RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 NMIQ13287 307 aaPredicted RBP10.25□□□□□ -0.77
VPS11-206ENST00000614944 C1QTNF12Q5T7M4 302 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 SLX4Q8IY92 1834 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 TCRBV5S4A2TA0A5A2 114 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 CYP2E1P05181 493 aaPredicted RBP10.25□□□□□ -0.77
VPS11-206ENST00000614944 NT5C2P49902 561 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 TGFB2P61812 414 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 ZGPATQ8N5A5 531 aaKnown RBP10.25□□□□□ -0.77
VPS11-206ENST00000614944 TDRD7Q8NHU6 1098 aaKnown RBP10.25□□□□□ -0.77
VPS11-206ENST00000614944 MTFR1LQ9H019 292 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 CTNNA3Q9UI47 895 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 SUGT1Q9Y2Z0 365 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 PAXBP1Q9Y5B6 917 aa10.25□□□□□ -0.77
VPS11-206ENST00000614944 ZAP70P43403 619 aa10.24□□□□□ -0.77
VPS11-206ENST00000614944 RASGRF1Q13972 1273 aa10.24□□□□□ -0.77
VPS11-206ENST00000614944 DEFB132Q7Z7B7 95 aa10.24□□□□□ -0.77
VPS11-206ENST00000614944 EXOC8Q8IYI6 725 aa10.24□□□□□ -0.77
VPS11-206ENST00000614944 LAMB1P07942 1786 aa10.24□□□□□ -0.77
VPS11-206ENST00000614944 SCARF1Q14162 830 aa10.24□□□□□ -0.77
VPS11-206ENST00000614944 NECTIN1Q15223 517 aa10.24□□□□□ -0.77
VPS11-206ENST00000614944 MAP9Q49MG5 647 aa10.24□□□□□ -0.77
VPS11-206ENST00000614944 C7orf43Q8WVR3 580 aa10.24□□□□□ -0.77
VPS11-206ENST00000614944 FAM205AQ6ZU69 1335 aa10.24□□□□□ -0.77
VPS11-206ENST00000614944 H0YIN7 160 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 MYO1CO00159 1063 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 TAF5LO75529 589 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 HIBADHP31937 336 aaKnown RBP10.23□□□□□ -0.77
VPS11-206ENST00000614944 CYP2C19P33261 490 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 MCM2P49736 904 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 CHAF1AQ13111 956 aaPredicted RBP10.23□□□□□ -0.77
VPS11-206ENST00000614944 ALX1Q15699 326 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 ZNF804AQ7Z570 1209 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
VPS11-206ENST00000614944 DDX60LQ5H9U9 1706 aaKnown RBP10.23□□□□□ -0.77
VPS11-206ENST00000614944 MAP2K2P36507 400 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 GPSM2P81274 684 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 NOLC1Q14978 699 aaKnown RBP eCLIP10.23□□□□□ -0.77
VPS11-206ENST00000614944 SGIP1Q9BQI5 828 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 SUDS3Q9H7L9 328 aaPredicted RBP10.23□□□□□ -0.77
VPS11-206ENST00000614944 GGA1Q9UJY5 639 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 FER1L6Q2WGJ9 1857 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 A0A0D9SFI3 127 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 PAX7P23759 505 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 SOGA3Q5TF21 947 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 ANAPC4Q9UJX5 808 aa10.23□□□□□ -0.77
VPS11-206ENST00000614944 GNAT2P19087 354 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 MAP3K12Q12852 859 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 SPTY2D1Q68D10 685 aaPredicted RBP10.22□□□□□ -0.77
VPS11-206ENST00000614944 ANKRD20A12PQ8NF67 263 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 WDR66Q8TBY9 1149 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 CCDC196A0A1B0GTZ2 297 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 SCP2P22307 547 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 CWC27Q6UX04 472 aaKnown RBP10.22□□□□□ -0.77
VPS11-206ENST00000614944 C2CD5Q86YS7 1000 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 SUPT20HQ8NEM7 779 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 TBC1D16Q8TBP0 767 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 TBC1D22AQ8WUA7 517 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 COA1Q9GZY4 146 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 IL25Q9H293 177 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 KDM4CQ9H3R0 1056 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 PIH1D3Q9NQM4 214 aaKnown RBP10.22□□□□□ -0.77
VPS11-206ENST00000614944 MAP4K4O95819 1239 aaPredicted RBP10.22□□□□□ -0.77
VPS11-206ENST00000614944 KRT32Q14532 448 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 FBXL16Q8N461 479 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 HELBQ8NG08 1087 aaPredicted RBP10.22□□□□□ -0.77
VPS11-206ENST00000614944 EYA3Q99504 573 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 MAST3O60307 1309 aa10.22□□□□□ -0.77
VPS11-206ENST00000614944 BCAMP50895 628 aa10.21□□□□□ -0.77
VPS11-206ENST00000614944 CHD4Q14839 1912 aa10.21□□□□□ -0.77
VPS11-206ENST00000614944 RNF20Q5VTR2 975 aa10.21□□□□□ -0.77
VPS11-206ENST00000614944 FAM227BQ96M60 508 aa10.21□□□□□ -0.77
VPS11-206ENST00000614944 WDR19Q8NEZ3 1342 aa10.21□□□□□ -0.78
VPS11-206ENST00000614944 TTC31Q49AM3 519 aaPredicted RBP10.21□□□□□ -0.78
VPS11-206ENST00000614944 MUM1L1Q5H9M0 696 aa10.21□□□□□ -0.78
VPS11-206ENST00000614944 GIMAP6Q6P9H5 292 aa10.21□□□□□ -0.78
VPS11-206ENST00000614944 TBC1D2Q9BYX2 928 aa10.21□□□□□ -0.78
VPS11-206ENST00000614944 ANO2Q9NQ90 1003 aa10.21□□□□□ -0.78
VPS11-206ENST00000614944 CD2APQ9Y5K6 639 aa10.21□□□□□ -0.78
VPS11-206ENST00000614944 TRIM66O15016 1216 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 PDE6AP16499 860 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 SF3A1Q15459 793 aaKnown RBP10.2□□□□□ -0.78
VPS11-206ENST00000614944 MSL3Q8N5Y2 521 aaKnown RBP10.2□□□□□ -0.78
VPS11-206ENST00000614944 ERCC4Q92889 916 aaPredicted RBP10.2□□□□□ -0.78
VPS11-206ENST00000614944 MRIQ9BWK5 157 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 EP400Q96L91 3159 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 CDK5RAP2Q96SN8 1893 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 CAND2O75155 1236 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 FKBP4Q02790 459 aaKnown RBP eCLIP10.2□□□□□ -0.78
VPS11-206ENST00000614944 ZSCAN26Q16670 478 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
VPS11-206ENST00000614944 MKL1Q969V6 931 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 FAM163AQ96GL9 167 aaPredicted RBP10.2□□□□□ -0.78
VPS11-206ENST00000614944 SMC3Q9UQE7 1217 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 E2F4Q16254 413 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 WASHC4Q2M389 1173 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 SYT10Q6XYQ8 523 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 GBP4Q96PP9 640 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 TMX4Q9H1E5 349 aaPredicted RBP10.2□□□□□ -0.78
VPS11-206ENST00000614944 ECM29Q5VYK3 1845 aa10.2□□□□□ -0.78
VPS11-206ENST00000614944 ZRSR2Q15696 482 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms