RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CTU1Q7Z7A3 348 aaKnown RBP12.88□□□□□ -0.35
CCDC9-203ENST00000596938 RHPN1Q8TCX5 695 aa12.88□□□□□ -0.35
CCDC9-203ENST00000596938 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
CCDC9-203ENST00000596938 TLR7Q9NYK1 1049 aaKnown RBP12.88□□□□□ -0.35
CCDC9-203ENST00000596938 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
CCDC9-203ENST00000596938 PHF20L1A8MW92 1017 aa12.87□□□□□ -0.35
CCDC9-203ENST00000596938 FKTNO75072 461 aa12.87□□□□□ -0.35
CCDC9-203ENST00000596938 RAB11FIP3O75154 756 aa12.87□□□□□ -0.35
CCDC9-203ENST00000596938 BAG3O95817 575 aa12.87□□□□□ -0.35
CCDC9-203ENST00000596938 INPP5BP32019 993 aa12.87□□□□□ -0.35
CCDC9-203ENST00000596938 PPIL2Q13356 520 aa12.87□□□□□ -0.35
CCDC9-203ENST00000596938 NOL9Q5SY16 702 aaKnown RBP12.87□□□□□ -0.35
CCDC9-203ENST00000596938 C20orf194Q5TEA3 1177 aa12.87□□□□□ -0.35
CCDC9-203ENST00000596938 NAA16Q6N069 864 aaPredicted RBP12.87□□□□□ -0.35
CCDC9-203ENST00000596938 AACSQ86V21 672 aa12.87□□□□□ -0.35
CCDC9-203ENST00000596938 BRI3BPQ8WY22 251 aa12.87□□□□□ -0.35
CCDC9-203ENST00000596938 KIF1BPQ96EK5 621 aa12.87□□□□□ -0.35
CCDC9-203ENST00000596938 DDX4Q9NQI0 724 aaKnown RBP12.87□□□□□ -0.35
CCDC9-203ENST00000596938 ATRNL1Q5VV63 1379 aa12.86□□□□□ -0.35
CCDC9-203ENST00000596938 CCL15-CCL14A0A0B4J2E2 113 aa12.86□□□□□ -0.35
CCDC9-203ENST00000596938 DDTLA6NHG4 134 aaPredicted RBP12.86□□□□□ -0.35
CCDC9-203ENST00000596938 IRF6O14896 467 aa12.86□□□□□ -0.35
CCDC9-203ENST00000596938 TBC1D12O60347 775 aa12.86□□□□□ -0.35
CCDC9-203ENST00000596938 CETPP11597 493 aa12.86□□□□□ -0.35
CCDC9-203ENST00000596938 SNAPC2Q13487 334 aa12.86□□□□□ -0.35
CCDC9-203ENST00000596938 CCL15Q16663 113 aa12.86□□□□□ -0.35
CCDC9-203ENST00000596938 TMED8Q6PL24 325 aaPredicted RBP12.86□□□□□ -0.35
CCDC9-203ENST00000596938 ZSCAN29Q8IWY8 852 aaPredicted RBP12.86□□□□□ -0.35
CCDC9-203ENST00000596938 CLASRPQ8N2M8 674 aaKnown RBP12.86□□□□□ -0.35
CCDC9-203ENST00000596938 IL1RAPL2Q9NP60 686 aa12.86□□□□□ -0.35
CCDC9-203ENST00000596938 ZCCHC17Q9NP64 241 aaKnown RBP12.86□□□□□ -0.35
CCDC9-203ENST00000596938 CCDC85CA6NKD9 419 aa12.85□□□□□ -0.35
CCDC9-203ENST00000596938 PLCG2P16885 1265 aa12.85□□□□□ -0.35
CCDC9-203ENST00000596938 CRHR2Q13324 411 aa12.85□□□□□ -0.35
CCDC9-203ENST00000596938 PICALMQ13492 652 aa12.85□□□□□ -0.35
CCDC9-203ENST00000596938 NOL10Q9BSC4 688 aaKnown RBP12.85□□□□□ -0.35
CCDC9-203ENST00000596938 PIH1D3Q9NQM4 214 aaKnown RBP12.85□□□□□ -0.35
CCDC9-203ENST00000596938 KCNH4Q9UQ05 1017 aa12.85□□□□□ -0.35
CCDC9-203ENST00000596938 CXCL11O14625 94 aa12.84□□□□□ -0.35
CCDC9-203ENST00000596938 CTNND1O60716 968 aaKnown RBP12.84□□□□□ -0.35
CCDC9-203ENST00000596938 TEX11Q8IYF3 940 aa12.84□□□□□ -0.35
CCDC9-203ENST00000596938 SH3RF3Q8TEJ3 882 aaPredicted RBP12.84□□□□□ -0.35
CCDC9-203ENST00000596938 ZFYVE28Q9HCC9 887 aa12.84□□□□□ -0.35
CCDC9-203ENST00000596938 BTBD19C9JJ37 291 aa12.83□□□□□ -0.36
CCDC9-203ENST00000596938 IFIT2P09913 472 aaKnown RBP12.83□□□□□ -0.36
CCDC9-203ENST00000596938 ADGRA1Q86SQ6 560 aa12.83□□□□□ -0.36
CCDC9-203ENST00000596938 CERS3Q8IU89 383 aa12.83□□□□□ -0.36
CCDC9-203ENST00000596938 SCYL3Q8IZE3 742 aa12.83□□□□□ -0.36
CCDC9-203ENST00000596938 FAM43AQ8N2R8 423 aa12.83□□□□□ -0.36
CCDC9-203ENST00000596938 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCDC9-203ENST00000596938 OSBPL5Q9H0X9 879 aaPredicted RBP12.83□□□□□ -0.36
CCDC9-203ENST00000596938 DHX36Q9H2U1 1008 aaKnown RBP12.83□□□□□ -0.36
CCDC9-203ENST00000596938 PICK1Q9NRD5 415 aa12.83□□□□□ -0.36
CCDC9-203ENST00000596938 AATFQ9NY61 560 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCDC9-203ENST00000596938 AKAP11Q9UKA4 1901 aa12.82□□□□□ -0.36
CCDC9-203ENST00000596938 CASP8AP2Q9UKL3 1982 aa12.82□□□□□ -0.36
CCDC9-203ENST00000596938 IDH1O75874 414 aaKnown RBP12.82□□□□□ -0.36
CCDC9-203ENST00000596938 PTPRAP18433 802 aa12.82□□□□□ -0.36
CCDC9-203ENST00000596938 CYP7A1P22680 504 aa12.82□□□□□ -0.36
CCDC9-203ENST00000596938 RGS19P49795 217 aa12.82□□□□□ -0.36
CCDC9-203ENST00000596938 SP3Q02447 781 aa12.82□□□□□ -0.36
CCDC9-203ENST00000596938 MAP3K12Q12852 859 aa12.82□□□□□ -0.36
CCDC9-203ENST00000596938 TTF1Q15361 905 aaPredicted RBP12.82□□□□□ -0.36
CCDC9-203ENST00000596938 TAF1CQ15572 869 aaPredicted RBP12.82□□□□□ -0.36
CCDC9-203ENST00000596938 ERO1AQ96HE7 468 aa12.82□□□□□ -0.36
CCDC9-203ENST00000596938 ANTXR1Q9H6X2 564 aa12.82□□□□□ -0.36
CCDC9-203ENST00000596938 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC9-203ENST00000596938 PI4KBQ9UBF8 816 aa12.82□□□□□ -0.36
CCDC9-203ENST00000596938 ZHX2Q9Y6X8 837 aa12.82□□□□□ -0.36
CCDC9-203ENST00000596938 COL2A1P02458 1487 aaPredicted RBP12.82□□□□□ -0.36
CCDC9-203ENST00000596938 APBB1O00213 710 aa12.81□□□□□ -0.36
CCDC9-203ENST00000596938 TLR2O60603 784 aa12.81□□□□□ -0.36
CCDC9-203ENST00000596938 MOGSQ13724 837 aa12.81□□□□□ -0.36
CCDC9-203ENST00000596938 FBXO46Q6PJ61 603 aaPredicted RBP12.81□□□□□ -0.36
CCDC9-203ENST00000596938 ANKRD23Q86SG2 305 aa12.81□□□□□ -0.36
CCDC9-203ENST00000596938 METTL16Q86W50 562 aaKnown RBP12.81□□□□□ -0.36
CCDC9-203ENST00000596938 FOXP4Q8IVH2 680 aaPredicted RBP12.81□□□□□ -0.36
CCDC9-203ENST00000596938 TGFBRAP1Q8WUH2 860 aa12.81□□□□□ -0.36
CCDC9-203ENST00000596938 HERC5Q9UII4 1024 aaKnown RBP12.81□□□□□ -0.36
CCDC9-203ENST00000596938 AFG3L2Q9Y4W6 797 aa12.81□□□□□ -0.36
CCDC9-203ENST00000596938 MYH13Q9UKX3 1938 aa12.81□□□□□ -0.36
CCDC9-203ENST00000596938 SLURP2P0DP57 97 aa12.8□□□□□ -0.36
CCDC9-203ENST00000596938 ATP5JP18859 108 aa12.8□□□□□ -0.36
CCDC9-203ENST00000596938 ARHGEF6Q15052 776 aa12.8□□□□□ -0.36
CCDC9-203ENST00000596938 MAGEB6Q8N7X4 407 aa12.8□□□□□ -0.36
CCDC9-203ENST00000596938 LRRCC1Q9C099 1032 aa12.8□□□□□ -0.36
CCDC9-203ENST00000596938 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
CCDC9-203ENST00000596938 NDUFB9Q9Y6M9 179 aa12.8□□□□□ -0.36
CCDC9-203ENST00000596938 A0A0G2JLL6 359 aaPredicted RBP12.79□□□□□ -0.36
CCDC9-203ENST00000596938 PDHXO00330 501 aa12.79□□□□□ -0.36
CCDC9-203ENST00000596938 CAP2P40123 477 aa12.79□□□□□ -0.36
CCDC9-203ENST00000596938 DYNLL1P63167 89 aaKnown RBP12.79□□□□□ -0.36
CCDC9-203ENST00000596938 FASTKD5Q7L8L6 764 aaKnown RBP12.79□□□□□ -0.36
CCDC9-203ENST00000596938 OTOP1Q7RTM1 612 aa12.79□□□□□ -0.36
CCDC9-203ENST00000596938 PRRT2Q7Z6L0 340 aaPredicted RBP12.79□□□□□ -0.36
CCDC9-203ENST00000596938 MAPKAPK5Q8IW41 473 aa12.79□□□□□ -0.36
CCDC9-203ENST00000596938 DCTPP1Q9H773 170 aa12.79□□□□□ -0.36
CCDC9-203ENST00000596938 TRIM17Q9Y577 477 aa12.79□□□□□ -0.36
CCDC9-203ENST00000596938 FLT1P17948 1338 aa12.79□□□□□ -0.36
CCDC9-203ENST00000596938 MYH2Q9UKX2 1941 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms