RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 RTL9Q8NET4 1388 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 SYCE3A1L190 88 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 TRAF5O00463 557 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 APAF1O14727 1248 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 FOXN1O15353 648 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 PPIP5K2O43314 1243 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 KDM4AO75164 1064 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 HMGB1P09429 215 aaKnown RBP5.95□□□□□ -1.46
SSX9-202ENST00000608568 NUCB1Q02818 461 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 KCNA1Q09470 495 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 TCIRG1Q13488 830 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 PARP10Q53GL7 1025 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 CCDC183Q5T5S1 534 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 HDGFL1Q5TGJ6 251 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 ZKSCAN2Q63HK3 967 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 RTKN2Q8IZC4 609 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 DOCK3Q8IZD9 2030 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 TSPYL6Q8N831 410 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 C8orf58Q8NAV2 365 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 GPT2Q8TD30 523 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 TRPM4Q8TD43 1214 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 CELF1Q92879 486 aaKnown RBP5.95□□□□□ -1.46
SSX9-202ENST00000608568 MARVELD3Q96A59 401 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 INTS4Q96HW7 963 aaKnown RBP5.95□□□□□ -1.46
SSX9-202ENST00000608568 CRAMP1Q96RY5 1269 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 ISCA1Q9BUE6 129 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 UTP14AQ9BVJ6 771 aaKnown RBP5.95□□□□□ -1.46
SSX9-202ENST00000608568 DEF6Q9H4E7 631 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 CDHR5Q9HBB8 845 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 BSDC1Q9NW68 430 aaPredicted RBP5.95□□□□□ -1.46
SSX9-202ENST00000608568 ARGLU1Q9NWB6 273 aaPredicted RBP5.95□□□□□ -1.46
SSX9-202ENST00000608568 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.95□□□□□ -1.46
SSX9-202ENST00000608568 TMEM63CQ9P1W3 806 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 RSPH14Q9UHP6 348 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 HACL1Q9UJ83 578 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.95□□□□□ -1.46
SSX9-202ENST00000608568 MYH2Q9UKX2 1941 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 ATAD5Q96QE3 1844 aa5.95□□□□□ -1.46
SSX9-202ENST00000608568 ELL2O00472 640 aaPredicted RBP5.94□□□□□ -1.46
SSX9-202ENST00000608568 EPB41L2O43491 1005 aaKnown RBP5.94□□□□□ -1.46
SSX9-202ENST00000608568 PRPF40AO75400 957 aaKnown RBP5.94□□□□□ -1.46
SSX9-202ENST00000608568 CDC45O75419 566 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 ADCY5O95622 1261 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 BRD1O95696 1058 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 CAVIN2O95810 425 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 EGFRP00533 1210 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 ALDH1B1P30837 517 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 VEGFBP49765 207 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 HNRNPH2P55795 449 aaKnown RBP5.94□□□□□ -1.46
SSX9-202ENST00000608568 GRAPQ13588 217 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 SLC10A5Q5PT55 438 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 GPC2Q8N158 579 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 LARGE2Q8N3Y3 721 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 GOLGA5Q8TBA6 731 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 GRAPLQ8TC17 118 aaPredicted RBP5.94□□□□□ -1.46
SSX9-202ENST00000608568 TSR2Q969E8 191 aaKnown RBP5.94□□□□□ -1.46
SSX9-202ENST00000608568 FAM89AQ96GI7 184 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 RBM17Q96I25 401 aaKnown RBP5.94□□□□□ -1.46
SSX9-202ENST00000608568 CEP89Q96ST8 783 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 RTFDC1Q9BY42 306 aaPredicted RBP5.94□□□□□ -1.46
SSX9-202ENST00000608568 FAM107BQ9H098 131 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 BABAM1Q9NWV8 329 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 ATP6V0A2Q9Y487 856 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 DOCK2Q92608 1830 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 SH3TC1Q8TE82 1336 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 MGAMO43451 1857 aa5.94□□□□□ -1.46
SSX9-202ENST00000608568 RBBP6Q7Z6E9 1792 aaKnown RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 CCDC196A0A1B0GTZ2 297 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 IQCA1LA6NCM1 817 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 WTIPA6NIX2 430 aaPredicted RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 MAP3K7O43318 606 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 RAD17O75943 681 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 USP8P40818 1118 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 GMPSP49915 693 aaPredicted RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 HIRAP54198 1017 aaPredicted RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 GSCP56915 257 aaPredicted RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 GPSM2P81274 684 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 CXCL9Q07325 125 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 PPP1R42Q7Z4L9 355 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 METTL3Q86U44 580 aaKnown RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 DHX37Q8IY37 1157 aaKnown RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 NIM1KQ8IY84 436 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 DZIP1LQ8IYY4 767 aaKnown RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 MSL3Q8N5Y2 521 aaKnown RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 PLBD2Q8NHP8 589 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 PANK1Q8TE04 598 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 CCDC85AQ96PX6 553 aaPredicted RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 OCEL1Q9H607 264 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 SEC31BQ9NQW1 1179 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 KCNQ5Q9NR82 932 aa5.93□□□□□ -1.46
SSX9-202ENST00000608568 TRMT112Q9UI30 125 aaKnown RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 ASTN2O75129 1339 aaPredicted RBP5.93□□□□□ -1.46
SSX9-202ENST00000608568 PHIPQ8WWQ0 1821 aa5.92□□□□□ -1.46
SSX9-202ENST00000608568 TMEM88BA6NKF7 163 aa5.92□□□□□ -1.46
SSX9-202ENST00000608568 MYO1CO00159 1063 aa5.92□□□□□ -1.46
SSX9-202ENST00000608568 IPO8O15397 1037 aaKnown RBP5.92□□□□□ -1.46
SSX9-202ENST00000608568 RPS6KA5O75582 802 aa5.92□□□□□ -1.46
SSX9-202ENST00000608568 CPP00450 1065 aa5.92□□□□□ -1.46
SSX9-202ENST00000608568 IGKV5-2P06315 115 aa5.92□□□□□ -1.46
SSX9-202ENST00000608568 HOXB7P09629 217 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms