RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 JMYQ8N9B5 988 aa18.93■□□□□ 0.62
TSKU-205ENST00000612930 ENOX1Q8TC92 643 aaKnown RBP18.93■□□□□ 0.62
TSKU-205ENST00000612930 C4AP0C0L4 1744 aa18.93■□□□□ 0.62
TSKU-205ENST00000612930 C4BP0C0L5 1744 aa18.93■□□□□ 0.62
TSKU-205ENST00000612930 LOC102724159A0A0B4J2E5 919 aa18.92■□□□□ 0.62
TSKU-205ENST00000612930 PWP2Q15269 919 aaKnown RBP18.92■□□□□ 0.62
TSKU-205ENST00000612930 KIF4BQ2VIQ3 1234 aa18.92■□□□□ 0.62
TSKU-205ENST00000612930 METTL22Q9BUU2 404 aaPredicted RBP18.92■□□□□ 0.62
TSKU-205ENST00000612930 UBR1Q8IWV7 1749 aa18.92■□□□□ 0.62
TSKU-205ENST00000612930 ANTXR2P58335 489 aa18.92■□□□□ 0.62
TSKU-205ENST00000612930 RABL6Q3YEC7 729 aaPredicted RBP18.92■□□□□ 0.62
TSKU-205ENST00000612930 PLEKHO1Q53GL0 409 aaPredicted RBP18.92■□□□□ 0.62
TSKU-205ENST00000612930 MB21D2Q8IYB1 491 aaPredicted RBP18.92■□□□□ 0.62
TSKU-205ENST00000612930 LRRC59Q96AG4 307 aaKnown RBP18.92■□□□□ 0.62
TSKU-205ENST00000612930 FOXP2O15409 715 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 TEX33O43247 280 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 CPP00450 1065 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 MYL6BP14649 208 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 TUBB2AQ13885 445 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 ZNF827Q17R98 1081 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 SLC35F6Q8N357 371 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 TUBB2BQ9BVA1 445 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 AMOTL2Q9Y2J4 779 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 RNF113AO15541 343 aaKnown RBP18.91■□□□□ 0.62
TSKU-205ENST00000612930 PPFIA4O75335 1185 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 PRR29P0C7W0 189 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 XAGE3Q8WTP9 111 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 NEUROD6Q96NK8 337 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 NCAPGQ9BPX3 1015 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 MED4Q9NPJ6 270 aa18.91■□□□□ 0.62
TSKU-205ENST00000612930 A0A1B0GTH6 734 aa18.9■□□□□ 0.62
TSKU-205ENST00000612930 CTAGE9A4FU28 777 aa18.9■□□□□ 0.62
TSKU-205ENST00000612930 ABL1P00519 1130 aa18.9■□□□□ 0.62
TSKU-205ENST00000612930 TUBB4BP68371 445 aa18.9■□□□□ 0.62
TSKU-205ENST00000612930 SPECC1Q5M775 1068 aa18.9■□□□□ 0.62
TSKU-205ENST00000612930 KRT40Q6A162 431 aa18.9■□□□□ 0.62
TSKU-205ENST00000612930 NOA1Q8NC60 698 aaKnown RBP18.9■□□□□ 0.62
TSKU-205ENST00000612930 ALG1Q9BT22 464 aa18.9■□□□□ 0.62
TSKU-205ENST00000612930 DDX60Q8IY21 1712 aaKnown RBP18.9■□□□□ 0.62
TSKU-205ENST00000612930 SYF2O95926 243 aaKnown RBP18.9■□□□□ 0.62
TSKU-205ENST00000612930 RBL2Q08999 1139 aa18.9■□□□□ 0.62
TSKU-205ENST00000612930 RASGRP2Q7LDG7 609 aa18.9■□□□□ 0.62
TSKU-205ENST00000612930 OSBP2Q969R2 916 aa18.9■□□□□ 0.62
TSKU-205ENST00000612930 GBP3Q9H0R5 595 aa18.9■□□□□ 0.62
TSKU-205ENST00000612930 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.9■□□□□ 0.62
TSKU-205ENST00000612930 PLEKHG1Q9ULL1 1385 aa18.89■□□□□ 0.62
TSKU-205ENST00000612930 TIMM10P62072 90 aa18.89■□□□□ 0.62
TSKU-205ENST00000612930 COPS6Q7L5N1 327 aa18.89■□□□□ 0.62
TSKU-205ENST00000612930 UBE3BQ7Z3V4 1068 aa18.89■□□□□ 0.62
TSKU-205ENST00000612930 NUTM2AQ8IVF1 878 aaPredicted RBP18.89■□□□□ 0.62
TSKU-205ENST00000612930 CDC5LQ99459 802 aaKnown RBP18.89■□□□□ 0.62
TSKU-205ENST00000612930 TAOK2Q9UL54 1235 aa18.89■□□□□ 0.62
TSKU-205ENST00000612930 CTAGE15A4D2H0 777 aa18.89■□□□□ 0.61
TSKU-205ENST00000612930 RNF40O75150 1001 aa18.89■□□□□ 0.61
TSKU-205ENST00000612930 CTAGE8P0CG41 777 aa18.89■□□□□ 0.61
TSKU-205ENST00000612930 SART3Q15020 963 aaKnown RBP18.89■□□□□ 0.61
TSKU-205ENST00000612930 APTXQ7Z2E3 356 aaKnown RBP18.89■□□□□ 0.61
TSKU-205ENST00000612930 CTAGE6Q86UF2 777 aa18.89■□□□□ 0.61
TSKU-205ENST00000612930 CTAGE4Q8IX94 777 aa18.89■□□□□ 0.61
TSKU-205ENST00000612930 EFCAB13Q8IY85 973 aa18.89■□□□□ 0.61
TSKU-205ENST00000612930 MLKLQ8NB16 471 aa18.89■□□□□ 0.61
TSKU-205ENST00000612930 CPLX3Q8WVH0 158 aa18.89■□□□□ 0.61
TSKU-205ENST00000612930 PRPF6O94906 941 aaKnown RBP18.88■□□□□ 0.61
TSKU-205ENST00000612930 SARSP49591 514 aaKnown RBP18.88■□□□□ 0.61
TSKU-205ENST00000612930 MORC3Q14149 939 aa18.88■□□□□ 0.61
TSKU-205ENST00000612930 POSTNQ15063 836 aa18.88■□□□□ 0.61
TSKU-205ENST00000612930 C1orf141Q5JVX7 400 aa18.88■□□□□ 0.61
TSKU-205ENST00000612930 ELOA2Q8IYF1 753 aaPredicted RBP18.88■□□□□ 0.61
TSKU-205ENST00000612930 NAA15Q9BXJ9 866 aaKnown RBP18.88■□□□□ 0.61
TSKU-205ENST00000612930 SLC9C2Q5TAH2 1124 aa18.88■□□□□ 0.61
TSKU-205ENST00000612930 NT5DC1Q5TFE4 455 aa18.88■□□□□ 0.61
TSKU-205ENST00000612930 C14orf37Q86TY3 774 aa18.88■□□□□ 0.61
TSKU-205ENST00000612930 SUGP1Q8IWZ8 645 aaKnown RBP18.88■□□□□ 0.61
TSKU-205ENST00000612930 MYCBPQ99417 103 aaPredicted RBP18.88■□□□□ 0.61
TSKU-205ENST00000612930 TNRQ92752 1358 aa18.88■□□□□ 0.61
TSKU-205ENST00000612930 WHAMMP3Q1A5X7 153 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 SIPA1L3O60292 1781 aaPredicted RBP18.87■□□□□ 0.61
TSKU-205ENST00000612930 AARSP49588 968 aaKnown RBP eCLIP18.87■□□□□ 0.61
TSKU-205ENST00000612930 TTC39AQ5SRH9 613 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 TADA2BQ86TJ2 420 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 TEX2Q8IWB9 1127 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 IGSF22Q8N9C0 903 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 AFAP1L1Q8TED9 768 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 ACBD3Q9H3P7 528 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 DEF6Q9H4E7 631 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 CHRM1P11229 460 aaPredicted RBP18.87■□□□□ 0.61
TSKU-205ENST00000612930 PBX1P40424 430 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 IMMTQ16891 758 aaKnown RBP18.87■□□□□ 0.61
TSKU-205ENST00000612930 WDR93Q6P2C0 686 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 ATG9AQ7Z3C6 839 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 ACRBPQ8NEB7 543 aa18.87■□□□□ 0.61
TSKU-205ENST00000612930 NAPGQ99747 312 aaPredicted RBP18.87■□□□□ 0.61
TSKU-205ENST00000612930 FGAP02671 866 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 PIP4K2BP78356 416 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 GRIN1Q05586 938 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 AMOTQ4VCS5 1084 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 DNAJC21Q5F1R6 531 aaKnown RBP18.86■□□□□ 0.61
TSKU-205ENST00000612930 GRAMD1CQ8IYS0 662 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 SEC31BQ9NQW1 1179 aa18.86■□□□□ 0.61
TSKU-205ENST00000612930 SERTAD1Q9UHV2 236 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms