■□□□□ 0.93
GABPB1-212ENST00000615671 AFG3L2Q9Y4W6 797 aa20.89■□□□□ 0.93
GABPB1-212ENST00000615671 YTHDC2Q9H6S0 1430 aaKnown RBP20.89■□□□□ 0.93
GABPB1-212ENST00000615671 GTF2IP78347 998 aa20.89■□□□□ 0.93
GABPB1-212ENST00000615671 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.89■□□□□ 0.93
GABPB1-212ENST00000615671 RALGAPBQ86X10 1494 aa20.89■□□□□ 0.93
GABPB1-212ENST00000615671 SCNN1DP51172 638 aa20.89■□□□□ 0.93
GABPB1-212ENST00000615671 DAAM2Q86T65 1068 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms