RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 DISC1Q9NRI5 854 aa8.77□□□□□ -1.01
SCAMP1-205ENST00000614488 NFKBIBQ15653 356 aa8.76□□□□□ -1.01
SCAMP1-205ENST00000614488 RNF112Q9ULX5 631 aa8.76□□□□□ -1.01
SCAMP1-205ENST00000614488 NFICP08651 508 aa8.75□□□□□ -1.01
SCAMP1-205ENST00000614488 ZMYM1Q5SVZ6 1142 aa8.75□□□□□ -1.01
SCAMP1-205ENST00000614488 RNF214Q8ND24 703 aa8.75□□□□□ -1.01
SCAMP1-205ENST00000614488 PRKAG2Q9UGJ0 569 aa8.75□□□□□ -1.01
SCAMP1-205ENST00000614488 PCDHA4Q9UN74 947 aa8.75□□□□□ -1.01
SCAMP1-205ENST00000614488 LMNB1P20700 586 aa8.74□□□□□ -1.01
SCAMP1-205ENST00000614488 TTLL4Q14679 1199 aa8.74□□□□□ -1.01
SCAMP1-205ENST00000614488 MAP3K11Q16584 847 aa8.74□□□□□ -1.01
SCAMP1-205ENST00000614488 SEZ6L2Q6UXD5 910 aa8.74□□□□□ -1.01
SCAMP1-205ENST00000614488 ZDHHC13Q8IUH4 622 aa8.74□□□□□ -1.01
SCAMP1-205ENST00000614488 SMYD4Q8IYR2 804 aaPredicted RBP8.74□□□□□ -1.01
SCAMP1-205ENST00000614488 GIMAP7Q8NHV1 300 aa8.74□□□□□ -1.01
SCAMP1-205ENST00000614488 DAGLAQ9Y4D2 1042 aa8.74□□□□□ -1.01
SCAMP1-205ENST00000614488 RING1Q06587 406 aa8.73□□□□□ -1.01
SCAMP1-205ENST00000614488 CPSF6Q16630 551 aaKnown RBP eCLIP8.73□□□□□ -1.01
SCAMP1-205ENST00000614488 PHC3Q8NDX5 983 aa8.73□□□□□ -1.01
SCAMP1-205ENST00000614488 MFSD14AQ96MC6 490 aa8.73□□□□□ -1.01
SCAMP1-205ENST00000614488 RSRP1Q9BUV0 290 aa8.73□□□□□ -1.01
SCAMP1-205ENST00000614488 NEFMP07197 916 aa8.72□□□□□ -1.01
SCAMP1-205ENST00000614488 HCLS1P14317 486 aaPredicted RBP8.72□□□□□ -1.01
SCAMP1-205ENST00000614488 TFE3P19532 575 aaPredicted RBP8.72□□□□□ -1.01
SCAMP1-205ENST00000614488 PTPN11Q06124 597 aaPredicted RBP8.72□□□□□ -1.01
SCAMP1-205ENST00000614488 PWP1Q13610 501 aa8.72□□□□□ -1.01
SCAMP1-205ENST00000614488 ZAR1Q86SH2 424 aa8.72□□□□□ -1.01
SCAMP1-205ENST00000614488 SHKBP1Q8TBC3 707 aa8.72□□□□□ -1.01
SCAMP1-205ENST00000614488 ELMO3Q96BJ8 720 aa8.72□□□□□ -1.01
SCAMP1-205ENST00000614488 MIR1-1HGQ9H1L0 117 aa8.72□□□□□ -1.01
SCAMP1-205ENST00000614488 CCDC9Q9Y3X0 531 aaKnown RBP8.72□□□□□ -1.01
SCAMP1-205ENST00000614488 PCDHB5Q9Y5E4 795 aa8.72□□□□□ -1.01
SCAMP1-205ENST00000614488 DCDC2CA8MYV0 355 aa8.71□□□□□ -1.02
SCAMP1-205ENST00000614488 FANCGO15287 622 aa8.71□□□□□ -1.02
SCAMP1-205ENST00000614488 XP32Q5T750 250 aa8.71□□□□□ -1.02
SCAMP1-205ENST00000614488 HDXQ7Z353 690 aa8.71□□□□□ -1.02
SCAMP1-205ENST00000614488 GATA6Q92908 595 aa8.71□□□□□ -1.02
SCAMP1-205ENST00000614488 ISL2Q96A47 359 aa8.71□□□□□ -1.02
SCAMP1-205ENST00000614488 TBC1D32Q96NH3 1257 aa8.71□□□□□ -1.02
SCAMP1-205ENST00000614488 METTL22Q9BUU2 404 aaPredicted RBP8.71□□□□□ -1.02
SCAMP1-205ENST00000614488 C1GALT1Q9NS00 363 aa8.71□□□□□ -1.02
SCAMP1-205ENST00000614488 PCOLCE2Q9UKZ9 415 aa8.71□□□□□ -1.02
SCAMP1-205ENST00000614488 SNCAIPQ9Y6H5 919 aa8.71□□□□□ -1.02
SCAMP1-205ENST00000614488 WDR64B1ANS9 1081 aa8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 DYNC1LI2O43237 492 aaPredicted RBP8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 RNGTTO60942 597 aaKnown RBP8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 F13BP05160 661 aa8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 NTF4P34130 210 aa8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 SEPT6Q14141 434 aa8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 PPM1JQ5JR12 505 aa8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 ZBTB37Q5TC79 503 aa8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 LRFN4Q6PJG9 635 aa8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 CCDC84Q86UT8 332 aaPredicted RBP8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 RGS22Q8NE09 1264 aa8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 RHOVQ96L33 236 aa8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 ATG3Q9NT62 314 aa8.7□□□□□ -1.02
SCAMP1-205ENST00000614488 ADMP35318 185 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 LMNB2Q03252 620 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 INPP5AQ14642 412 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 WIPI1Q5MNZ9 446 aaPredicted RBP8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 DIEXFQ68CQ4 756 aaKnown RBP8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 CYFIP1Q7L576 1253 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 ERMP1Q7Z2K6 904 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 C12orf40Q86WS4 652 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 RELL1Q8IUW5 271 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 FBXL6Q8N531 539 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 PLPPR2Q96GM1 343 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 TMEM74Q96NL1 305 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 PICK1Q9NRD5 415 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 TLR6Q9Y2C9 796 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 CSADQ9Y600 493 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 TACC3Q9Y6A5 838 aa8.69□□□□□ -1.02
SCAMP1-205ENST00000614488 PRR19A6NJB7 356 aa8.68□□□□□ -1.02
SCAMP1-205ENST00000614488 TGFB1P01137 390 aa8.68□□□□□ -1.02
SCAMP1-205ENST00000614488 VAMP1P23763 118 aa8.68□□□□□ -1.02
SCAMP1-205ENST00000614488 CYP27A1Q02318 531 aa8.68□□□□□ -1.02
SCAMP1-205ENST00000614488 LRP8Q14114 963 aa8.68□□□□□ -1.02
SCAMP1-205ENST00000614488 TSNAXIP1Q2TAA8 658 aa8.68□□□□□ -1.02
SCAMP1-205ENST00000614488 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.68□□□□□ -1.02
SCAMP1-205ENST00000614488 KCT2Q8NC54 265 aa8.68□□□□□ -1.02
SCAMP1-205ENST00000614488 OSBPL1AQ9BXW6 950 aa8.68□□□□□ -1.02
SCAMP1-205ENST00000614488 INTS5Q6P9B9 1019 aaKnown RBP8.67□□□□□ -1.02
SCAMP1-205ENST00000614488 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.67□□□□□ -1.02
SCAMP1-205ENST00000614488 SSU72Q9NP77 194 aaKnown RBP8.67□□□□□ -1.02
SCAMP1-205ENST00000614488 PIM2Q9P1W9 311 aa8.67□□□□□ -1.02
SCAMP1-205ENST00000614488 COBLO75128 1261 aa8.66□□□□□ -1.02
SCAMP1-205ENST00000614488 GBP2P32456 591 aaPredicted RBP8.66□□□□□ -1.02
SCAMP1-205ENST00000614488 GRIK1P39086 918 aa8.66□□□□□ -1.02
SCAMP1-205ENST00000614488 RPL6Q02878 288 aaKnown RBP8.66□□□□□ -1.02
SCAMP1-205ENST00000614488 CAMK2GQ13555 558 aaPredicted RBP8.66□□□□□ -1.02
SCAMP1-205ENST00000614488 LDLRAD1Q5T700 205 aa8.66□□□□□ -1.02
SCAMP1-205ENST00000614488 HS2ST1Q7LGA3 356 aa8.66□□□□□ -1.02
SCAMP1-205ENST00000614488 ZNF507Q8TCN5 953 aa8.66□□□□□ -1.02
SCAMP1-205ENST00000614488 PSMG3-AS1Q96PY0 264 aa8.66□□□□□ -1.02
SCAMP1-205ENST00000614488 PRAMEF27A3QJZ7 478 aa8.65□□□□□ -1.02
SCAMP1-205ENST00000614488 GFRA2O00451 464 aa8.65□□□□□ -1.02
SCAMP1-205ENST00000614488 PF4P02776 101 aa8.65□□□□□ -1.02
SCAMP1-205ENST00000614488 CD97P48960 835 aa8.65□□□□□ -1.02
SCAMP1-205ENST00000614488 OGFOD3Q6PK18 319 aa8.65□□□□□ -1.02
SCAMP1-205ENST00000614488 SHISA5Q8N114 240 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms