RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 RBM6P78332 1123 aaKnown RBP19.94■□□□□ 0.78
NEK3-206ENST00000611833 RANBP6O60518 1105 aaKnown RBP19.93■□□□□ 0.78
NEK3-206ENST00000611833 SKILP12757 684 aa19.93■□□□□ 0.78
NEK3-206ENST00000611833 NLRP12P59046 1061 aa19.93■□□□□ 0.78
NEK3-206ENST00000611833 TPM4P67936 248 aa19.93■□□□□ 0.78
NEK3-206ENST00000611833 BPIFA3Q9BQP9 254 aa19.93■□□□□ 0.78
NEK3-206ENST00000611833 CNNM2Q9H8M5 875 aa19.93■□□□□ 0.78
NEK3-206ENST00000611833 THRAP3Q9Y2W1 955 aaKnown RBP19.93■□□□□ 0.78
NEK3-206ENST00000611833 RTL9Q8NET4 1388 aa19.93■□□□□ 0.78
NEK3-206ENST00000611833 COL4A1P02462 1669 aa19.93■□□□□ 0.78
NEK3-206ENST00000611833 TIAM2Q8IVF5 1701 aa19.93■□□□□ 0.78
NEK3-206ENST00000611833 LIFRP42702 1097 aa19.93■□□□□ 0.78
NEK3-206ENST00000611833 LCORLQ8N3X6 602 aa19.93■□□□□ 0.78
NEK3-206ENST00000611833 LAMB2P55268 1798 aa19.93■□□□□ 0.78
NEK3-206ENST00000611833 SYKP43405 635 aa19.92■□□□□ 0.78
NEK3-206ENST00000611833 CHRNDQ07001 517 aa19.92■□□□□ 0.78
NEK3-206ENST00000611833 SSRP1Q08945 709 aaKnown RBP19.92■□□□□ 0.78
NEK3-206ENST00000611833 AKNAD1Q5T1N1 836 aa19.92■□□□□ 0.78
NEK3-206ENST00000611833 MFSD6Q6ZSS7 791 aa19.92■□□□□ 0.78
NEK3-206ENST00000611833 SLC26A6Q9BXS9 759 aa19.92■□□□□ 0.78
NEK3-206ENST00000611833 KRT23Q9C075 422 aa19.92■□□□□ 0.78
NEK3-206ENST00000611833 TOMM22Q9NS69 142 aa19.92■□□□□ 0.78
NEK3-206ENST00000611833 MROH7-TTC4A0A0A0MT08 1334 aa19.92■□□□□ 0.78
NEK3-206ENST00000611833 PPP6R2O75170 966 aa19.92■□□□□ 0.78
NEK3-206ENST00000611833 NACAP1Q9BZK3 213 aa19.92■□□□□ 0.78
NEK3-206ENST00000611833 UBE2Q2LH0YL09 131 aa19.91■□□□□ 0.78
NEK3-206ENST00000611833 TDO2P48775 406 aa19.91■□□□□ 0.78
NEK3-206ENST00000611833 RRP12Q5JTH9 1297 aaKnown RBP19.91■□□□□ 0.78
NEK3-206ENST00000611833 PNPLA7Q6ZV29 1317 aa19.91■□□□□ 0.78
NEK3-206ENST00000611833 BCL9LQ86UU0 1499 aa19.91■□□□□ 0.78
NEK3-206ENST00000611833 BCORQ6W2J9 1755 aa19.91■□□□□ 0.78
NEK3-206ENST00000611833 SMTNL1A8MU46 457 aa19.91■□□□□ 0.78
NEK3-206ENST00000611833 SMC2O95347 1197 aa19.91■□□□□ 0.78
NEK3-206ENST00000611833 TIGD1Q96MW7 591 aa19.91■□□□□ 0.78
NEK3-206ENST00000611833 PAXBP1Q9Y5B6 917 aa19.91■□□□□ 0.78
NEK3-206ENST00000611833 SLC4A4Q9Y6R1 1079 aa19.91■□□□□ 0.78
NEK3-206ENST00000611833 CICQ96RK0 1608 aaPredicted RBP19.9■□□□□ 0.78
NEK3-206ENST00000611833 GNAT2P19087 354 aa19.9■□□□□ 0.78
NEK3-206ENST00000611833 U2AF2P26368 475 aaKnown RBP eCLIP19.9■□□□□ 0.782e-7■■□□□ 13
NEK3-206ENST00000611833 GSDMDP57764 484 aa19.9■□□□□ 0.78
NEK3-206ENST00000611833 MIGA1Q8NAN2 632 aa19.9■□□□□ 0.78
NEK3-206ENST00000611833 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.9■□□□□ 0.78
NEK3-206ENST00000611833 PTPAQ15257 358 aa19.9■□□□□ 0.78
NEK3-206ENST00000611833 ISM2Q6H9L7 571 aa19.9■□□□□ 0.78
NEK3-206ENST00000611833 SART3Q15020 963 aaKnown RBP19.89■□□□□ 0.77
NEK3-206ENST00000611833 SHC4Q6S5L8 630 aa19.89■□□□□ 0.77
NEK3-206ENST00000611833 STAG1Q8WVM7 1258 aa19.89■□□□□ 0.77
NEK3-206ENST00000611833 WASF1Q92558 559 aa19.89■□□□□ 0.77
NEK3-206ENST00000611833 MAP3K14Q99558 947 aa19.89■□□□□ 0.77
NEK3-206ENST00000611833 IFNKQ9P0W0 207 aa19.89■□□□□ 0.77
NEK3-206ENST00000611833 LRP2BPQ9P2M1 347 aa19.89■□□□□ 0.77
NEK3-206ENST00000611833 IMPACTQ9P2X3 320 aa19.89■□□□□ 0.77
NEK3-206ENST00000611833 IQSEC3Q9UPP2 1182 aaPredicted RBP19.89■□□□□ 0.77
NEK3-206ENST00000611833 CTIFO43310 598 aaKnown RBP19.88■□□□□ 0.77
NEK3-206ENST00000611833 FMNL1O95466 1100 aaPredicted RBP19.88■□□□□ 0.77
NEK3-206ENST00000611833 NBPF11Q86T75 865 aa19.88■□□□□ 0.77
NEK3-206ENST00000611833 STK11IPQ8N1F8 1099 aa19.88■□□□□ 0.77
NEK3-206ENST00000611833 ZNF592Q92610 1267 aa19.88■□□□□ 0.77
NEK3-206ENST00000611833 ZKSCAN3Q9BRR0 538 aa19.88■□□□□ 0.77
NEK3-206ENST00000611833 XPO4Q9C0E2 1151 aaKnown RBP19.88■□□□□ 0.77
NEK3-206ENST00000611833 STK36Q9NRP7 1315 aa19.88■□□□□ 0.77
NEK3-206ENST00000611833 ERICH2A1L162 156 aa19.88■□□□□ 0.77
NEK3-206ENST00000611833 CCZ1BP86790 482 aa19.88■□□□□ 0.77
NEK3-206ENST00000611833 CCZ1P86791 482 aaPredicted RBP19.88■□□□□ 0.77
NEK3-206ENST00000611833 CEP135Q66GS9 1140 aa19.88■□□□□ 0.77
NEK3-206ENST00000611833 CLIC6Q96NY7 704 aa19.88■□□□□ 0.77
NEK3-206ENST00000611833 HPSEQ9Y251 543 aa19.88■□□□□ 0.77
NEK3-206ENST00000611833 KCNQ2O43526 872 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 WTAPQ15007 396 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 SAFBQ15424 915 aaKnown RBP eCLIP19.87■□□□□ 0.77
NEK3-206ENST00000611833 ADGRA1Q86SQ6 560 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 TRIM22Q8IYM9 498 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 CCDC94Q9BW85 323 aaPredicted RBP19.87■□□□□ 0.77
NEK3-206ENST00000611833 USP27XA6NNY8 438 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 CUTAO60888 179 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 IFNAR1P17181 557 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 RESP18Q5W5W9 173 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 CCDC112Q8NEF3 446 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 OSBPL5Q9H0X9 879 aaPredicted RBP19.87■□□□□ 0.77
NEK3-206ENST00000611833 SPATA31A5Q5VU36 1347 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 SPATA31A7Q8IWB4 1347 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 NID2Q14112 1375 aa19.87■□□□□ 0.77
NEK3-206ENST00000611833 WTIPA6NIX2 430 aaPredicted RBP19.86■□□□□ 0.77
NEK3-206ENST00000611833 PTPN14Q15678 1187 aa19.86■□□□□ 0.77
NEK3-206ENST00000611833 RTN1Q16799 776 aa19.86■□□□□ 0.77
NEK3-206ENST00000611833 TMC6Q7Z403 805 aa19.86■□□□□ 0.77
NEK3-206ENST00000611833 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.86■□□□□ 0.77
NEK3-206ENST00000611833 ZNF804BA4D1E1 1349 aa19.86■□□□□ 0.77
NEK3-206ENST00000611833 COL5A3P25940 1745 aaPredicted RBP19.86■□□□□ 0.77
NEK3-206ENST00000611833 GUCY1A2P33402 732 aa19.86■□□□□ 0.77
NEK3-206ENST00000611833 NCAPHQ15003 741 aa19.86■□□□□ 0.77
NEK3-206ENST00000611833 C3orf67Q6ZVT6 689 aa19.86■□□□□ 0.77
NEK3-206ENST00000611833 NOSTRINQ8IVI9 506 aa19.86■□□□□ 0.77
NEK3-206ENST00000611833 CDC5LQ99459 802 aaKnown RBP19.86■□□□□ 0.77
NEK3-206ENST00000611833 TRMT1Q9NXH9 659 aaKnown RBP19.86■□□□□ 0.77
NEK3-206ENST00000611833 ZNF652Q9Y2D9 606 aa19.86■□□□□ 0.77
NEK3-206ENST00000611833 CYP7A1P22680 504 aa19.85■□□□□ 0.77
NEK3-206ENST00000611833 GYG1P46976 350 aa19.85■□□□□ 0.77
NEK3-206ENST00000611833 TUBE1Q9UJT0 475 aa19.85■□□□□ 0.77
NEK3-206ENST00000611833 TAF1P21675 1872 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms