RNA–Protein interactions for RNA: ENST00000601697.5

PSMC4-206, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-206ENST00000601697 ALG1Q9BT22 464 aa16.33■□□□□ 0.2
PSMC4-206ENST00000601697 CNNM2Q9H8M5 875 aa16.33■□□□□ 0.2
PSMC4-206ENST00000601697 LRRC4BQ9NT99 713 aa16.33■□□□□ 0.2
PSMC4-206ENST00000601697 KIAA1468Q9P260 1216 aa16.33■□□□□ 0.2
PSMC4-206ENST00000601697 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.2
PSMC4-206ENST00000601697 A0A1B0GVL5 298 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 SMTNL1A8MU46 457 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 PLSCR1O15162 318 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 POLR3DP05423 398 aaPredicted RBP16.32■□□□□ 0.2
PSMC4-206ENST00000601697 CMA1P23946 247 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 NDUFA8P51970 172 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 MAP3K12Q12852 859 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 C3orf67Q6ZVT6 689 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 AOPEPQ8N6M6 819 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 WASF1Q92558 559 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 TIGD1Q96MW7 591 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 IMPACTQ9P2X3 320 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 PAXBP1Q9Y5B6 917 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 ECM29Q5VYK3 1845 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 STK36Q9NRP7 1315 aa16.32■□□□□ 0.2
PSMC4-206ENST00000601697 ZBTB43O43298 467 aa16.31■□□□□ 0.2
PSMC4-206ENST00000601697 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
PSMC4-206ENST00000601697 LRMPQ12912 555 aa16.31■□□□□ 0.2
PSMC4-206ENST00000601697 RASGRF1Q13972 1273 aa16.31■□□□□ 0.2
PSMC4-206ENST00000601697 NFXL1Q6ZNB6 911 aa16.31■□□□□ 0.2
PSMC4-206ENST00000601697 TBC1D10CQ8IV04 446 aa16.31■□□□□ 0.2
PSMC4-206ENST00000601697 LRRC8AQ8IWT6 810 aa16.31■□□□□ 0.2
PSMC4-206ENST00000601697 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
PSMC4-206ENST00000601697 SNAP23O00161 211 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 RIOK3O14730 519 aaKnown RBP16.3■□□□□ 0.2
PSMC4-206ENST00000601697 NRDCO43847 1150 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 PPFIA3O75145 1194 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 PPP6R2O75170 966 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 GNAT2P19087 354 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 NLRP12P59046 1061 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 SLC39A14Q15043 492 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 TPD52L1Q16890 204 aaPredicted RBP16.3■□□□□ 0.2
PSMC4-206ENST00000601697 OTUD7BQ6GQQ9 843 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 APOA5Q6Q788 366 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 SGMS1Q86VZ5 419 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 NBPF5PQ86XG9 351 aaPredicted RBP16.3■□□□□ 0.2
PSMC4-206ENST00000601697 CACTINQ8WUQ7 758 aaKnown RBP16.3■□□□□ 0.2
PSMC4-206ENST00000601697 KRT23Q9C075 422 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 NBPF3Q9H094 633 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 COL4A1P02462 1669 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 TCRBV5S4A2TA0A5A2 114 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 GOLGA8AA7E2F4 631 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 PATL2C9JE40 543 aaKnown RBP16.3■□□□□ 0.2
PSMC4-206ENST00000601697 APBA3O96018 575 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 LIFRP42702 1097 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 SYCP1Q15431 976 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 CYB5R4Q7L1T6 521 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 STRBPQ96SI9 672 aaKnown RBP16.3■□□□□ 0.2
PSMC4-206ENST00000601697 NAPBQ9H115 298 aa16.3■□□□□ 0.2
PSMC4-206ENST00000601697 BSDC1Q9NW68 430 aaPredicted RBP16.3■□□□□ 0.2
PSMC4-206ENST00000601697 NID2Q14112 1375 aa16.29■□□□□ 0.2
PSMC4-206ENST00000601697 MYO5AQ9Y4I1 1855 aaKnown RBP16.29■□□□□ 0.2
PSMC4-206ENST00000601697 ZNF202O95125 648 aa16.29■□□□□ 0.2
PSMC4-206ENST00000601697 TNNT1P13805 278 aa16.29■□□□□ 0.2
PSMC4-206ENST00000601697 IARSP41252 1262 aaKnown RBP16.29■□□□□ 0.2
PSMC4-206ENST00000601697 CCDC144BQ3MJ40 725 aa16.29■□□□□ 0.2
PSMC4-206ENST00000601697 TMEM67Q5HYA8 995 aa16.29■□□□□ 0.2
PSMC4-206ENST00000601697 TPTE2Q6XPS3 522 aa16.29■□□□□ 0.2
PSMC4-206ENST00000601697 CCDC144CPQ8IYA2 1237 aa16.29■□□□□ 0.2
PSMC4-206ENST00000601697 NLRP3Q96P20 1036 aa16.29■□□□□ 0.2
PSMC4-206ENST00000601697 MTA3Q9BTC8 594 aa16.29■□□□□ 0.2
PSMC4-206ENST00000601697 NACAP1Q9BZK3 213 aa16.29■□□□□ 0.2
PSMC4-206ENST00000601697 WWC3Q9ULE0 1092 aa16.29■□□□□ 0.2
PSMC4-206ENST00000601697 CCDC69A6NI79 296 aa16.28■□□□□ 0.2
PSMC4-206ENST00000601697 B4E1Z4 1266 aa16.28■□□□□ 0.2
PSMC4-206ENST00000601697 KIF28PB7ZC32 967 aa16.28■□□□□ 0.2
PSMC4-206ENST00000601697 PFKFB1P16118 471 aa16.28■□□□□ 0.2
PSMC4-206ENST00000601697 RFC4P35249 363 aa16.28■□□□□ 0.2
PSMC4-206ENST00000601697 BCAMP50895 628 aa16.28■□□□□ 0.2
PSMC4-206ENST00000601697 SART3Q15020 963 aaKnown RBP16.28■□□□□ 0.2
PSMC4-206ENST00000601697 TXNRD1Q16881 649 aa16.28■□□□□ 0.2
PSMC4-206ENST00000601697 KRT40Q6A162 431 aa16.28■□□□□ 0.2
PSMC4-206ENST00000601697 VPS37DQ86XT2 251 aa16.28■□□□□ 0.2
PSMC4-206ENST00000601697 RAB11FIP4Q86YS3 637 aa16.28■□□□□ 0.2
PSMC4-206ENST00000601697 CCDC150Q8NCX0 1101 aa16.28■□□□□ 0.2
PSMC4-206ENST00000601697 KIF2AO00139 706 aaPredicted RBP16.27■□□□□ 0.2
PSMC4-206ENST00000601697 CTIFO43310 598 aaKnown RBP16.27■□□□□ 0.2
PSMC4-206ENST00000601697 SSRP1Q08945 709 aaKnown RBP16.27■□□□□ 0.2
PSMC4-206ENST00000601697 UBE4AQ14139 1066 aa16.27■□□□□ 0.2
PSMC4-206ENST00000601697 SLC27A3Q5K4L6 730 aa16.27■□□□□ 0.2
PSMC4-206ENST00000601697 AXDND1Q5T1B0 1012 aaPredicted RBP16.27■□□□□ 0.2
PSMC4-206ENST00000601697 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.2
PSMC4-206ENST00000601697 AMIGO3Q86WK7 504 aa16.27■□□□□ 0.2
PSMC4-206ENST00000601697 MICU3Q86XE3 530 aa16.27■□□□□ 0.2
PSMC4-206ENST00000601697 C16orf45Q96MC5 204 aaPredicted RBP16.27■□□□□ 0.2
PSMC4-206ENST00000601697 CCDC94Q9BW85 323 aaPredicted RBP16.27■□□□□ 0.2
PSMC4-206ENST00000601697 LY9Q9HBG7 655 aa16.27■□□□□ 0.2
PSMC4-206ENST00000601697 SLC12A7Q9Y666 1083 aa16.27■□□□□ 0.2
PSMC4-206ENST00000601697 IKBKBO14920 756 aa16.27■□□□□ 0.19
PSMC4-206ENST00000601697 MYO1BO43795 1136 aa16.27■□□□□ 0.19
PSMC4-206ENST00000601697 CUTAO60888 179 aa16.27■□□□□ 0.19
PSMC4-206ENST00000601697 SKILP12757 684 aa16.27■□□□□ 0.19
PSMC4-206ENST00000601697 SYKP43405 635 aa16.27■□□□□ 0.19
PSMC4-206ENST00000601697 SAFBQ15424 915 aaKnown RBP eCLIP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms