RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 ZHX2Q9Y6X8 837 aa13.06□□□□□ -0.32
SSX3-204ENST00000612497 SYMPKQ92797 1274 aaKnown RBP13.05□□□□□ -0.32
SSX3-204ENST00000612497 CDX2Q99626 313 aaPredicted RBP13.05□□□□□ -0.32
SSX3-204ENST00000612497 MRIQ9BWK5 157 aa13.05□□□□□ -0.32
SSX3-204ENST00000612497 PICK1Q9NRD5 415 aa13.05□□□□□ -0.32
SSX3-204ENST00000612497 SLC45A1Q9Y2W3 748 aa13.05□□□□□ -0.32
SSX3-204ENST00000612497 PTPRFP10586 1907 aa13.04□□□□□ -0.32
SSX3-204ENST00000612497 TRIM32Q13049 653 aa13.04□□□□□ -0.32
SSX3-204ENST00000612497 FKBP5Q13451 457 aaPredicted RBP13.04□□□□□ -0.32
SSX3-204ENST00000612497 FBXO33Q7Z6M2 555 aa13.04□□□□□ -0.32
SSX3-204ENST00000612497 OGDHLQ9ULD0 1010 aa13.04□□□□□ -0.32
SSX3-204ENST00000612497 PFASO15067 1338 aa13.04□□□□□ -0.32
SSX3-204ENST00000612497 MAST3O60307 1309 aa13.04□□□□□ -0.32
SSX3-204ENST00000612497 APAF1O14727 1248 aa13.03□□□□□ -0.32
SSX3-204ENST00000612497 FLIIQ13045 1269 aa13.03□□□□□ -0.32
SSX3-204ENST00000612497 CAVIN4Q5BKX8 364 aa13.03□□□□□ -0.32
SSX3-204ENST00000612497 EPHA10Q5JZY3 1008 aa13.03□□□□□ -0.32
SSX3-204ENST00000612497 HHIPL2Q6UWX4 724 aa13.03□□□□□ -0.32
SSX3-204ENST00000612497 LBHD1Q9BQE6 289 aaPredicted RBP13.03□□□□□ -0.32
SSX3-204ENST00000612497 PTPRAP18433 802 aa13.02□□□□□ -0.33
SSX3-204ENST00000612497 SCYL3Q8IZE3 742 aa13.02□□□□□ -0.33
SSX3-204ENST00000612497 PUS3Q9BZE2 481 aaKnown RBP13.02□□□□□ -0.33
SSX3-204ENST00000612497 RAPGEFL1Q9UHV5 662 aa13.02□□□□□ -0.33
SSX3-204ENST00000612497 SUGT1Q9Y2Z0 365 aa13.02□□□□□ -0.33
SSX3-204ENST00000612497 AFG3L2Q9Y4W6 797 aa13.02□□□□□ -0.33
SSX3-204ENST00000612497 COL2A1P02458 1487 aaPredicted RBP13.02□□□□□ -0.33
SSX3-204ENST00000612497 NFIAQ12857 509 aa13.01□□□□□ -0.33
SSX3-204ENST00000612497 FAM110CQ1W6H9 321 aa13.01□□□□□ -0.33
SSX3-204ENST00000612497 LRRC26Q2I0M4 334 aa13.01□□□□□ -0.33
SSX3-204ENST00000612497 CDC42EP5Q6NZY7 148 aa13.01□□□□□ -0.33
SSX3-204ENST00000612497 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
SSX3-204ENST00000612497 PNMA3Q9UL41 463 aa13.01□□□□□ -0.33
SSX3-204ENST00000612497 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
SSX3-204ENST00000612497 MROH5Q6ZUA9 1318 aa13□□□□□ -0.33
SSX3-204ENST00000612497 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
SSX3-204ENST00000612497 TRIM75PA6NK02 468 aa13□□□□□ -0.33
SSX3-204ENST00000612497 PHF20L1A8MW92 1017 aa13□□□□□ -0.33
SSX3-204ENST00000612497 TWISTNBQ3B726 338 aaPredicted RBP13□□□□□ -0.33
SSX3-204ENST00000612497 MYLIPQ8WY64 445 aa13□□□□□ -0.33
SSX3-204ENST00000612497 SEMA6BQ9H3T3 888 aa13□□□□□ -0.33
SSX3-204ENST00000612497 GJD2Q9UKL4 321 aa13□□□□□ -0.33
SSX3-204ENST00000612497 AGTPBP1Q9UPW5 1226 aa13□□□□□ -0.33
SSX3-204ENST00000612497 DOCK2Q92608 1830 aa12.99□□□□□ -0.33
SSX3-204ENST00000612497 TNFRSF10AO00220 468 aa12.99□□□□□ -0.33
SSX3-204ENST00000612497 COL6A1P12109 1028 aa12.99□□□□□ -0.33
SSX3-204ENST00000612497 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
SSX3-204ENST00000612497 ZFPM1Q8IX07 1006 aa12.99□□□□□ -0.33
SSX3-204ENST00000612497 TRIB2Q92519 343 aa12.99□□□□□ -0.33
SSX3-204ENST00000612497 FAM198AQ9UFP1 575 aa12.99□□□□□ -0.33
SSX3-204ENST00000612497 DAGLAQ9Y4D2 1042 aa12.99□□□□□ -0.33
SSX3-204ENST00000612497 LRRFIP2Q9Y608 721 aaKnown RBP12.99□□□□□ -0.33
SSX3-204ENST00000612497 MYH13Q9UKX3 1938 aa12.99□□□□□ -0.33
SSX3-204ENST00000612497 PHIPQ8WWQ0 1821 aa12.99□□□□□ -0.33
SSX3-204ENST00000612497 MUC3AQ02505 3323 aa12.98□□□□□ -0.33
SSX3-204ENST00000612497 DOCK1Q14185 1865 aa12.98□□□□□ -0.33
SSX3-204ENST00000612497 PLXNB2O15031 1838 aa12.98□□□□□ -0.33
SSX3-204ENST00000612497 GRM8O00222 908 aa12.98□□□□□ -0.33
SSX3-204ENST00000612497 FOSL2P15408 326 aa12.98□□□□□ -0.33
SSX3-204ENST00000612497 CYP2B6P20813 491 aa12.98□□□□□ -0.33
SSX3-204ENST00000612497 ZEB1P37275 1124 aaPredicted RBP12.98□□□□□ -0.33
SSX3-204ENST00000612497 GCLCP48506 637 aaPredicted RBP12.98□□□□□ -0.33
SSX3-204ENST00000612497 TREML2Q5T2D2 321 aa12.98□□□□□ -0.33
SSX3-204ENST00000612497 USP40Q9NVE5 1235 aa12.98□□□□□ -0.33
SSX3-204ENST00000612497 F6X3S4 739 aa12.97□□□□□ -0.33
SSX3-204ENST00000612497 PLA2G5P39877 138 aa12.97□□□□□ -0.33
SSX3-204ENST00000612497 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
SSX3-204ENST00000612497 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
SSX3-204ENST00000612497 METTL24Q5JXM2 366 aa12.97□□□□□ -0.33
SSX3-204ENST00000612497 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
SSX3-204ENST00000612497 MAP3K21Q5TCX8 1036 aa12.97□□□□□ -0.33
SSX3-204ENST00000612497 ZSCAN29Q8IWY8 852 aaPredicted RBP12.97□□□□□ -0.33
SSX3-204ENST00000612497 FAM122AQ96E09 287 aa12.97□□□□□ -0.33
SSX3-204ENST00000612497 C9orf78Q9NZ63 289 aaPredicted RBP12.97□□□□□ -0.33
SSX3-204ENST00000612497 CTNND1O60716 968 aaKnown RBP12.96□□□□□ -0.33
SSX3-204ENST00000612497 TJAP1Q5JTD0 557 aa12.96□□□□□ -0.33
SSX3-204ENST00000612497 CCDC84Q86UT8 332 aaPredicted RBP12.96□□□□□ -0.33
SSX3-204ENST00000612497 WDR66Q8TBY9 1149 aa12.96□□□□□ -0.33
SSX3-204ENST00000612497 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.96□□□□□ -0.33
SSX3-204ENST00000612497 PRKAG2Q9UGJ0 569 aa12.96□□□□□ -0.33
SSX3-204ENST00000612497 ATRNL1Q5VV63 1379 aa12.95□□□□□ -0.34
SSX3-204ENST00000612497 CDH23Q9H251 3354 aa12.95□□□□□ -0.34
SSX3-204ENST00000612497 TMEM265A0A087WTH1 108 aa12.95□□□□□ -0.34
SSX3-204ENST00000612497 PDE8BO95263 885 aa12.95□□□□□ -0.34
SSX3-204ENST00000612497 RGS3P49796 1198 aa12.95□□□□□ -0.34
SSX3-204ENST00000612497 SHHQ15465 462 aa12.95□□□□□ -0.34
SSX3-204ENST00000612497 LRRC24Q50LG9 513 aa12.95□□□□□ -0.34
SSX3-204ENST00000612497 SENP6Q9GZR1 1112 aaPredicted RBP12.95□□□□□ -0.34
SSX3-204ENST00000612497 TTYH1Q9H313 450 aaPredicted RBP12.95□□□□□ -0.34
SSX3-204ENST00000612497 IFIT1P09914 478 aaKnown RBP12.94□□□□□ -0.34
SSX3-204ENST00000612497 SLURP2P0DP57 97 aa12.94□□□□□ -0.34
SSX3-204ENST00000612497 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
SSX3-204ENST00000612497 CCND3P30281 292 aaPredicted RBP12.94□□□□□ -0.34
SSX3-204ENST00000612497 CACNB2Q08289 660 aaPredicted RBP12.94□□□□□ -0.34
SSX3-204ENST00000612497 PABPC4Q13310 644 aaKnown RBP eCLIP12.94□□□□□ -0.34
SSX3-204ENST00000612497 PROCA1Q8NCQ7 364 aaPredicted RBP12.94□□□□□ -0.34
SSX3-204ENST00000612497 NUDT12Q9BQG2 462 aa12.94□□□□□ -0.34
SSX3-204ENST00000612497 ASCC2Q9H1I8 757 aaPredicted RBP12.94□□□□□ -0.34
SSX3-204ENST00000612497 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
SSX3-204ENST00000612497 MAST2Q6P0Q8 1798 aa12.94□□□□□ -0.34
SSX3-204ENST00000612497 ENTPD3O75355 529 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms