RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 DCP1AQ9NPI6 582 aaPredicted RBP16.18■□□□□ 0.18
IRF3-229ENST00000601373 ARPP21Q9UBL0 812 aaPredicted RBP16.18■□□□□ 0.18
IRF3-229ENST00000601373 ARFGEF1Q9Y6D6 1849 aa16.17■□□□□ 0.18
IRF3-229ENST00000601373 PRC1O43663 620 aa16.17■□□□□ 0.18
IRF3-229ENST00000601373 USP5P45974 858 aa16.17■□□□□ 0.18
IRF3-229ENST00000601373 NUCB2P80303 420 aa16.17■□□□□ 0.18
IRF3-229ENST00000601373 HDLBPQ00341 1268 aaKnown RBP16.17■□□□□ 0.18
IRF3-229ENST00000601373 COL13A1Q5TAT6 717 aaPredicted RBP16.17■□□□□ 0.18
IRF3-229ENST00000601373 HHIPL2Q6UWX4 724 aa16.17■□□□□ 0.18
IRF3-229ENST00000601373 AMOTL1Q8IY63 956 aa16.17■□□□□ 0.18
IRF3-229ENST00000601373 CERS5Q8N5B7 392 aa16.17■□□□□ 0.18
IRF3-229ENST00000601373 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
IRF3-229ENST00000601373 MTA3Q9BTC8 594 aa16.17■□□□□ 0.18
IRF3-229ENST00000601373 TPCN1Q9ULQ1 816 aa16.17■□□□□ 0.18
IRF3-229ENST00000601373 TTF2Q9UNY4 1162 aaKnown RBP16.17■□□□□ 0.18
IRF3-229ENST00000601373 BRCA1P38398 1863 aaKnown RBP16.16■□□□□ 0.18
IRF3-229ENST00000601373 MINDY4BA8MYZ0 360 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 CTDSPL2Q05D32 466 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 COL9A3Q14050 684 aaPredicted RBP16.16■□□□□ 0.18
IRF3-229ENST00000601373 ME3Q16798 604 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 DACT2Q5SW24 774 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 CTR9Q6PD62 1173 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 LARGE2Q8N3Y3 721 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 SH3RF3Q8TEJ3 882 aaPredicted RBP16.16■□□□□ 0.18
IRF3-229ENST00000601373 CNKSR2Q8WXI2 1034 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 BRF1Q92994 677 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 TMEM87BQ96K49 555 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 RNF181Q9P0P0 153 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 TIAM2Q8IVF5 1701 aa16.16■□□□□ 0.18
IRF3-229ENST00000601373 USP17L12C9JPN9 530 aa16.15■□□□□ 0.18
IRF3-229ENST00000601373 USP17L21D6R901 530 aa16.15■□□□□ 0.18
IRF3-229ENST00000601373 FGRP09769 529 aa16.15■□□□□ 0.18
IRF3-229ENST00000601373 PRELPP51888 382 aa16.15■□□□□ 0.18
IRF3-229ENST00000601373 EVCP57679 992 aa16.15■□□□□ 0.18
IRF3-229ENST00000601373 TNS4Q8IZW8 715 aa16.15■□□□□ 0.18
IRF3-229ENST00000601373 TEKT1Q969V4 418 aa16.15■□□□□ 0.18
IRF3-229ENST00000601373 ZNF274Q96GC6 653 aaPredicted RBP16.15■□□□□ 0.18
IRF3-229ENST00000601373 ANP32EQ9BTT0 268 aa16.15■□□□□ 0.18
IRF3-229ENST00000601373 DAGLAQ9Y4D2 1042 aa16.15■□□□□ 0.18
IRF3-229ENST00000601373 MYO3BQ8WXR4 1341 aa16.15■□□□□ 0.18
IRF3-229ENST00000601373 B4E1Z4 1266 aa16.14■□□□□ 0.17
IRF3-229ENST00000601373 PDIA4P13667 645 aaKnown RBP16.14■□□□□ 0.17
IRF3-229ENST00000601373 IARSP41252 1262 aaKnown RBP16.14■□□□□ 0.17
IRF3-229ENST00000601373 TEX11Q8IYF3 940 aa16.14■□□□□ 0.17
IRF3-229ENST00000601373 ESR2Q92731 530 aa16.14■□□□□ 0.17
IRF3-229ENST00000601373 LARP6Q9BRS8 491 aaKnown RBP16.14■□□□□ 0.17
IRF3-229ENST00000601373 RRAGCQ9HB90 399 aa16.14■□□□□ 0.17
IRF3-229ENST00000601373 MCM9Q9NXL9 1143 aa16.14■□□□□ 0.17
IRF3-229ENST00000601373 MKRN1Q9UHC7 482 aaKnown RBP16.14■□□□□ 0.17
IRF3-229ENST00000601373 SMC3Q9UQE7 1217 aa16.14■□□□□ 0.17
IRF3-229ENST00000601373 F8W031 263 aaPredicted RBP16.13■□□□□ 0.17
IRF3-229ENST00000601373 PFKFB2O60825 505 aa16.13■□□□□ 0.17
IRF3-229ENST00000601373 LARGE1O95461 756 aa16.13■□□□□ 0.17
IRF3-229ENST00000601373 ANTXR2P58335 489 aa16.13■□□□□ 0.17
IRF3-229ENST00000601373 SART3Q15020 963 aaKnown RBP16.13■□□□□ 0.17
IRF3-229ENST00000601373 CCDC83Q8IWF9 413 aa16.13■□□□□ 0.17
IRF3-229ENST00000601373 TGFBRAP1Q8WUH2 860 aa16.13■□□□□ 0.17
IRF3-229ENST00000601373 LRRC2Q9BYS8 371 aa16.13■□□□□ 0.17
IRF3-229ENST00000601373 TAOK3Q9H2K8 898 aa16.13■□□□□ 0.17
IRF3-229ENST00000601373 NEDD4P46934 1319 aa16.13■□□□□ 0.17
IRF3-229ENST00000601373 ORC4O43929 436 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 RHBDL3P58872 404 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 PDE4BQ07343 736 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 RAB3GAP1Q15042 981 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 C12orf60Q5U649 245 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 CHST3Q7LGC8 479 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 NIM1KQ8IY84 436 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 TMTC2Q8N394 836 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 ZDHHC15Q96MV8 337 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 LLPHQ9BRT6 129 aaKnown RBP16.12■□□□□ 0.17
IRF3-229ENST00000601373 MXD3Q9BW11 206 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 KCNQ5Q9NR82 932 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 ZNF277Q9NRM2 450 aaPredicted RBP16.12■□□□□ 0.17
IRF3-229ENST00000601373 TOMM22Q9NS69 142 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 ZSWIM5Q9P217 1185 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 SERPINA10Q9UK55 444 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 ZNRF3Q9ULT6 936 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 ANGEL1Q9UNK9 670 aaKnown RBP16.12■□□□□ 0.17
IRF3-229ENST00000601373 LTBP3Q9NS15 1303 aa16.12■□□□□ 0.17
IRF3-229ENST00000601373 ERICH2A1L162 156 aa16.11■□□□□ 0.17
IRF3-229ENST00000601373 YDJCA8MPS7 323 aa16.11■□□□□ 0.17
IRF3-229ENST00000601373 KDM4AO75164 1064 aa16.11■□□□□ 0.17
IRF3-229ENST00000601373 VEGFAP15692 232 aaPredicted RBP16.11■□□□□ 0.17
IRF3-229ENST00000601373 LIFRP42702 1097 aa16.11■□□□□ 0.17
IRF3-229ENST00000601373 CRKP46108 304 aa16.11■□□□□ 0.17
IRF3-229ENST00000601373 HTRA3P83110 453 aa16.11■□□□□ 0.17
IRF3-229ENST00000601373 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
IRF3-229ENST00000601373 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
IRF3-229ENST00000601373 CYB5R4Q7L1T6 521 aa16.11■□□□□ 0.17
IRF3-229ENST00000601373 NECAB1Q8N987 351 aa16.11■□□□□ 0.17
IRF3-229ENST00000601373 GTF3C6Q969F1 213 aa16.11■□□□□ 0.17
IRF3-229ENST00000601373 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
IRF3-229ENST00000601373 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
IRF3-229ENST00000601373 SCN9AQ15858 1988 aa16.1■□□□□ 0.17
IRF3-229ENST00000601373 SH2B2O14492 632 aaPredicted RBP16.1■□□□□ 0.17
IRF3-229ENST00000601373 IFIT3O14879 490 aaKnown RBP16.1■□□□□ 0.17
IRF3-229ENST00000601373 DHX16O60231 1041 aaKnown RBP16.1■□□□□ 0.17
IRF3-229ENST00000601373 POLR3DP05423 398 aaPredicted RBP16.1■□□□□ 0.17
IRF3-229ENST00000601373 VIL1P09327 827 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms