RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 GPAT2Q6NUI2 795 aa19.72■□□□□ 0.75
LINC02560-201ENST00000596379 SCYL3Q8IZE3 742 aa19.72■□□□□ 0.75
LINC02560-201ENST00000596379 FAM163AQ96GL9 167 aaPredicted RBP19.72■□□□□ 0.75
LINC02560-201ENST00000596379 NEUROD6Q96NK8 337 aa19.72■□□□□ 0.75
LINC02560-201ENST00000596379 SRRDQ9UH36 339 aa19.72■□□□□ 0.75
LINC02560-201ENST00000596379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.72■□□□□ 0.75
LINC02560-201ENST00000596379 BRCA2P51587 3418 aa19.72■□□□□ 0.75
LINC02560-201ENST00000596379 PDS5AQ29RF7 1337 aaKnown RBP19.72■□□□□ 0.75
LINC02560-201ENST00000596379 DDTLA6NHG4 134 aaPredicted RBP19.71■□□□□ 0.75
LINC02560-201ENST00000596379 SLURP2P0DP57 97 aa19.71■□□□□ 0.75
LINC02560-201ENST00000596379 CYP2C8P10632 490 aa19.71■□□□□ 0.75
LINC02560-201ENST00000596379 HOXD10P28358 340 aa19.71■□□□□ 0.75
LINC02560-201ENST00000596379 BTDP43251 543 aa19.71■□□□□ 0.75
LINC02560-201ENST00000596379 MAP3K10Q02779 954 aa19.71■□□□□ 0.75
LINC02560-201ENST00000596379 PICALMQ13492 652 aa19.71■□□□□ 0.75
LINC02560-201ENST00000596379 MTX1Q13505 466 aa19.71■□□□□ 0.75
LINC02560-201ENST00000596379 MVPQ14764 893 aaKnown RBP19.71■□□□□ 0.75
LINC02560-201ENST00000596379 DDX4Q9NQI0 724 aaKnown RBP19.71■□□□□ 0.75
LINC02560-201ENST00000596379 PICK1Q9NRD5 415 aa19.71■□□□□ 0.75
LINC02560-201ENST00000596379 PTPRAP18433 802 aa19.7■□□□□ 0.74
LINC02560-201ENST00000596379 OSBPP22059 807 aa19.7■□□□□ 0.74
LINC02560-201ENST00000596379 HABP4Q5JVS0 413 aaKnown RBP19.7■□□□□ 0.74
LINC02560-201ENST00000596379 ERICH6Q7L0X2 663 aa19.7■□□□□ 0.74
LINC02560-201ENST00000596379 PARK7Q99497 189 aaKnown RBP19.7■□□□□ 0.74
LINC02560-201ENST00000596379 AFG3L2Q9Y4W6 797 aa19.7■□□□□ 0.74
LINC02560-201ENST00000596379 RFX7Q2KHR2 1363 aa19.7■□□□□ 0.74
LINC02560-201ENST00000596379 CCER2I3L3R5 266 aa19.69■□□□□ 0.74
LINC02560-201ENST00000596379 BCRP11274 1271 aa19.69■□□□□ 0.74
LINC02560-201ENST00000596379 MECOMQ03112 1051 aa19.69■□□□□ 0.74
LINC02560-201ENST00000596379 MTFR1Q15390 333 aa19.69■□□□□ 0.74
LINC02560-201ENST00000596379 FASTKD5Q7L8L6 764 aaKnown RBP19.69■□□□□ 0.74
LINC02560-201ENST00000596379 RAET1EQ8TD07 263 aa19.69■□□□□ 0.74
LINC02560-201ENST00000596379 MROH7-TTC4A0A0A0MT08 1334 aa19.69■□□□□ 0.74
LINC02560-201ENST00000596379 GPR75-ASB3A0A0A6YYF3 556 aa19.68■□□□□ 0.74
LINC02560-201ENST00000596379 A0A0G2JLL6 359 aaPredicted RBP19.68■□□□□ 0.74
LINC02560-201ENST00000596379 CTNND1O60716 968 aaKnown RBP19.68■□□□□ 0.74
LINC02560-201ENST00000596379 GADL1Q6ZQY3 521 aa19.68■□□□□ 0.74
LINC02560-201ENST00000596379 PRRT2Q7Z6L0 340 aaPredicted RBP19.68■□□□□ 0.74
LINC02560-201ENST00000596379 ZNF384Q8TF68 577 aa19.68■□□□□ 0.74
LINC02560-201ENST00000596379 HMG20BQ9P0W2 317 aa19.68■□□□□ 0.74
LINC02560-201ENST00000596379 TNNQ9UQP3 1299 aa19.68■□□□□ 0.74
LINC02560-201ENST00000596379 MYPNQ86TC9 1320 aa19.68■□□□□ 0.74
LINC02560-201ENST00000596379 MGAMO43451 1857 aa19.67■□□□□ 0.74
LINC02560-201ENST00000596379 IPO8O15397 1037 aaKnown RBP19.67■□□□□ 0.74
LINC02560-201ENST00000596379 TRIM27P14373 513 aa19.67■□□□□ 0.74
LINC02560-201ENST00000596379 GRK4P32298 578 aa19.67■□□□□ 0.74
LINC02560-201ENST00000596379 RHBDL3P58872 404 aa19.67■□□□□ 0.74
LINC02560-201ENST00000596379 GORABQ5T7V8 394 aa19.67■□□□□ 0.74
LINC02560-201ENST00000596379 PI16Q6UXB8 463 aa19.67■□□□□ 0.74
LINC02560-201ENST00000596379 TBC1D9Q6ZT07 1266 aa19.67■□□□□ 0.74
LINC02560-201ENST00000596379 BCAR3O75815 825 aa19.66■□□□□ 0.74
LINC02560-201ENST00000596379 GNAI2P04899 355 aa19.66■□□□□ 0.74
LINC02560-201ENST00000596379 FCGRTP55899 365 aa19.66■□□□□ 0.74
LINC02560-201ENST00000596379 SPATA5Q8NB90 893 aa19.66■□□□□ 0.74
LINC02560-201ENST00000596379 FRAT1Q92837 279 aaPredicted RBP19.66■□□□□ 0.74
LINC02560-201ENST00000596379 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.66■□□□□ 0.74
LINC02560-201ENST00000596379 PHIPQ8WWQ0 1821 aa19.66■□□□□ 0.74
LINC02560-201ENST00000596379 DOCK1Q14185 1865 aa19.65■□□□□ 0.74
LINC02560-201ENST00000596379 PTPRFP10586 1907 aa19.65■□□□□ 0.74
LINC02560-201ENST00000596379 PNMA6EA0A0J9YXQ4 647 aa19.65■□□□□ 0.74
LINC02560-201ENST00000596379 LDHCP07864 332 aa19.65■□□□□ 0.74
LINC02560-201ENST00000596379 PRKCZQ05513 592 aa19.65■□□□□ 0.74
LINC02560-201ENST00000596379 G3BP1Q13283 466 aaKnown RBP eCLIP19.65■□□□□ 0.74
LINC02560-201ENST00000596379 ATF7IPQ6VMQ6 1270 aa19.65■□□□□ 0.74
LINC02560-201ENST00000596379 NSUN4Q96CB9 384 aaKnown RBP19.65■□□□□ 0.74
LINC02560-201ENST00000596379 TRIM75PA6NK02 468 aa19.64■□□□□ 0.73
LINC02560-201ENST00000596379 TBC1D12O60347 775 aa19.64■□□□□ 0.73
LINC02560-201ENST00000596379 NPM3O75607 178 aaKnown RBP19.64■□□□□ 0.73
LINC02560-201ENST00000596379 GSTO1P78417 241 aa19.64■□□□□ 0.73
LINC02560-201ENST00000596379 CCDC84Q86UT8 332 aaPredicted RBP19.64■□□□□ 0.73
LINC02560-201ENST00000596379 CLUAP1Q96AJ1 413 aa19.64■□□□□ 0.73
LINC02560-201ENST00000596379 RAI14Q9P0K7 980 aa19.64■□□□□ 0.73
LINC02560-201ENST00000596379 BIN2Q9UBW5 565 aaPredicted RBP19.64■□□□□ 0.73
LINC02560-201ENST00000596379 GABRQQ9UN88 632 aa19.64■□□□□ 0.73
LINC02560-201ENST00000596379 SLC45A1Q9Y2W3 748 aa19.64■□□□□ 0.73
LINC02560-201ENST00000596379 FAM196BA6NMK8 535 aa19.63■□□□□ 0.73
LINC02560-201ENST00000596379 CCL5P13501 91 aa19.63■□□□□ 0.73
LINC02560-201ENST00000596379 ARID4AP29374 1257 aaPredicted RBP19.63■□□□□ 0.73
LINC02560-201ENST00000596379 SHISA4Q96DD7 197 aa19.63■□□□□ 0.73
LINC02560-201ENST00000596379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.63■□□□□ 0.73
LINC02560-201ENST00000596379 MCAMP43121 646 aa19.62■□□□□ 0.73
LINC02560-201ENST00000596379 NKX2-3Q8TAU0 364 aa19.62■□□□□ 0.73
LINC02560-201ENST00000596379 RNF208Q9H0X6 261 aa19.62■□□□□ 0.73
LINC02560-201ENST00000596379 H0YGN5 161 aa19.61■□□□□ 0.73
LINC02560-201ENST00000596379 MAP4K4O95819 1239 aaPredicted RBP19.61■□□□□ 0.73
LINC02560-201ENST00000596379 GJB1P08034 283 aa19.61■□□□□ 0.73
LINC02560-201ENST00000596379 UBXN2AP68543 259 aa19.61■□□□□ 0.73
LINC02560-201ENST00000596379 SMCR8Q8TEV9 937 aaPredicted RBP19.61■□□□□ 0.73
LINC02560-201ENST00000596379 OSBPL5Q9H0X9 879 aaPredicted RBP19.61■□□□□ 0.73
LINC02560-201ENST00000596379 LRP2BPQ9P2M1 347 aa19.61■□□□□ 0.73
LINC02560-201ENST00000596379 COLQQ9Y215 455 aaPredicted RBP19.61■□□□□ 0.73
LINC02560-201ENST00000596379 CEP290O15078 2479 aa19.61■□□□□ 0.73
LINC02560-201ENST00000596379 DOCK3Q8IZD9 2030 aa19.6■□□□□ 0.73
LINC02560-201ENST00000596379 UQCRFS1P1P0C7P4 283 aa19.6■□□□□ 0.73
LINC02560-201ENST00000596379 GJA8P48165 433 aa19.6■□□□□ 0.73
LINC02560-201ENST00000596379 FLT3LGP49771 235 aa19.6■□□□□ 0.73
LINC02560-201ENST00000596379 TREML2Q5T2D2 321 aa19.6■□□□□ 0.73
LINC02560-201ENST00000596379 TMEM57Q8N5G2 664 aa19.6■□□□□ 0.73
LINC02560-201ENST00000596379 SLAIN1Q8ND83 568 aa19.6■□□□□ 0.73
LINC02560-201ENST00000596379 AGTPBP1Q9UPW5 1226 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms