RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 HMGN5P82970 282 aaKnown RBP23.55■■□□□ 1.36
PNKP-214ENST00000600573 DOK7Q18PE1 504 aa23.55■■□□□ 1.36
PNKP-214ENST00000600573 SLX4Q8IY92 1834 aa23.54■■□□□ 1.36
PNKP-214ENST00000600573 SNED1Q8TER0 1413 aa23.54■■□□□ 1.36
PNKP-214ENST00000600573 USP17L12C9JPN9 530 aa23.54■■□□□ 1.36
PNKP-214ENST00000600573 USP17L21D6R901 530 aa23.54■■□□□ 1.36
PNKP-214ENST00000600573 SH2B2O14492 632 aaPredicted RBP23.54■■□□□ 1.36
PNKP-214ENST00000600573 DPEP1P16444 411 aa23.54■■□□□ 1.36
PNKP-214ENST00000600573 GRIK5Q16478 980 aa23.54■■□□□ 1.36
PNKP-214ENST00000600573 CHST3Q7LGC8 479 aa23.54■■□□□ 1.36
PNKP-214ENST00000600573 SGMS1Q86VZ5 419 aa23.54■■□□□ 1.36
PNKP-214ENST00000600573 ZSWIM5Q9P217 1185 aa23.54■■□□□ 1.36
PNKP-214ENST00000600573 NEDD4P46934 1319 aa23.53■■□□□ 1.36
PNKP-214ENST00000600573 ERICH2A1L162 156 aa23.53■■□□□ 1.36
PNKP-214ENST00000600573 KCNA3P22001 575 aa23.53■■□□□ 1.36
PNKP-214ENST00000600573 BTDP43251 543 aa23.53■■□□□ 1.36
PNKP-214ENST00000600573 DIXDC1Q155Q3 683 aa23.53■■□□□ 1.36
PNKP-214ENST00000600573 PIM2Q9P1W9 311 aa23.53■■□□□ 1.36
PNKP-214ENST00000600573 MKRN1Q9UHC7 482 aaKnown RBP23.53■■□□□ 1.36
PNKP-214ENST00000600573 ATP6V1DQ9Y5K8 247 aa23.53■■□□□ 1.36
PNKP-214ENST00000600573 DLEC1Q9Y238 1755 aa23.52■■□□□ 1.36
PNKP-214ENST00000600573 C21orf2O43822 256 aa23.52■■□□□ 1.36
PNKP-214ENST00000600573 KDM4AO75164 1064 aa23.52■■□□□ 1.36
PNKP-214ENST00000600573 ZBTB7AO95365 584 aa23.52■■□□□ 1.36
PNKP-214ENST00000600573 HDLBPQ00341 1268 aaKnown RBP23.52■■□□□ 1.36
PNKP-214ENST00000600573 PDE4BQ07343 736 aa23.52■■□□□ 1.36
PNKP-214ENST00000600573 SCRN1Q12765 414 aa23.52■■□□□ 1.36
PNKP-214ENST00000600573 STK3Q13188 491 aa23.52■■□□□ 1.36
PNKP-214ENST00000600573 HHIPL2Q6UWX4 724 aa23.52■■□□□ 1.36
PNKP-214ENST00000600573 CYB5R4Q7L1T6 521 aa23.52■■□□□ 1.36
PNKP-214ENST00000600573 IGDCC4Q8TDY8 1250 aa23.52■■□□□ 1.36
PNKP-214ENST00000600573 ORC4O43929 436 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 R3HDM1Q15032 1099 aaKnown RBP23.51■■□□□ 1.35
PNKP-214ENST00000600573 SMARCC2Q8TAQ2 1214 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 SH3RF3Q8TEJ3 882 aaPredicted RBP23.51■■□□□ 1.35
PNKP-214ENST00000600573 FBXW7Q969H0 707 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 KLF18A0A0U1RQI7 1052 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 USP17L3A6NCW0 530 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 USP17L4A6NCW7 530 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 ECE2O60344 883 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 RCAN1P53805 252 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 KLHL40Q2TBA0 621 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 TMEM67Q5HYA8 995 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 USP17L1Q7RTZ2 530 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 ZNF287Q9HBT7 754 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 TOMM22Q9NS69 142 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 LMBRD1Q9NUN5 540 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 MCM9Q9NXL9 1143 aa23.51■■□□□ 1.35
PNKP-214ENST00000600573 KIF13BQ9NQT8 1826 aa23.5■■□□□ 1.35
PNKP-214ENST00000600573 IFIT3O14879 490 aaKnown RBP23.5■■□□□ 1.35
PNKP-214ENST00000600573 F13A1P00488 732 aa23.5■■□□□ 1.35
PNKP-214ENST00000600573 LARP1BQ659C4 914 aaKnown RBP23.5■■□□□ 1.35
PNKP-214ENST00000600573 SYNE3Q6ZMZ3 975 aa23.5■■□□□ 1.35
PNKP-214ENST00000600573 RGS22Q8NE09 1264 aa23.5■■□□□ 1.35
PNKP-214ENST00000600573 ZNF219Q9P2Y4 722 aaPredicted RBP23.5■■□□□ 1.35
PNKP-214ENST00000600573 TTF2Q9UNY4 1162 aaKnown RBP23.5■■□□□ 1.35
PNKP-214ENST00000600573 CD2APQ9Y5K6 639 aa23.5■■□□□ 1.35
PNKP-214ENST00000600573 C12orf60Q5U649 245 aa23.49■■□□□ 1.35
PNKP-214ENST00000600573 TEX11Q8IYF3 940 aa23.49■■□□□ 1.35
PNKP-214ENST00000600573 DBNDD1Q9H9R9 158 aa23.49■■□□□ 1.35
PNKP-214ENST00000600573 MTMR6Q9Y217 621 aa23.49■■□□□ 1.35
PNKP-214ENST00000600573 ATF5Q9Y2D1 282 aaPredicted RBP23.49■■□□□ 1.35
PNKP-214ENST00000600573 TCHHQ07283 1943 aa23.49■■□□□ 1.35
PNKP-214ENST00000600573 RRP12Q5JTH9 1297 aaKnown RBP23.48■■□□□ 1.35
PNKP-214ENST00000600573 IQCA1Q86XH1 822 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 CERS5Q8N5B7 392 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 TEKT1Q969V4 418 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 UBAC1Q9BSL1 405 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 LY9Q9HBG7 655 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.48■■□□□ 1.35
PNKP-214ENST00000600573 DDX49Q9Y6V7 483 aaKnown RBP23.48■■□□□ 1.35
PNKP-214ENST00000600573 LAMB1P07942 1786 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 PPIP5K2O43314 1243 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 RHBDL3P58872 404 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 WTAPQ15007 396 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 PPP2R5BQ15173 497 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 CCDC178Q5BJE1 867 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 DACT2Q5SW24 774 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 CPLX2Q6PUV4 134 aaKnown RBP23.48■■□□□ 1.35
PNKP-214ENST00000600573 FAM184AQ8NB25 1140 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 TGFBRAP1Q8WUH2 860 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 BRPF3Q9ULD4 1205 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 NAP1L2Q9ULW6 460 aaPredicted RBP23.48■■□□□ 1.35
PNKP-214ENST00000600573 DAGLAQ9Y4D2 1042 aa23.48■■□□□ 1.35
PNKP-214ENST00000600573 CCDC69A6NI79 296 aa23.47■■□□□ 1.35
PNKP-214ENST00000600573 GOLGA8BA8MQT2 603 aa23.47■■□□□ 1.35
PNKP-214ENST00000600573 CDKL5O76039 1030 aa23.47■■□□□ 1.35
PNKP-214ENST00000600573 AOC3Q16853 763 aa23.47■■□□□ 1.35
PNKP-214ENST00000600573 NFXL1Q6ZNB6 911 aa23.47■■□□□ 1.35
PNKP-214ENST00000600573 GZF1Q9H116 711 aaPredicted RBP23.47■■□□□ 1.35
PNKP-214ENST00000600573 TACC3Q9Y6A5 838 aa23.47■■□□□ 1.35
PNKP-214ENST00000600573 ROBO3Q96MS0 1386 aa23.46■■□□□ 1.35
PNKP-214ENST00000600573 VPS37CA5D8V6 355 aaPredicted RBP23.46■■□□□ 1.35
PNKP-214ENST00000600573 DALRD3Q5D0E6 543 aaKnown RBP23.46■■□□□ 1.35
PNKP-214ENST00000600573 NSUN7Q8NE18 718 aaKnown RBP23.46■■□□□ 1.35
PNKP-214ENST00000600573 INCENPQ9NQS7 918 aa23.46■■□□□ 1.35
PNKP-214ENST00000600573 SLC12A7Q9Y666 1083 aa23.46■■□□□ 1.35
PNKP-214ENST00000600573 MYO3BQ8WXR4 1341 aa23.46■■□□□ 1.35
PNKP-214ENST00000600573 ZBTB43O43298 467 aa23.45■■□□□ 1.34
PNKP-214ENST00000600573 PRPF40AO75400 957 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms