RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 MYO1BO43795 1136 aa14.42□□□□□ -0.1
CLK4-215ENST00000611733 GNAT2P19087 354 aa14.42□□□□□ -0.1
CLK4-215ENST00000611733 USP50Q70EL3 339 aaPredicted RBP14.42□□□□□ -0.1
CLK4-215ENST00000611733 SH3BP5LQ7L8J4 393 aa14.42□□□□□ -0.1
CLK4-215ENST00000611733 DSCC1Q9BVC3 393 aa14.42□□□□□ -0.1
CLK4-215ENST00000611733 PALD1Q9ULE6 856 aa14.42□□□□□ -0.1
CLK4-215ENST00000611733 TAF6LQ9Y6J9 622 aa14.42□□□□□ -0.1
CLK4-215ENST00000611733 USP17L12C9JPN9 530 aa14.41□□□□□ -0.1
CLK4-215ENST00000611733 USP17L21D6R901 530 aa14.41□□□□□ -0.1
CLK4-215ENST00000611733 PRAMEF18Q5VWM3 479 aa14.41□□□□□ -0.1
CLK4-215ENST00000611733 CTR9Q6PD62 1173 aa14.41□□□□□ -0.1
CLK4-215ENST00000611733 ATP8A2Q9NTI2 1148 aa14.41□□□□□ -0.1
CLK4-215ENST00000611733 RBM8AQ9Y5S9 174 aaKnown RBP14.41□□□□□ -0.1
CLK4-215ENST00000611733 DDTLA6NHG4 134 aaPredicted RBP14.41□□□□□ -0.1
CLK4-215ENST00000611733 STK11IPQ8N1F8 1099 aa14.41□□□□□ -0.1
CLK4-215ENST00000611733 TMEM39BQ9GZU3 492 aa14.41□□□□□ -0.1
CLK4-215ENST00000611733 OSBPL5Q9H0X9 879 aaPredicted RBP14.41□□□□□ -0.1
CLK4-215ENST00000611733 MCM9Q9NXL9 1143 aa14.41□□□□□ -0.1
CLK4-215ENST00000611733 REC8O95072 547 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 TDO2P48775 406 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 PLCD1P51178 756 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 HAND2P61296 217 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 CERS3Q8IU89 383 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 INCENPQ9NQS7 918 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 TMOD2Q9NZR1 351 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 TACC3Q9Y6A5 838 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 MINDY4BA8MYZ0 360 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 RASA3Q14644 834 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 NECTIN1Q15223 517 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 ALX1Q15699 326 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 NAPBQ9H115 298 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 PGAP2Q9UHJ9 254 aa14.4□□□□□ -0.1
CLK4-215ENST00000611733 NBPF3Q9H094 633 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 DEFB129Q9H1M3 183 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 SCN4AP35499 1836 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 CDK5RAP2Q96SN8 1893 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 ADM5C9JUS6 153 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 ENTPD3O75355 529 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 CTDSPL2Q05D32 466 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 MAP1SQ66K74 1059 aaPredicted RBP14.39□□□□□ -0.11
CLK4-215ENST00000611733 GIMAP6Q6P9H5 292 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 PNMA8AQ86V59 439 aaPredicted RBP14.39□□□□□ -0.11
CLK4-215ENST00000611733 RASEFQ8IZ41 740 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 FAM151AQ8WW52 585 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 NACAP1Q9BZK3 213 aa14.39□□□□□ -0.11
CLK4-215ENST00000611733 RPAP1Q9BWH6 1393 aaPredicted RBP14.38□□□□□ -0.11
CLK4-215ENST00000611733 POLR3DP05423 398 aaPredicted RBP14.38□□□□□ -0.11
CLK4-215ENST00000611733 CYP21A2P08686 494 aa14.38□□□□□ -0.11
CLK4-215ENST00000611733 C12orf60Q5U649 245 aa14.38□□□□□ -0.11
CLK4-215ENST00000611733 FKBP1CQ5VVH2 108 aa14.38□□□□□ -0.11
CLK4-215ENST00000611733 NKX2-3Q8TAU0 364 aa14.38□□□□□ -0.11
CLK4-215ENST00000611733 DYNLL2Q96FJ2 89 aa14.38□□□□□ -0.11
CLK4-215ENST00000611733 TEPSINQ96N21 525 aa14.38□□□□□ -0.11
CLK4-215ENST00000611733 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
CLK4-215ENST00000611733 ECM29Q5VYK3 1845 aa14.38□□□□□ -0.11
CLK4-215ENST00000611733 SLC27A2O14975 620 aa14.37□□□□□ -0.11
CLK4-215ENST00000611733 NPM3O75607 178 aaKnown RBP14.37□□□□□ -0.11
CLK4-215ENST00000611733 YY1P25490 414 aa14.37□□□□□ -0.11
CLK4-215ENST00000611733 FMR1Q06787 632 aaKnown RBP eCLIP14.37□□□□□ -0.11
CLK4-215ENST00000611733 COL9A3Q14050 684 aaPredicted RBP14.37□□□□□ -0.11
CLK4-215ENST00000611733 CREB3L3Q68CJ9 461 aa14.37□□□□□ -0.11
CLK4-215ENST00000611733 USP48Q86UV5 1035 aa14.37□□□□□ -0.11
CLK4-215ENST00000611733 ZSCAN29Q8IWY8 852 aaPredicted RBP14.37□□□□□ -0.11
CLK4-215ENST00000611733 DCPSQ96C86 337 aaKnown RBP14.37□□□□□ -0.11
CLK4-215ENST00000611733 GPBP1L1Q9HC44 474 aaPredicted RBP14.37□□□□□ -0.11
CLK4-215ENST00000611733 BAZ2AQ9UIF9 1905 aaKnown RBP14.37□□□□□ -0.11
CLK4-215ENST00000611733 FAM196BA6NMK8 535 aa14.37□□□□□ -0.11
CLK4-215ENST00000611733 PPARAQ07869 468 aa14.37□□□□□ -0.11
CLK4-215ENST00000611733 SBK1Q52WX2 424 aa14.37□□□□□ -0.11
CLK4-215ENST00000611733 FAM83AQ86UY5 434 aa14.37□□□□□ -0.11
CLK4-215ENST00000611733 ZC3H15Q8WU90 426 aaKnown RBP14.37□□□□□ -0.11
CLK4-215ENST00000611733 GLIS2Q9BZE0 524 aaPredicted RBP14.37□□□□□ -0.11
CLK4-215ENST00000611733 HSPA4P34932 840 aa14.36□□□□□ -0.11
CLK4-215ENST00000611733 NBPF12Q5TAG4 269 aaPredicted RBP14.36□□□□□ -0.11
CLK4-215ENST00000611733 KRT26Q7Z3Y9 468 aa14.36□□□□□ -0.11
CLK4-215ENST00000611733 APOBEC3FQ8IUX4 373 aaKnown RBP14.36□□□□□ -0.11
CLK4-215ENST00000611733 SLC44A5Q8NCS7 719 aa14.36□□□□□ -0.11
CLK4-215ENST00000611733 DDRGK1Q96HY6 314 aa14.36□□□□□ -0.11
CLK4-215ENST00000611733 FZD1Q9UP38 647 aa14.36□□□□□ -0.11
CLK4-215ENST00000611733 ZNF213O14771 459 aa14.36□□□□□ -0.11
CLK4-215ENST00000611733 TBC1D10CQ8IV04 446 aa14.36□□□□□ -0.11
CLK4-215ENST00000611733 POLR2AP24928 1970 aaKnown RBP14.35□□□□□ -0.11
CLK4-215ENST00000611733 KIF3CO14782 793 aa14.35□□□□□ -0.11
CLK4-215ENST00000611733 TNNI2P48788 182 aa14.35□□□□□ -0.11
CLK4-215ENST00000611733 TNFAIP1Q13829 316 aa14.35□□□□□ -0.11
CLK4-215ENST00000611733 FOCADQ5VW36 1801 aa14.35□□□□□ -0.11
CLK4-215ENST00000611733 STOX1Q6ZVD7 989 aa14.35□□□□□ -0.11
CLK4-215ENST00000611733 MIGA2Q7L4E1 593 aa14.35□□□□□ -0.11
CLK4-215ENST00000611733 CSRNP1Q96S65 589 aa14.35□□□□□ -0.11
CLK4-215ENST00000611733 PITPNM2Q9BZ72 1349 aa14.35□□□□□ -0.11
CLK4-215ENST00000611733 ARPP21Q9UBL0 812 aaPredicted RBP14.35□□□□□ -0.11
CLK4-215ENST00000611733 CTNNA3Q9UI47 895 aa14.35□□□□□ -0.11
CLK4-215ENST00000611733 ZMYM6O95789 1325 aa14.34□□□□□ -0.11
CLK4-215ENST00000611733 TRAF5O00463 557 aa14.34□□□□□ -0.11
CLK4-215ENST00000611733 PRDM1O75626 825 aa14.34□□□□□ -0.11
CLK4-215ENST00000611733 IMMTQ16891 758 aaKnown RBP14.34□□□□□ -0.11
CLK4-215ENST00000611733 ADCK5Q3MIX3 580 aa14.34□□□□□ -0.11
CLK4-215ENST00000611733 SULF1Q8IWU6 871 aa14.34□□□□□ -0.11
CLK4-215ENST00000611733 C22orf23Q9BZE7 217 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms